{"id":"https://openalex.org/W2921978807","doi":"https://doi.org/10.3390/jimaging5030035","title":"Analysis of Image Feature Characteristics for Automated Scoring of HER2 in Histology Slides","display_name":"Analysis of Image Feature Characteristics for Automated Scoring of HER2 in Histology Slides","publication_year":2019,"publication_date":"2019-03-10","ids":{"openalex":"https://openalex.org/W2921978807","doi":"https://doi.org/10.3390/jimaging5030035","mag":"2921978807","pmid":"https://pubmed.ncbi.nlm.nih.gov/34460463"},"language":"en","primary_location":{"id":"doi:10.3390/jimaging5030035","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5030035","pdf_url":"https://www.mdpi.com/2313-433X/5/3/35/pdf?version=1552210073","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2313-433X/5/3/35/pdf?version=1552210073","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010870517","display_name":"Ramakrishnan Mukundan","orcid":"https://orcid.org/0000-0003-4578-1931"},"institutions":[{"id":"https://openalex.org/I185492890","display_name":"University of Canterbury","ror":"https://ror.org/03y7q9t39","country_code":"NZ","type":"education","lineage":["https://openalex.org/I185492890"]}],"countries":["NZ"],"is_corresponding":true,"raw_author_name":"Ramakrishnan Mukundan","raw_affiliation_strings":["Department of Computer Science and Software Engineering, University of Canterbury, Christchurch 8140, New Zealand"],"raw_orcid":"https://orcid.org/0000-0003-4578-1931","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Software Engineering, University of Canterbury, Christchurch 8140, New Zealand","institution_ids":["https://openalex.org/I185492890"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5010870517"],"corresponding_institution_ids":["https://openalex.org/I185492890"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":1.4509,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.86440275,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"5","issue":"3","first_page":"35","last_page":"35"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9717000126838684,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9688000082969666,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7667443752288818},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6134582161903381},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5947777032852173},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5640192031860352},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.5469421148300171},{"id":"https://openalex.org/keywords/digital-pathology","display_name":"Digital pathology","score":0.5275837182998657},{"id":"https://openalex.org/keywords/local-binary-patterns","display_name":"Local binary patterns","score":0.5178066492080688},{"id":"https://openalex.org/keywords/feature-vector","display_name":"Feature vector","score":0.41691744327545166},{"id":"https://openalex.org/keywords/redundancy","display_name":"Redundancy (engineering)","score":0.4111633002758026},{"id":"https://openalex.org/keywords/histogram","display_name":"Histogram","score":0.40650230646133423},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.190296471118927}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7667443752288818},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6134582161903381},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5947777032852173},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5640192031860352},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.5469421148300171},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.5275837182998657},{"id":"https://openalex.org/C87335442","wikidata":"https://www.wikidata.org/wiki/Q2494345","display_name":"Local binary patterns","level":4,"score":0.5178066492080688},{"id":"https://openalex.org/C83665646","wikidata":"https://www.wikidata.org/wiki/Q42139305","display_name":"Feature vector","level":2,"score":0.41691744327545166},{"id":"https://openalex.org/C152124472","wikidata":"https://www.wikidata.org/wiki/Q1204361","display_name":"Redundancy (engineering)","level":2,"score":0.4111633002758026},{"id":"https://openalex.org/C53533937","wikidata":"https://www.wikidata.org/wiki/Q185020","display_name":"Histogram","level":3,"score":0.40650230646133423},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.190296471118927},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3390/jimaging5030035","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5030035","pdf_url":"https://www.mdpi.com/2313-433X/5/3/35/pdf?version=1552210073","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},{"id":"pmid:34460463","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34460463","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of