{"id":"https://openalex.org/W2999678175","doi":"https://doi.org/10.3390/informatics7010001","title":"Bayesian Integrative Modeling of Genome-Scale Metabolic and Regulatory Networks","display_name":"Bayesian Integrative Modeling of Genome-Scale Metabolic and Regulatory Networks","publication_year":2020,"publication_date":"2020-01-14","ids":{"openalex":"https://openalex.org/W2999678175","doi":"https://doi.org/10.3390/informatics7010001","mag":"2999678175"},"language":"en","primary_location":{"id":"doi:10.3390/informatics7010001","is_oa":true,"landing_page_url":"https://doi.org/10.3390/informatics7010001","pdf_url":"https://www.mdpi.com/2227-9709/7/1/1/pdf?version=1578974570","source":{"id":"https://openalex.org/S2738238905","display_name":"Informatics","issn_l":"2227-9709","issn":["2227-9709"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2227-9709/7/1/1/pdf?version=1578974570","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060871336","display_name":"Hanen Mhamdi","orcid":null},"institutions":[{"id":"https://openalex.org/I100445878","display_name":"\u00c9cole Centrale de Nantes","ror":"https://ror.org/03nh7d505","country_code":"FR","type":"education","lineage":["https://openalex.org/I100445878","https://openalex.org/I97188460"]},{"id":"https://openalex.org/I108714496","display_name":"Tunis University","ror":"https://ror.org/02q1spa57","country_code":"TN","type":"education","lineage":["https://openalex.org/I108714496"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210117005","display_name":"Laboratoire des Sciences du Num\u00e9rique de Nantes","ror":"https://ror.org/02snf8m58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100445878","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I4210117005","https://openalex.org/I4210124215","https://openalex.org/I4210127572","https://openalex.org/I4210139971","https://openalex.org/I97188460","https://openalex.org/I97188460"]},{"id":"https://openalex.org/I63596082","display_name":"Tunis El Manar University","ror":"https://ror.org/029cgt552","country_code":"TN","type":"education","lineage":["https://openalex.org/I63596082"]},{"id":"https://openalex.org/I97188460","display_name":"Nantes Universit\u00e9","ror":"https://ror.org/03gnr7b55","country_code":"FR","type":"education","lineage":["https://openalex.org/I97188460"]}],"countries":["FR","TN"],"is_corresponding":true,"raw_author_name":"Hanen Mhamdi","raw_affiliation_strings":["Facult\u00e9 des Sciences Math\u00e9matiques, Physiques et Naturelles de Tunis, Universit\u00e9 de Tunis El-Manar, 2092 Tunis, Tunisie","Laboratoire de Technologies de l\u2019Information et de la Communication et G\u00e9nie Electrique (LaTICE, ENSIT), Universit\u00e9 de Tunis, 1008 Tunis, Tunisie","Laboratory of Digital Sciences of Nantes-LS2N UMR 6004, Universit\u00e9 de Nantes, Centrale Nantes, CNRS, F-44000 Nantes, France"],"raw_orcid":"https://orcid.org/0000-0002-5432-9536","affiliations":[{"raw_affiliation_string":"Facult\u00e9 des Sciences Math\u00e9matiques, Physiques et Naturelles de Tunis, Universit\u00e9 de Tunis El-Manar, 2092 Tunis, Tunisie","institution_ids":["https://openalex.org/I108714496","https://openalex.org/I63596082"]},{"raw_affiliation_string":"Laboratoire de Technologies de l\u2019Information et de la Communication et G\u00e9nie Electrique (LaTICE, ENSIT), Universit\u00e9 de Tunis, 1008 Tunis, Tunisie","institution_ids":["https://openalex.org/I108714496"]},{"raw_affiliation_string":"Laboratory of Digital Sciences of Nantes-LS2N UMR 6004, Universit\u00e9 de Nantes, Centrale Nantes, CNRS, F-44000 Nantes, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I97188460","https://openalex.org/I4210117005","https://openalex.org/I100445878"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037413740","display_name":"J\u00e9r\u00e9mie Bourdon","orcid":"https://orcid.org/0000-0001-6674-8626"},"institutions":[{"id":"https://openalex.org/I100445878","display_name":"\u00c9cole Centrale de Nantes","ror":"https://ror.org/03nh7d505","country_code":"FR","type":"education","lineage":["https://openalex.org/I100445878","https://openalex.org/I97188460"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210117005","display_name":"Laboratoire