{"id":"https://openalex.org/W2982279653","doi":"https://doi.org/10.3390/jimaging5110083","title":"Numerical Simulation of a Scanning Illumination System for Deep Tissue Fluorescence Imaging","display_name":"Numerical Simulation of a Scanning Illumination System for Deep Tissue Fluorescence Imaging","publication_year":2019,"publication_date":"2019-10-24","ids":{"openalex":"https://openalex.org/W2982279653","doi":"https://doi.org/10.3390/jimaging5110083","mag":"2982279653","pmid":"https://pubmed.ncbi.nlm.nih.gov/34460506"},"language":"en","primary_location":{"id":"doi:10.3390/jimaging5110083","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5110083","pdf_url":"https://www.mdpi.com/2313-433X/5/11/83/pdf","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2313-433X/5/11/83/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079838225","display_name":"Qimei Zhang","orcid":"https://orcid.org/0000-0001-5811-8034"},"institutions":[{"id":"https://openalex.org/I52590639","display_name":"Nottingham Trent University","ror":"https://ror.org/04xyxjd90","country_code":"GB","type":"education","lineage":["https://openalex.org/I52590639"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Qimei Zhang","raw_affiliation_strings":["Department of Engineering, Nottingham Trent University, Nottingham NG118PR, UK"],"raw_orcid":"https://orcid.org/0000-0001-5811-8034","affiliations":[{"raw_affiliation_string":"Department of Engineering, Nottingham Trent University, Nottingham NG118PR, UK","institution_ids":["https://openalex.org/I52590639"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033723598","display_name":"Anna M. Grabowska","orcid":"https://orcid.org/0000-0003-1507-921X"},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Anna M. Grabowska","raw_affiliation_strings":["School of Medicine, Division of Cancer and Stem Cells, University of Nottingham, Nottingham NG72RD, UK"],"raw_orcid":"https://orcid.org/0000-0003-1507-921X","affiliations":[{"raw_affiliation_string":"School of Medicine, Division of Cancer and Stem Cells, University of Nottingham, Nottingham NG72RD, UK","institution_ids":["https://openalex.org/I142263535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101846816","display_name":"Philip A. Clarke","orcid":"https://orcid.org/0000-0002-9042-4856"},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Philip A. Clarke","raw_affiliation_strings":["School of Medicine, Division of Cancer and Stem Cells, University of Nottingham, Nottingham NG72RD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine, Division of Cancer and Stem Cells, University of Nottingham, Nottingham NG72RD, UK","institution_ids":["https://openalex.org/I142263535"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009991130","display_name":"Stephen P. Morgan","orcid":"https://orcid.org/0000-0003-4069-3801"},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Stephen P. Morgan","raw_affiliation_strings":["Optics and Photonics Group, Faculty of Engineering, University of Nottingham, Nottingham NG72RD, UK"],"raw_orcid":"https://orcid.org/0000-0003-4069-3801","affiliations":[{"raw_affiliation_string":"Optics and Photonics Group, Faculty of Engineering, University of Nottingham, Nottingham NG72RD, UK","institution_ids":["https://openalex.org/I142263535"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5009991130"],"corresponding_institution_ids":["https://openalex.org/I142263535"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":0.0,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.18697757,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"5","issue":"11","first_page":"83","last_page":"83"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10977","display_name":"Optical Imaging and Spectroscopy Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10977","display_name":"Optical Imaging and Spectroscopy Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12015","display_name":"Photoacoustic and Ultrasonic Imaging","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11196","display_name":"Non-Invasive Vital Sign Monitoring","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/radiance","display_name":"Radiance","score":0.8956161737442017},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.7404955625534058},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.6611177921295166},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.6542245149612427},{"id":"https://openalex.org/keywords/image-resolution","display_name":"Image