{"id":"https://openalex.org/W1539894418","doi":"https://doi.org/10.3390/info8010012","title":"The Matrix Method of Representation, Analysis and Classification of Long Genetic Sequences","display_name":"The Matrix Method of Representation, Analysis and Classification of Long Genetic Sequences","publication_year":2017,"publication_date":"2017-01-17","ids":{"openalex":"https://openalex.org/W1539894418","doi":"https://doi.org/10.3390/info8010012","mag":"1539894418"},"language":"en","primary_location":{"id":"doi:10.3390/info8010012","is_oa":true,"landing_page_url":"https://doi.org/10.3390/info8010012","pdf_url":"https://www.mdpi.com/2078-2489/8/1/12/pdf?version=1484642939","source":{"id":"https://openalex.org/S4210219776","display_name":"Information","issn_l":"2078-2489","issn":["2078-2489"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2078-2489/8/1/12/pdf?version=1484642939","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066564703","display_name":"Ivan V. Stepanyan","orcid":"https://orcid.org/0000-0003-3176-5279"},"institutions":[{"id":"https://openalex.org/I1313323035","display_name":"Russian Academy of Sciences","ror":"https://ror.org/05qrfxd25","country_code":"RU","type":"government","lineage":["https://openalex.org/I1313323035"]},{"id":"https://openalex.org/I4210106329","display_name":"Russian Engineering Academy","ror":"https://ror.org/01fvvak72","country_code":"RU","type":"other","lineage":["https://openalex.org/I4210106329"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Ivan Stepanyan","raw_affiliation_strings":["Mechanical Engineering Research Institute of the Russian Academy of Sciences, Moscow 121248, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mechanical Engineering Research Institute of the Russian Academy of Sciences, Moscow 121248, Russia","institution_ids":["https://openalex.org/I4210106329","https://openalex.org/I1313323035"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023465449","display_name":"Sergey Petoukhov","orcid":"https://orcid.org/0000-0001-7355-1813"},"institutions":[{"id":"https://openalex.org/I1313323035","display_name":"Russian Academy of Sciences","ror":"https://ror.org/05qrfxd25","country_code":"RU","type":"government","lineage":["https://openalex.org/I1313323035"]},{"id":"https://openalex.org/I4210106329","display_name":"Russian Engineering Academy","ror":"https://ror.org/01fvvak72","country_code":"RU","type":"other","lineage":["https://openalex.org/I4210106329"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Sergey Petoukhov","raw_affiliation_strings":["Mechanical Engineering Research Institute of the Russian Academy of Sciences, Moscow 121248, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mechanical Engineering Research Institute of the Russian Academy of Sciences, Moscow 121248, Russia","institution_ids":["https://openalex.org/I4210106329","https://openalex.org/I1313323035"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5066564703"],"corresponding_institution_ids":["https://openalex.org/I1313323035","https://openalex.org/I4210106329"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.897,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.72566458,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"8","issue":"1","first_page":"12","last_page":"12"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.982200026512146,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9812999963760376,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6438306570053101},{"id":"https://openalex.org/keywords/nucleic-acid-sequence","display_name":"Nucleic acid sequence","score":0.5130389928817749},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.47089627385139465},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.4620245397090912},{"id":"https://openalex.org/keywords/kronecker-delta","display_name":"Kronecker delta","score":0.455005407333374},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.4495604336261749},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.43664079904556274},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4131471514701843},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3838966190814972},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.378574401140213},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36053013801574707},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3344266414642334},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08746382594108582},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.08504945039749146},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.06578925251960754}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6438306570053101},{"id":"https://openalex.org/C84148353","wikidata":"https://www.wikidata.org/wiki/Q863908","display_name":"Nucleic acid sequence","level":3,"score":0.5130389928817749},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.47089627385139465},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.4620245397090912},{"id":"https://openalex.org/C39482219","wikidata":"https://www.wikidata.org/wiki/Q192826","display_name":"Kronecker