{"id":"https://openalex.org/W2910317898","doi":"https://doi.org/10.3390/jimaging5010017","title":"Macrosight: A Novel Framework to Analyze the Shape and Movement of Interacting Macrophages Using Matlab\u00ae","display_name":"Macrosight: A Novel Framework to Analyze the Shape and Movement of Interacting Macrophages Using Matlab\u00ae","publication_year":2019,"publication_date":"2019-01-14","ids":{"openalex":"https://openalex.org/W2910317898","doi":"https://doi.org/10.3390/jimaging5010017","mag":"2910317898","pmid":"https://pubmed.ncbi.nlm.nih.gov/34465701"},"language":"en","primary_location":{"id":"doi:10.3390/jimaging5010017","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5010017","pdf_url":"https://www.mdpi.com/2313-433X/5/1/17/pdf?version=1547444807","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2313-433X/5/1/17/pdf?version=1547444807","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032466066","display_name":"Jos\u00e9 Alonso Sol\u00eds-Lemus","orcid":"https://orcid.org/0000-0002-2596-7811"},"institutions":[{"id":"https://openalex.org/I180825142","display_name":"City, University of London","ror":"https://ror.org/04489at23","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I180825142"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Jos\u00e9 Alonso Sol\u00eds-Lemus","raw_affiliation_strings":["School of Mathematics, Computer Science and Engineering, City, University of London, London EC1V 0HB, UK"],"raw_orcid":"https://orcid.org/0000-0002-2596-7811","affiliations":[{"raw_affiliation_string":"School of Mathematics, Computer Science and Engineering, City, University of London, London EC1V 0HB, UK","institution_ids":["https://openalex.org/I180825142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027559739","display_name":"Brian Stramer","orcid":"https://orcid.org/0000-0001-7034-3269"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Brian Stramer","raw_affiliation_strings":["Randall Division of Cell &amp; Molecular Biophysics, King\u2019s College London, London WC2R 2LS, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Randall Division of Cell &amp; Molecular Biophysics, King\u2019s College London, London WC2R 2LS, UK","institution_ids":["https://openalex.org/I183935753"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037886447","display_name":"Greg Slabaugh","orcid":"https://orcid.org/0000-0003-4060-5226"},"institutions":[{"id":"https://openalex.org/I180825142","display_name":"City, University of London","ror":"https://ror.org/04489at23","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I180825142"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Greg Slabaugh","raw_affiliation_strings":["School of Mathematics, Computer Science and Engineering, City, University of London, London EC1V 0HB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics, Computer Science and Engineering, City, University of London, London EC1V 0HB, UK","institution_ids":["https://openalex.org/I180825142"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083253222","display_name":"Constantino Carlos Reyes\u2010Aldasoro","orcid":"https://orcid.org/0000-0002-9466-2018"},"institutions":[{"id":"https://openalex.org/I180825142","display_name":"City, University of London","ror":"https://ror.org/04489at23","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I180825142"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Constantino Carlos Reyes-Aldasoro","raw_affiliation_strings":["School of Mathematics, Computer Science and Engineering, City, University of London, London EC1V 0HB, UK"],"raw_orcid":"https://orcid.org/0000-0002-9466-2018","affiliations":[{"raw_affiliation_string":"School of Mathematics, Computer Science and Engineering, City, University of London, London EC1V 0HB, UK","institution_ids":["https://openalex.org/I180825142"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032466066"],"corresponding_institution_ids":["https://openalex.org/I180825142"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":0.2624,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.54874666,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"5","issue":"1","first_page":"17","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10379","display_name":"Cellular Mechanics and Interactions","score":0.9760000109672546,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12061","display_name":"Axon Guidance and Neuronal Signaling","score":0.9659000039100647,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7376765012741089},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6670894026756287},{"id":"https://openalex.org/keywords/movement","display_name":"Movement (music)","score":0.5847014784812927},{"id":"https://openalex.org/keywords/matlab","display_name":"MATLAB","score":0.5639308094978333},{"id":"https://openalex.org/keywords/orientation","display_name":"Orientation (vector space)","score":0.5190568566322327},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48663362860679626},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4591815173625946},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4505114257335663},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3701026737689972},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.35637712478637695},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11006084084510803},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.10447719693183899},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10091876983642578},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.09724485874176025},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07899123430252075}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7376765012741089},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6670894026756287},{"id":"https://openalex.org/C2780226923","wikidata":"https://www.wikidata.org/wiki/Q929848","display_name":"Movement (music)","level":2,"score":0.5847014784812927},{"id":"https://openalex.org/C2780365114","wikidata":"https://www.wikidata.org/wiki/Q169478","display_name":"MATLAB","level":2,"score":0.5639308094978333},{"id":"https://openalex.org/C16345878","wikidata":"https://www.wikidata.org/wiki/Q107472979","display_name":"Orientation (vector