{"id":"https://openalex.org/W2791650357","doi":"https://doi.org/10.3390/informatics5010013","title":"A Novel Three-Stage Filter-Wrapper Framework for miRNA Subset Selection in Cancer Classification","display_name":"A Novel Three-Stage Filter-Wrapper Framework for miRNA Subset Selection in Cancer Classification","publication_year":2018,"publication_date":"2018-03-01","ids":{"openalex":"https://openalex.org/W2791650357","doi":"https://doi.org/10.3390/informatics5010013","mag":"2791650357"},"language":"en","primary_location":{"id":"doi:10.3390/informatics5010013","is_oa":true,"landing_page_url":"https://doi.org/10.3390/informatics5010013","pdf_url":"https://www.mdpi.com/2227-9709/5/1/13/pdf?version=1544079518","source":{"id":"https://openalex.org/S2738238905","display_name":"Informatics","issn_l":"2227-9709","issn":["2227-9709"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2227-9709/5/1/13/pdf?version=1544079518","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006811562","display_name":"Mohammad Bagher Dowlatshahi","orcid":"https://orcid.org/0000-0002-4862-0626"},"institutions":[{"id":"https://openalex.org/I112536369","display_name":"Yazd University","ror":"https://ror.org/02x99ac45","country_code":"IR","type":"education","lineage":["https://openalex.org/I112536369"]},{"id":"https://openalex.org/I3123046734","display_name":"Lorestan University","ror":"https://ror.org/051bats05","country_code":"IR","type":"education","lineage":["https://openalex.org/I3123046734"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mohammad Bagher Dowlatshahi","raw_affiliation_strings":["Department of Computer Engineering, Faculty of Engineering, Lorestan University, Khoramabad 1489684511, Iran","Department of Computer Engineering, Faculty of Engineering, Yazd University, Yazd 891581-8411, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Faculty of Engineering, Lorestan University, Khoramabad 1489684511, Iran","institution_ids":["https://openalex.org/I3123046734"]},{"raw_affiliation_string":"Department of Computer Engineering, Faculty of Engineering, Yazd University, Yazd 891581-8411, Iran","institution_ids":["https://openalex.org/I112536369"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102814316","display_name":"Vali Derhami","orcid":"https://orcid.org/0000-0003-4691-0643"},"institutions":[{"id":"https://openalex.org/I112536369","display_name":"Yazd University","ror":"https://ror.org/02x99ac45","country_code":"IR","type":"education","lineage":["https://openalex.org/I112536369"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Vali Derhami","raw_affiliation_strings":["Department of Computer Engineering, Faculty of Engineering, Yazd University, Yazd 891581-8411, Iran"],"raw_orcid":"https://orcid.org/0000-0003-4691-0643","affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Faculty of Engineering, Yazd University, Yazd 891581-8411, Iran","institution_ids":["https://openalex.org/I112536369"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077535430","display_name":"Hossein Nezamabadi\u2013pour","orcid":"https://orcid.org/0000-0002-3350-7348"},"institutions":[{"id":"https://openalex.org/I115566878","display_name":"Shahid Bahonar University of Kerman","ror":"https://ror.org/04zn42r77","country_code":"IR","type":"education","lineage":["https://openalex.org/I115566878"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Hossein Nezamabadi-pour","raw_affiliation_strings":["Department of Electrical Engineering, Shahid Bahonar University of Kerman, Kerman 76169-14111, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, Shahid Bahonar University of Kerman, Kerman 76169-14111, Iran","institution_ids":["https://openalex.org/I115566878"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5102814316"],"corresponding_institution_ids":["https://openalex.org/I112536369"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":1.3521,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.77422086,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"5","issue":"1","first_page":"13","last_page":"13"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5785874724388123},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5350711345672607},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5083755850791931},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.4747850298881531},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.45719587802886963},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4429783821105957},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4318401515483856},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4046386480331421},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37495049834251404},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3151342272758484},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.30708178877830505},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2657429575920105},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12807106971740723},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09506389498710632}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5785874724388123},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5350711345672607},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5083755850791931},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.4747850298881531},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.45719587802886963},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4429783821105957},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4318401515483856},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4046386480331421},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37495049834251404},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3151342272758484},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.30708178877830505},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2657429575920105},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12807106971740723},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09506389498710632}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/informatics5010013","is_oa":true,"landing_page_url":"https://doi.org/10.3390/informatics5010013","pdf_url":"https://www.mdpi.com/2227-9709/5/1/13/pdf?version=1544079518","source":{"id":"https://openalex.org/S2738238905","display_name":"Informatics","issn_l":"2227-9709","issn":["2227-9709"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Informatics","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:403bc04872ab4926af2b544e7fab1002","is_oa":true,"landing_page_url":"https://doaj.org/article/403bc04872ab4926af2b544e7fab1002","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Informatics, Vol 