delta","level":2,"score":0.455005407333374},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.4495604336261749},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.43664079904556274},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4131471514701843},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3838966190814972},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.378574401140213},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36053013801574707},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3344266414642334},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08746382594108582},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.08504945039749146},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.06578925251960754},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/info8010012","is_oa":true,"landing_page_url":"https://doi.org/10.3390/info8010012","pdf_url":"https://www.mdpi.com/2078-2489/8/1/12/pdf?version=1484642939","source":{"id":"https://openalex.org/S4210219776","display_name":"Information","issn_l":"2078-2489","issn":["2078-2489"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:1dc86345924c45b698d7b6d0612cc9d3","is_oa":true,"landing_page_url":"https://doaj.org/article/1dc86345924c45b698d7b6d0612cc9d3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Information, Vol 8, Iss 1, p 12 (2017)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2078-2489/8/1/12/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/info8010012","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Information; Volume 8; Issue 1; Pages: 12","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/info8010012","is_oa":true,"landing_page_url":"https://doi.org/10.3390/info8010012","pdf_url":"https://www.mdpi.com/2078-2489/8/1/12/pdf?version=1484642939","source":{"id":"https://openalex.org/S4210219776","display_name":"Information","issn_l":"2078-2489","issn":["2078-2489"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334801","display_name":"Russian Academy of Sciences","ror":"https://ror.org/05qrfxd25"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1539894418.pdf","grobid_xml":"https://content.openalex.org/works/W1539894418.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W93801241","https://openalex.org/W1889303124","https://openalex.org/W1983142286","https://openalex.org/W2002487667","https://openalex.org/W2011407606","https://openalex.org/W2026166363","https://openalex.org/W2027769711","https://openalex.org/W2041048505","https://openalex.org/W2043675399","https://openalex.org/W2045454715","https://openalex.org/W2058271398","https://openalex.org/W2073403831","https://openalex.org/W2090545383","https://openalex.org/W2108000258","https://openalex.org/W2110887002","https://openalex.org/W2126019424","https://openalex.org/W2129103781","https://openalex.org/W2146173737","https://openalex.org/W2147270997","https://openalex.org/W2154408165","https://openalex.org/W2158642637","https://openalex.org/W2169178819","https://openalex.org/W2169224664","https://openalex.org/W2179285071","https://openalex.org/W2291768992","https://openalex.org/W2478892674","https://openalex.org/W2506358643","https://openalex.org/W2737040441","https://openalex.org/W4251740374","https://openalex.org/W6661421241","https://openalex.org/W6661746065","https://openalex.org/W6696874550","https://openalex.org/W6741175213"],"related_works":["https://openalex.org/W3153509215","https://openalex.org/W4301793409","https://openalex.org/W1986375199","https://openalex.org/W300594107","https://openalex.org/W1178061417","https://openalex.org/W2028667466","https://openalex.org/W2030956755","https://openalex.org/W2789582299","https://openalex.org/W3033877930","https://openalex.org/W1444116026"],"abstract_inverted_index":{"The":[0,118],"article":[1],"is":[2],"devoted":[3],"to":[4,91],"a":[5,32,60,69],"matrix":[6],"method":[7,30],"of":[8,11,17,24,34,36,39,46,48,52,56,59,63,86,102,105,113],"comparative":[9],"analysis":[10],"long":[12,70,106],"nucleotide":[13,71,93,107],"sequences":[14,97,108],"by":[15],"means":[16],"presenting":[18],"each":[19],"sequence":[20,72],"in":[21],"the":[22,44,57],"form":[23],"three":[25],"digital":[26],"binary":[27,87,103],"sequences.":[28],"This":[29],"uses":[31,43],"set":[33,51],"symmetries":[35],"biochemical":[37],"attributes":[38],"nucleotides.":[40],"It":[41],"also":[42],"possibility":[45],"presentation":[47],"every":[49],"whole":[50],"N-mers":[53],"as":[54,77],"one":[55],"members":[58],"Kronecker":[61],"family":[62],"genetic":[64],"matrices.":[65],"With":[66],"this":[67],"method,":[68],"can":[73],"be":[74],"visually":[75],"represented":[76],"an":[78],"individual":[79],"fractal-like":[80],"mosaic":[81,85],"or":[82],"another":[83],"regular":[84],"type.":[88],"In":[89],"contrast":[90],"natural":[92],"sequences,":[94],"artificial":[95],"random":[96],"give":[98],"non-regular":[99],"patterns.":[100],"Examples":[101],"mosaics":[104],"are":[109,121],"shown,":[110],"including":[111],"cases":[112],"human":[114],"chromosomes":[115],"and":[116],"penicillins.":[117],"obtained":[119],"results":[120],"then":[122],"discussed.":[123]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