space)","level":2,"score":0.5190568566322327},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48663362860679626},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4591815173625946},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4505114257335663},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3701026737689972},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.35637712478637695},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11006084084510803},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.10447719693183899},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10091876983642578},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.09724485874176025},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07899123430252075},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.3390/jimaging5010017","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5010017","pdf_url":"https://www.mdpi.com/2313-433X/5/1/17/pdf?version=1547444807","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},{"id":"pmid:34465701","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34465701","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of imaging","raw_type":null},{"id":"pmh:oai:kclpure.kcl.ac.uk:openaire/22cc0a99-508e-400f-a55d-98dbc31958a8","is_oa":true,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/22cc0a99-508e-400f-a55d-98dbc31958a8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sol\u00eds-Lemus, J A, Stramer, B, Slabaugh, G & Reyes-Aldasoro, C C 2019, 'MacroSight : A novel framework to analyze the shape and movement of interacting macrophages using MAtLABR \u2020', Journal of Imaging, vol. 5, no. 1, 17. https://doi.org/10.3390/jimaging5010017","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:openaccess.city.ac.uk:22139","is_oa":false,"landing_page_url":"https://openaccess.city.ac.uk/view/creators_id/constantino-carlos=2Ereyes-aldasoro.html>","pdf_url":null,"source":{"id":"https://openalex.org/S4306401940","display_name":"City Research Online (City University London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I180825142","host_organization_name":"City, University of London","host_organization_lineage":["https://openalex.org/I180825142"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"NonPeerReviewed"},{"id":"pmh:oai:doaj.org/article:e987ce127458445cae3d984a1000ed4e","is_oa":true,"landing_page_url":"https://doaj.org/article/e987ce127458445cae3d984a1000ed4e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging, Vol 5, Iss 1, p 17 (2019)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2313-433X/5/1/17/","is_oa":true,"landing_page_url":"http://doi.org/10.3390/jimaging5010017","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8320860","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8320860","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Imaging","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/jimaging5010017","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging5010017","pdf_url":"https://www.mdpi.com/2313-433X/5/1/17/pdf?version=1547444807","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.550000011920929}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332549","display_name":"City, University of London","ror":"https://ror.org/04489at23"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2910317898.pdf","grobid_xml":"https://content.openalex.org/works/W2910317898.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1219234173","https://openalex.org/W1547271135","https://openalex.org/W1640304961","https://openalex.org/W1828588838","https://openalex.org/W1988754065","https://openalex.org/W2004268022","https://openalex.org/W2015679500","https://openalex.org/W2020744745","https://openalex.org/W2044599041","https://openalex.org/W2055348159","https://openalex.org/W2097344968","https://openalex.org/W2097572235","https://openalex.org/W2141273399","https://openalex.org/W2141652419","https://openalex.org/W2144907975","https://openalex.org/W2161420227","https://openalex.org/W2499292135","https://openalex.org/W2586796445","https://openalex.org/W2758694956","https://openalex.org/W2778248072","https://openalex.org/W2806609927","https://openalex.org/W4302854363"],"related_works":["https://openalex.org/W4251298892","https://openalex.org/W2356013541","https://openalex.org/W2385444679","https://openalex.org/W3133868776","https://openalex.org/W2360644005","https://openalex.org/W2350667299","https://openalex.org/W2365027229","https://openalex.org/W4229851301","https://openalex.org/W2349721879","https://openalex.org/W2393374880"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"a":[3,89,129,138,142],"novel":[4],"software":[5],"framework,":[6],"called":[7],"macrosight,":[8],"which":[9],"incorporates":[10],"routines":[11],"to":[12,38,53,77],"detect,":[13],"track,":[14],"and":[15,19,102,118,137,153,164,168,178,193],"analyze":[16],"the":[17,40,60,70,81,95,115,145,148,162,165,170,189],"shape":[18],"movement":[20,190,200],"of":[21,35,42,62,73,97,99,121,133,147,150],"objects,":[22],"with":[23,108,182],"special":[24],"emphasis":[25],"on":[26],"macrophages.":[27],"The":[28,55,126,175],"key":[29],"feature":[30],"presented":[31],"in":[32,91,106,201],"macrosight":[33],"consists":[34],"an":[36,49,195],"algorithm":[37],"assess":[39],"changes":[41,191],"direction":[43,98],"derived":[44],"from":[45,199],"cell\u2013cell":[46],"contact,":[47],"where":[48],"interaction":[50,196],"is":[51,59,76],"assumed":[52],"occur.":[54],"main":[56,71],"biological":[57],"motivation":[58],"determination":[61],"certain":[63,187],"cell":[64,67,86],"interactions":[65,84],"influencing":[66],"migration.":[68],"Thus,":[69],"objective":[72],"this":[74],"work":[75],"provide":[78],"insights":[79],"into":[80,141,161],"notion":[82],"that":[83,185],"between":[85],"structures":[87],"cause":[88],"change":[90,96],"orientation.":[92],"Macrosight":[93],"analyzes":[94],"cells":[100,116,136,151],"before":[101,152,192],"after":[103,154,194],"they":[104,155],"come":[105],"contact":[107],"another":[109],"cell.":[110],"Interactions":[111],"are":[112,197],"determined":[113],"when":[114],"overlap":[117],"form":[119],"clumps":[120],"two":[122],"or":[123],"more":[124],"cells.":[125],"framework":[127,140],"integrates":[128],"segmentation":[130],"technique":[131],"capable":[132],"detecting":[134],"overlapping":[135],"tracking":[139],"tool":[143],"for":[144,172],"analysis":[146,163,180],"trajectories":[149],"overlap.":[156],"Preliminary":[157],"results":[158],"show":[159],"promise":[160],"hypothesis":[166],"proposed,":[167],"lays":[169],"groundwork":[171],"further":[173],"developments.":[174],"extensive":[176],"experimentation":[177],"data":[179],"show,":[181],"statistical":[183],"significance,":[184],"under":[186],"conditions,":[188],"different":[198],"controlled":[202],"cases.":[203]},"counts_by_year":[{"year":2020,"cited_by_count":3}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