resolution","score":0.6098874807357788},{"id":"https://openalex.org/keywords/autofluorescence","display_name":"Autofluorescence","score":0.5878786444664001},{"id":"https://openalex.org/keywords/wavelength","display_name":"Wavelength","score":0.5789703726768494},{"id":"https://openalex.org/keywords/fluorescence-lifetime-imaging-microscopy","display_name":"Fluorescence-lifetime imaging microscopy","score":0.5650899410247803},{"id":"https://openalex.org/keywords/near-infrared-spectroscopy","display_name":"Near-infrared spectroscopy","score":0.5320269465446472},{"id":"https://openalex.org/keywords/resolution","display_name":"Resolution (logic)","score":0.5067954659461975},{"id":"https://openalex.org/keywords/scattering","display_name":"Scattering","score":0.47046005725860596},{"id":"https://openalex.org/keywords/imaging-phantom","display_name":"Imaging phantom","score":0.45576274394989014},{"id":"https://openalex.org/keywords/light-scattering","display_name":"Light scattering","score":0.41534388065338135},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.23270326852798462},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.09110385179519653}],"concepts":[{"id":"https://openalex.org/C23690007","wikidata":"https://www.wikidata.org/wiki/Q1411145","display_name":"Radiance","level":2,"score":0.8956161737442017},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.7404955625534058},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.6611177921295166},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.6542245149612427},{"id":"https://openalex.org/C205372480","wikidata":"https://www.wikidata.org/wiki/Q210521","display_name":"Image resolution","level":2,"score":0.6098874807357788},{"id":"https://openalex.org/C179687394","wikidata":"https://www.wikidata.org/wiki/Q4826281","display_name":"Autofluorescence","level":3,"score":0.5878786444664001},{"id":"https://openalex.org/C6260449","wikidata":"https://www.wikidata.org/wiki/Q41364","display_name":"Wavelength","level":2,"score":0.5789703726768494},{"id":"https://openalex.org/C57477423","wikidata":"https://www.wikidata.org/wiki/Q1434196","display_name":"Fluorescence-lifetime imaging microscopy","level":3,"score":0.5650899410247803},{"id":"https://openalex.org/C43571822","wikidata":"https://www.wikidata.org/wiki/Q599037","display_name":"Near-infrared spectroscopy","level":2,"score":0.5320269465446472},{"id":"https://openalex.org/C138268822","wikidata":"https://www.wikidata.org/wiki/Q1051925","display_name":"Resolution (logic)","level":2,"score":0.5067954659461975},{"id":"https://openalex.org/C191486275","wikidata":"https://www.wikidata.org/wiki/Q210028","display_name":"Scattering","level":2,"score":0.47046005725860596},{"id":"https://openalex.org/C104293457","wikidata":"https://www.wikidata.org/wiki/Q28324852","display_name":"Imaging phantom","level":2,"score":0.45576274394989014},{"id":"https://openalex.org/C120456961","wikidata":"https://www.wikidata.org/wiki/Q210028","display_name":"Light scattering","level":3,"score":0.41534388065338135},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.23270326852798462},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.09110385179519653},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.3390/jimaging5110083","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5110083","pdf_url":"https://www.mdpi.com/2313-433X/5/11/83/pdf","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},{"id":"pmid:34460506","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34460506","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of imaging","raw_type":null},{"id":"pmh:oai:doaj.org/article:ca41f188cd56471f9e4fe61cde891cd0","is_oa":true,"landing_page_url":"https://doaj.org/article/ca41f188cd56471f9e4fe61cde891cd0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging, Vol 5, Iss 11, p 83 (2019)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2313-433X/5/11/83/","is_oa":true,"landing_page_url":"http://doi.org/10.3390/jimaging5110083","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging","raw_type":"Text"},{"id":"pmh:oai:nottingham-repository.worktribe.com:2965358","is_oa":true,"landing_page_url":"https://nottingham-repository.worktribe.com/output/2965358","pdf_url":null,"source":{"id":"https://openalex.org/S4306402483","display_name":"Repository@Nottingham (University of Nottingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I142263535","host_organization_name":"University of