des Sciences du Num\u00e9rique de Nantes","ror":"https://ror.org/02snf8m58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100445878","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I4210117005","https://openalex.org/I4210124215","https://openalex.org/I4210127572","https://openalex.org/I4210139971","https://openalex.org/I97188460","https://openalex.org/I97188460"]},{"id":"https://openalex.org/I97188460","display_name":"Nantes Universit\u00e9","ror":"https://ror.org/03gnr7b55","country_code":"FR","type":"education","lineage":["https://openalex.org/I97188460"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"J\u00e9r\u00e9mie Bourdon","raw_affiliation_strings":["Laboratory of Digital Sciences of Nantes-LS2N UMR 6004, Universit\u00e9 de Nantes, Centrale Nantes, CNRS, F-44000 Nantes, France"],"raw_orcid":"https://orcid.org/0000-0001-6674-8626","affiliations":[{"raw_affiliation_string":"Laboratory of Digital Sciences of Nantes-LS2N UMR 6004, Universit\u00e9 de Nantes, Centrale Nantes, CNRS, F-44000 Nantes, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I97188460","https://openalex.org/I4210117005","https://openalex.org/I100445878"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041552051","display_name":"Abdelhalim Larhlimi","orcid":"https://orcid.org/0000-0002-1709-2648"},"institutions":[{"id":"https://openalex.org/I100445878","display_name":"\u00c9cole Centrale de Nantes","ror":"https://ror.org/03nh7d505","country_code":"FR","type":"education","lineage":["https://openalex.org/I100445878","https://openalex.org/I97188460"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210117005","display_name":"Laboratoire des Sciences du Num\u00e9rique de Nantes","ror":"https://ror.org/02snf8m58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100445878","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I4210117005","https://openalex.org/I4210124215","https://openalex.org/I4210127572","https://openalex.org/I4210139971","https://openalex.org/I97188460","https://openalex.org/I97188460"]},{"id":"https://openalex.org/I97188460","display_name":"Nantes Universit\u00e9","ror":"https://ror.org/03gnr7b55","country_code":"FR","type":"education","lineage":["https://openalex.org/I97188460"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Abdelhalim Larhlimi","raw_affiliation_strings":["Laboratory of Digital Sciences of Nantes-LS2N UMR 6004, Universit\u00e9 de Nantes, Centrale Nantes, CNRS, F-44000 Nantes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Digital Sciences of Nantes-LS2N UMR 6004, Universit\u00e9 de Nantes, Centrale Nantes, CNRS, F-44000 Nantes, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I97188460","https://openalex.org/I4210117005","https://openalex.org/I100445878"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022306816","display_name":"Mourad Elloumi","orcid":"https://orcid.org/0000-0003-0570-4309"},"institutions":[{"id":"https://openalex.org/I108714496","display_name":"Tunis University","ror":"https://ror.org/02q1spa57","country_code":"TN","type":"education","lineage":["https://openalex.org/I108714496"]},{"id":"https://openalex.org/I63596082","display_name":"Tunis El Manar University","ror":"https://ror.org/029cgt552","country_code":"TN","type":"education","lineage":["https://openalex.org/I63596082"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Mourad Elloumi","raw_affiliation_strings":["Facult\u00e9 des Sciences Economiques et de Gestion de Tunis (FSEGT), Universit\u00e9 de Tunis El-Manar, 2092 Tunis, Tunisie","Laboratoire de Technologies de l\u2019Information et de la Communication et G\u00e9nie Electrique (LaTICE, ENSIT), Universit\u00e9 de Tunis, 1008 Tunis, Tunisie"],"raw_orcid":"https://orcid.org/0000-0003-0570-4309","affiliations":[{"raw_affiliation_string":"Facult\u00e9 des Sciences Economiques et de Gestion de Tunis (FSEGT), Universit\u00e9 de Tunis El-Manar, 2092 Tunis, Tunisie","institution_ids":["https://openalex.org/I108714496","https://openalex.org/I63596082"]},{"raw_affiliation_string":"Laboratoire