imaging","raw_type":null},{"id":"pmh:oai:doaj.org/article:9dc5060a11534f92adfedc0d3395ca0d","is_oa":true,"landing_page_url":"https://doaj.org/article/9dc5060a11534f92adfedc0d3395ca0d","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging, Vol 5, Iss 3, p 35 (2019)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2313-433X/5/3/35/","is_oa":true,"landing_page_url":"http://doi.org/10.3390/jimaging5030035","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8320919","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8320919","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Imaging","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/jimaging5030035","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5030035","pdf_url":"https://www.mdpi.com/2313-433X/5/3/35/pdf?version=1552210073","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.7799999713897705,"display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320279","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2921978807.pdf","grobid_xml":"https://content.openalex.org/works/W2921978807.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W147804077","https://openalex.org/W1516748092","https://openalex.org/W1564686934","https://openalex.org/W1656766859","https://openalex.org/W2002882918","https://openalex.org/W2011169285","https://openalex.org/W2014644772","https://openalex.org/W2062169524","https://openalex.org/W2096526653","https://openalex.org/W2108950639","https://openalex.org/W2111574404","https://openalex.org/W2118016638","https://openalex.org/W2134262590","https://openalex.org/W2151608510","https://openalex.org/W2156677665","https://openalex.org/W2418166239","https://openalex.org/W2460896619","https://openalex.org/W2503442326","https://openalex.org/W2516604595","https://openalex.org/W2533907245","https://openalex.org/W2604318649","https://openalex.org/W2616930387","https://openalex.org/W2620578070","https://openalex.org/W2623064764","https://openalex.org/W2710049380","https://openalex.org/W2760354783","https://openalex.org/W2765623892","https://openalex.org/W2854650471","https://openalex.org/W2888550183","https://openalex.org/W4293768955","https://openalex.org/W7016150859"],"related_works":["https://openalex.org/W2581696209","https://openalex.org/W2020430625","https://openalex.org/W2044065526","https://openalex.org/W2955952267","https://openalex.org/W2058306460","https://openalex.org/W2076436625","https://openalex.org/W2083564146","https://openalex.org/W2542672976","https://openalex.org/W2049095871","https://openalex.org/W2148428954"],"abstract_inverted_index":{"The":[0],"evaluation":[1],"of":[2,15,21,33,63,81,91,115,125,131,141,181],"breast":[3],"cancer":[4],"grades":[5],"in":[6,42,77,99,112,159],"immunohistochemistry":[7],"(IHC)":[8],"slides":[9,35],"takes":[10],"into":[11],"account":[12],"various":[13,79],"types":[14,80],"visual":[16],"markers":[17],"and":[18,127,145,155],"morphological":[19,121],"features":[20,105,111,122,130,144,176],"stained":[22,183],"membrane":[23],"regions.":[24],"Digital":[25],"pathology":[26],"algorithms":[27],"using":[28,173],"whole":[29],"slide":[30],"images":[31],"(WSIs)":[32],"histology":[34,100],"have":[36],"recently":[37],"been":[38],"finding":[39],"several":[40],"applications":[41],"such":[43],"computer-assisted":[44],"evaluations.":[45],"Features":[46],"that":[47,84],"are":[48,56,85,103],"directly":[49],"related":[50],"to":[51],"biomarkers":[52],"used":[53],"by":[54],"pathologists":[55],"generally":[57],"preferred":[58],"over":[59],"the":[60,68,88,113,132,142,160,174],"pixel":[61],"values":[62],"entire":[64],"images,":[65],"even":[66],"though":[67],"latter":[69],"has":[70],"more":[71],"information":[72,150],"content.":[73],"This":[74,136,164],"paper":[75,137,165],"explores":[76],"detail":[78],"feature":[82,162],"measurements":[83],"suitable":[86],"for":[87,148],"automated":[89],"scoring":[90],"human":[92],"epidermal":[93],"growth":[94],"factor":[95],"receptor":[96],"2":[97],"(HER2)":[98],"slides.":[101,184],"These":[102],"intensity":[104,134],"known":[106],"as":[107],"characteristic":[108],"curves,":[109],"texture":[110],"form":[114],"uniform":[116],"local":[117],"binary":[118],"patterns":[119],"(ULBPs),":[120],"specifying":[123],"connectivity":[124],"regions,":[126],"first-order":[128],"statistical":[129],"overall":[133],"distribution.":[135],"considers":[138],"important":[139],"properties":[140],"above":[143],"outlines":[146],"methods":[147],"reducing":[149],"redundancy,":[151],"maximizing":[152],"inter-class":[153],"separability,":[154],"improving":[156],"classification":[157],"accuracy":[158],"combined":[161],"set.":[163],"also":[166],"presents":[167],"a":[168,178],"detailed":[169],"experimental":[170],"analysis":[171],"performed":[172],"aforementioned":[175],"on":[177],"WSI":[179],"dataset":[180],"IHC":[182]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