Nottingham","host_organization_lineage":["https://openalex.org/I142263535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:8321182","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8321182","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Imaging","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/jimaging5110083","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5110083","pdf_url":"https://www.mdpi.com/2313-433X/5/11/83/pdf","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2198755152","display_name":null,"funder_award_id":"NC/L001861/1","funder_id":"https://openalex.org/F4320320333","funder_display_name":"National Centre for the Replacement, Refinement and Reduction of Animals in Research"}],"funders":[{"id":"https://openalex.org/F4320320324","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58"},{"id":"https://openalex.org/F4320320333","display_name":"National Centre for the Replacement, Refinement and Reduction of Animals in Research","ror":"https://ror.org/02w0kg036"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2982279653.pdf","grobid_xml":"https://content.openalex.org/works/W2982279653.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W627376605","https://openalex.org/W1882549163","https://openalex.org/W1976730696","https://openalex.org/W1985928912","https://openalex.org/W1992600836","https://openalex.org/W1995187234","https://openalex.org/W2002234983","https://openalex.org/W2007492138","https://openalex.org/W2018553165","https://openalex.org/W2021689516","https://openalex.org/W2028113135","https://openalex.org/W2028421760","https://openalex.org/W2029606255","https://openalex.org/W2030051377","https://openalex.org/W2035074260","https://openalex.org/W2045936365","https://openalex.org/W2065020257","https://openalex.org/W2067203318","https://openalex.org/W2076414589","https://openalex.org/W2077770130","https://openalex.org/W2097683070","https://openalex.org/W2114825804","https://openalex.org/W2125956101","https://openalex.org/W2136708034","https://openalex.org/W2139747371","https://openalex.org/W2203565129","https://openalex.org/W2299343356","https://openalex.org/W2323643267","https://openalex.org/W2338312450","https://openalex.org/W2469674357","https://openalex.org/W2477662322","https://openalex.org/W2496171091","https://openalex.org/W2745348105","https://openalex.org/W3017156837","https://openalex.org/W3101981702","https://openalex.org/W6652256634","https://openalex.org/W6720303299","https://openalex.org/W7056991573"],"related_works":["https://openalex.org/W2078437878","https://openalex.org/W1966978880","https://openalex.org/W2037276225","https://openalex.org/W4407579053","https://openalex.org/W2009432835","https://openalex.org/W943367353","https://openalex.org/W1672167011","https://openalex.org/W3140843298","https://openalex.org/W2145569564","https://openalex.org/W4301600299"],"abstract_inverted_index":{"The":[0,58,87,133,166],"spatial":[1,91,109,127,185],"resolution":[2,92,110,128],"and":[3,18,28,43,49,73,90,101],"light":[4,15,41],"detected":[5],"in":[6,160],"fluorescence":[7,53],"imaging":[8,29,44,54,171],"for":[9,61,95,123],"small":[10],"animals":[11],"are":[12,55,78,93,158],"limited":[13],"by":[14,66,140,150],"scattering,":[16],"absorption":[17],"autofluorescence.":[19],"To":[20],"address":[21],"this,":[22],"novel":[23],"near-infrared":[24,173],"fluorescent":[25],"contrast":[26],"agents":[27],"configurations":[30,45],"have":[31],"been":[32],"investigated.":[33],"In":[34],"this":[35],"paper,":[36],"the":[37,40,68,108,112,118,126,141,151,156,161,164],"influence":[38],"of":[39,111,117,163],"wavelength":[42,174],"(full-field":[46],"illumination":[47,153],"system":[48,114,143,154],"scanning":[50,113,142],"system)":[51],"on":[52],"compared":[56],"quantitatively.":[57],"surface":[59,88,179],"radiance":[60,89],"both":[62],"systems":[63],"is":[64,115,144],"calculated":[65],"modifying":[67],"simulation":[69],"tool":[70],"Near-Infrared":[71],"Fluorescence":[72],"Spectral":[74],"Tomography.":[75],"Fluorescent":[76],"targets":[77,157],"embedded":[79],"within":[80],"a":[81,177],"scattering":[82],"medium":[83],"at":[84,130,136,172],"different":[85],"positions.":[86],"obtained":[94,139,149],"emission":[96],"wavelengths":[97],"between":[98],"620":[99],"nm":[100],"1000":[102],"nm.":[103],"It":[104],"was":[105],"found":[106],"that":[107,148,169],"independent":[116],"tissue":[119],"optical":[120],"properties,":[121],"whereas":[122],"full-field":[124,152],"illumination,":[125],"degrades":[129],"longer":[131],"wavelength.":[132],"full":[134],"width":[135],"half":[137],"maximum":[138],"25%":[145],"lower":[146],"than":[147],"when":[155],"located":[159],"middle":[162],"phantom.":[165],"results":[167],"indicate":[168],"although":[170],"can":[175],"achieve":[176],"higher":[178],"radiance,":[180],"it":[181],"may":[182],"produce":[183],"worse":[184],"resolution.":[186]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