5, Iss 1, p 13 (2018)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2227-9709/5/1/13/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/informatics5010013","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Informatics; Volume 5; Issue 1; Pages: 13","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/informatics5010013","is_oa":true,"landing_page_url":"https://doi.org/10.3390/informatics5010013","pdf_url":"https://www.mdpi.com/2227-9709/5/1/13/pdf?version=1544079518","source":{"id":"https://openalex.org/S2738238905","display_name":"Informatics","issn_l":"2227-9709","issn":["2227-9709"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Informatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2791650357.pdf","grobid_xml":"https://content.openalex.org/works/W2791650357.grobid-xml"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W63025775","https://openalex.org/W582829353","https://openalex.org/W1418108976","https://openalex.org/W1541317945","https://openalex.org/W1580817707","https://openalex.org/W1963626514","https://openalex.org/W1968075052","https://openalex.org/W1975586526","https://openalex.org/W1995972800","https://openalex.org/W2002979815","https://openalex.org/W2003723996","https://openalex.org/W2004338242","https://openalex.org/W2010828982","https://openalex.org/W2013885787","https://openalex.org/W2014915963","https://openalex.org/W2015395371","https://openalex.org/W2015954856","https://openalex.org/W2046357518","https://openalex.org/W2047099264","https://openalex.org/W2057176608","https://openalex.org/W2064610124","https://openalex.org/W2069928051","https://openalex.org/W2077215180","https://openalex.org/W2084851286","https://openalex.org/W2086208228","https://openalex.org/W2090727353","https://openalex.org/W2093799708","https://openalex.org/W2096166399","https://openalex.org/W2100253618","https://openalex.org/W2122274805","https://openalex.org/W2134691826","https://openalex.org/W2144420897","https://openalex.org/W2149772057","https://openalex.org/W2154053567","https://openalex.org/W2155344811","https://openalex.org/W2162833766","https://openalex.org/W2165489143","https://openalex.org/W2167101736","https://openalex.org/W2168825483","https://openalex.org/W2171296290","https://openalex.org/W2318088045","https://openalex.org/W2343420905","https://openalex.org/W2411885377","https://openalex.org/W2417084610","https://openalex.org/W2508483375","https://openalex.org/W2528103328","https://openalex.org/W2593421093","https://openalex.org/W2598941294","https://openalex.org/W2604772753","https://openalex.org/W2605902561","https://openalex.org/W2608514418","https://openalex.org/W2619644425","https://openalex.org/W2770461464","https://openalex.org/W2899093695","https://openalex.org/W4246565613","https://openalex.org/W4250375633","https://openalex.org/W6632333991","https://openalex.org/W6738234168"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W4392896533","https://openalex.org/W2062945643","https://openalex.org/W2050308539","https://openalex.org/W3151405604","https://openalex.org/W4241694095","https://openalex.org/W2330252996","https://openalex.org/W2793648706","https://openalex.org/W3043187607","https://openalex.org/W1494981348"],"abstract_inverted_index":{"Micro-Ribonucleic":[0],"Acids":[1],"(miRNAs)":[2],"are":[3,20,34,90],"small":[4],"non-coding":[5],"Ribonucleic":[6],"Acid":[7],"(RNA)":[8],"molecules":[9],"that":[10,187,214],"play":[11],"an":[12,162],"important":[13],"role":[14],"in":[15,25,194,223],"the":[16,26,46,79,84,94,101,113,121,127,130,145,152,166,170,176,180,188,195,215,227,232,237],"cancer":[17,37,63,80,181,211,233],"growth.":[18,38],"There":[19],"a":[21,42,70,107,201,220],"lot":[22],"of":[23,32,116,129,147,169,225,231,239],"miRNAs":[24,57,60,73,95,115,128,168],"human":[27],"body":[28],"and":[29,55,58,104,137,192,235],"not":[30],"all":[31],"them":[33],"responsible":[35,61],"for":[36,62,77,92],"Therefore,":[39],"there":[40],"is":[41,141,198],"need":[43],"to":[44,52,68,97,143,160],"propose":[45,69],"novel":[47,71],"miRNA":[48,108,131,171,210],"subset":[49,74,164],"selection":[50,75],"algorithms":[51,89,136],"remove":[53],"irrelevant":[54],"redundant":[56],"find":[59,161],"development.":[64],"This":[65],"paper":[66],"tries":[67,159],"three-stage":[72,217],"framework":[76,218],"increasing":[78],"classification":[81,234],"accuracy.":[82],"In":[83,120,151],"first":[85,125],"stage,":[86,123,154],"multiple":[87,134],"filter":[88,118,135],"used":[91,142],"ranking":[93,140],"according":[96],"their":[98],"relevance":[99],"with":[100],"class":[102],"label,":[103],"then":[105,138],"generating":[106],"pool":[109,132],"obtained":[110],"based":[111],"on":[112,208],"top-ranked":[114],"each":[117,149],"algorithm.":[119],"second":[122],"we":[124],"rank":[126],"by":[133,200],"this":[139],"weight":[144],"probability":[146],"selecting":[148],"miRNA.":[150],"third":[153],"Competitive":[155],"Swarm":[156],"Optimization":[157],"(CSO)":[158],"optimal":[163],"from":[165],"weighed":[167],"pool,":[172],"which":[173],"give":[174],"us":[175],"most":[177],"information":[178],"about":[179],"patients.":[182],"It":[183],"should":[184],"be":[185],"noted":[186],"balance":[189],"between":[190],"exploration":[191],"exploitation":[193],"proposed":[196,216],"algorithm":[197],"accomplished":[199],"zero-order":[202],"Fuzzy":[203],"Inference":[204],"System":[205],"(FIS).":[206],"Experiments":[207],"several":[209],"datasets":[212],"indicate":[213],"has":[219],"great":[221],"performance":[222],"terms":[224],"both":[226],"low":[228],"error":[229],"rate":[230],"minimizing":[236],"number":[238],"miRNAs.":[240]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2018-03-29T00:00:00"}