de Technologies de l\u2019Information et de la Communication et G\u00e9nie Electrique (LaTICE, ENSIT), Universit\u00e9 de Tunis, 1008 Tunis, Tunisie","institution_ids":["https://openalex.org/I108714496"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060871336"],"corresponding_institution_ids":["https://openalex.org/I100445878","https://openalex.org/I108714496","https://openalex.org/I1294671590","https://openalex.org/I4210117005","https://openalex.org/I63596082","https://openalex.org/I97188460"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":921,"currency":"EUR","value_usd":993},"fwci":0.6688,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.66470403,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"7","issue":"1","first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.6505366563796997},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5751245617866516},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5668843984603882},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5594830513000488},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33128494024276733},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2960759401321411},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15309837460517883},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10433024168014526}],"concepts":[{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.6505366563796997},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5751245617866516},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5668843984603882},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5594830513000488},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33128494024276733},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2960759401321411},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15309837460517883},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10433024168014526}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/informatics7010001","is_oa":true,"landing_page_url":"https://doi.org/10.3390/informatics7010001","pdf_url":"https://www.mdpi.com/2227-9709/7/1/1/pdf?version=1578974570","source":{"id":"https://openalex.org/S2738238905","display_name":"Informatics","issn_l":"2227-9709","issn":["2227-9709"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Informatics","raw_type":"journal-article"},{"id":"pmh:oai:HAL:hal-02458270v1","is_oa":false,"landing_page_url":"https://hal.science/hal-02458270","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Informatics, 2020, 7 (1), pp.1. &#x27E8;10.3390/informatics7010001&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:e84a4ddb2c11415a85e16b0bce6ee14c","is_oa":true,"landing_page_url":"https://doaj.org/article/e84a4ddb2c11415a85e16b0bce6ee14c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Informatics, Vol 7, Iss 1, p 1 (2020)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2227-9709/7/1/1/","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3390/informatics7010001","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Informatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/informatics7010001","is_oa":true,"landing_page_url":"https://doi.org/10.3390/informatics7010001","pdf_url":"https://www.mdpi.com/2227-9709/7/1/1/pdf?version=1578974570","source":{"id":"https://openalex.org/S2738238905","display_name":"Informatics","issn_l":"2227-9709","issn":["2227-9709"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Informatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1283753021","display_name":null,"funder_award_id":"IDEALG ANR-10-BTBR","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G1376987792","display_name":null,"funder_award_id":"ANR-10-BTBR-02-04-11","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G175480296","display_name":null,"funder_award_id":"ANR-10-BTBR-02","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G752369905","display_name":null,"funder_award_id":"ANR-10-BTBR","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2999678175.pdf","grobid_xml":"https://content.openalex.org/works/W2999678175.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W642521510","https://openalex.org/W1530964327","https://openalex.org/W1982309495","https://openalex.org/W1998633945","https://openalex.org/W2001554877","https://openalex.org/W2006367501","https://openalex.org/W2022101765","https://openalex.org/W2028897202","https://openalex.org/W2036058623","https://openalex.org/W2044935306","https://openalex.org/W2045921664","https://openalex.org/W2062029454","https://openalex.org/W2065669781","https://openalex.org/W2078355959","https://openalex.org/W2084191969","https://openalex.org/W2085993965","https://openalex.org/W2086704851","https://openalex.org/W2098450614","https://openalex.org/W2099787654","https://openalex.org/W2107333582","https://openalex.org/W2112933558","https://openalex.org/W2123060905","https://openalex.org/W2124653577","https://openalex.org/W2126176298","https://openalex.org/W2133722387","https://openalex.org/W2141360045","https://openalex.org/W2144589197","https://openalex.org/W2152239989","https://openalex.org/W2153373497","https://openalex.org/W2157523980","https://openalex.org/W2161511352","https://openalex.org/W2162666840","https://openalex.org/W2164298117","https://openalex.org/W2166562911","https://openalex.org/W2167155713","https://openalex.org/W2179438025","https://openalex.org/W2216418212","https://openalex.org/W2232370058","https://openalex.org/W2275300015","https://openalex.org/W2275580678","https://openalex.org/W2295820626","https://openalex.org/W2403934794","https://openalex.org/W2524141079","https://openalex.org/W2621219284","https://openalex.org/W2767891136","https://openalex.org/W2782454362","https://openalex.org/W2789128799","https://openalex.org/W2799272866","https://openalex.org/W6631841644"],"related_works":["https://openalex.org/W2003194288","https://openalex.org/W2513589746","https://openalex.org/W2213189664","https://openalex.org/W2153919606","https://openalex.org/W2113024639","https://openalex.org/W2062254828","https://openalex.org/W4237480606","https://openalex.org/W2936968863","https://openalex.org/W4378672831","https://openalex.org/W1971792277"],"abstract_inverted_index":{"The":[0],"integration":[1,56],"of":[2,10,17,45,57,71,77,138,156],"high-throughput":[3],"data":[4],"to":[5,24,28,41,64,80,94,127,131],"build":[6],"predictive":[7,69,109],"computational":[8],"models":[9,21],"cellular":[11,26],"metabolism":[12,130],"is":[13,62,76],"a":[14,48],"major":[15],"challenge":[16],"systems":[18],"biology.":[19],"These":[20],"are":[22],"needed":[23],"predict":[25,132],"responses":[27],"genetic":[29,49],"and":[30,47,68,119],"environmental":[31],"perturbations.":[32,164],"Typically,":[33],"this":[34,103],"response":[35,137],"involves":[36],"both":[37],"metabolic":[38,72],"regulations":[39],"related":[40],"the":[42,55,58,66,82,135,153],"kinetic":[43],"properties":[44],"enzymes":[46],"regulation":[50],"affecting":[51],"their":[52],"concentrations.":[53],"Thus,":[54],"transcriptional":[59,163],"regulatory":[60],"information":[61],"required":[63],"improve":[65],"accuracy":[67],"ability":[70],"models.":[73],"Integrative":[74],"modeling":[75,121],"primary":[78],"importance":[79],"guide":[81],"search":[83],"for":[84,99],"various":[85,100],"applications":[86],"such":[87],"as":[88],"discovering":[89],"novel":[90],"potential":[91],"drug":[92,144],"targets":[93],"develop":[95],"efficient":[96],"therapeutic":[97],"strategies":[98],"diseases.":[101],"In":[102],"paper,":[104],"we":[105],"propose":[106],"an":[107],"integrative":[108],"model":[110],"based":[111],"on":[112],"techniques":[113],"combining":[114],"semantic":[115],"web,":[116],"probabilistic":[117],"modeling,":[118],"constraint-based":[120],"methods.":[122],"We":[123],"applied":[124],"our":[125],"approach":[126],"human":[128,157],"cancer":[129,140,159],"in":[133,151],"silico":[134],"growth":[136],"specific":[139],"cells":[141,160],"under":[142,161],"approved":[143],"effects.":[145],"Our":[146],"method":[147],"has":[148],"proven":[149],"successful":[150],"predicting":[152],"biomass":[154],"rates":[155],"liver":[158],"drug-induced":[162]},"counts_by_year":[{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
