{"id":"https://openalex.org/W4214739519","doi":"https://doi.org/10.3390/info13030108","title":"A miRNA-Disease Association Identification Method Based on Reliable Negative Sample Selection and Improved Single-Hidden Layer Feedforward Neural Network","display_name":"A miRNA-Disease Association Identification Method Based on Reliable Negative Sample Selection and Improved Single-Hidden Layer Feedforward Neural Network","publication_year":2022,"publication_date":"2022-02-24","ids":{"openalex":"https://openalex.org/W4214739519","doi":"https://doi.org/10.3390/info13030108"},"language":"en","primary_location":{"id":"doi:10.3390/info13030108","is_oa":true,"landing_page_url":"https://doi.org/10.3390/info13030108","pdf_url":"https://www.mdpi.com/2078-2489/13/3/108/pdf?version=1645783317","source":{"id":"https://openalex.org/S4210219776","display_name":"Information","issn_l":"2078-2489","issn":["2078-2489"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2078-2489/13/3/108/pdf?version=1645783317","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041339158","display_name":"Qinglong Tian","orcid":null},"institutions":[{"id":"https://openalex.org/I198357462","display_name":"Changsha University","ror":"https://ror.org/011d8sm39","country_code":"CN","type":"education","lineage":["https://openalex.org/I198357462"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qinglong Tian","raw_affiliation_strings":["School of Computer Engineering and Applied Mathematics, Changsha University, Changsha 410022, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering and Applied Mathematics, Changsha University, Changsha 410022, China","institution_ids":["https://openalex.org/I198357462"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060861535","display_name":"S. Zhou","orcid":"https://orcid.org/0000-0002-7517-9653"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Su Zhou","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha 410082, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha 410082, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101718225","display_name":"Qi Wu","orcid":"https://orcid.org/0009-0007-2502-4446"},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Wu","raw_affiliation_strings":["College of Life Science, Anhui Agriculture University, Hefei 230036, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science, Anhui Agriculture University, Hefei 230036, China","institution_ids":["https://openalex.org/I140221134"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5060861535"],"corresponding_institution_ids":["https://openalex.org/I16609230"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.0963,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.37567124,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"13","issue":"3","first_page":"108","last_page":"108"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.540291965007782},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5395433902740479},{"id":"https://openalex.org/keywords/feed-forward","display_name":"Feed forward","score":0.5365979671478271},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5049136281013489},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.49489086866378784},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4941463768482208},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.49169760942459106},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4314456880092621},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40266963839530945},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38749611377716064},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36807623505592346},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2936244010925293},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28437721729278564},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11090531945228577}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.540291965007782},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5395433902740479},{"id":"https://openalex.org/C38858127","wikidata":"https://www.wikidata.org/wiki/Q5441228","display_name":"Feed forward","level":2,"score":0.5365979671478271},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5049136281013489},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.49489086866378784},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4941463768482208},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.49169760942459106},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4314456880092621},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40266963839530945},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38749611377716064},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36807623505592346},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2936244010925293},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28437721729278564},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11090531945228577},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C133731056","wikidata":"https://www.wikidata.org/wiki/Q4917288","display_name":"Control engineering","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/info13030108","is_oa":true,"landing_page_url":"https://doi.org/10.3390/info13030108","pdf_url":"https://www.mdpi.com/2078-2489/13/3/108/pdf?version=1645783317","source":{"id":"https://openalex.org/S4210219776","display_name":"Information","issn_l":"2078-2489","issn":["2078-2489"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:20991851e75c4dda961ef123c5610ae2","is_oa":false,"landing_page_url":"https://doaj.org/article/20991851e75c4dda961ef123c5610ae2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Information, Vol 13, Iss 3, p 108 (2022)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2078-2489/13/3/108/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/info13030108","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Information; Volume 13; Issue 3; Pages: 108","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/info13030108","is_oa":true,"landing_page_url":"https://doi.org/10.3390/info13030108","pdf_url":"https://www.mdpi.com/2078-2489/13/3/108/pdf?version=1645783317","source":{"id":"https://openalex.org/S4210219776","display_name":"Information","issn_l":"2078-2489","issn":["2078-2489"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4214739519.pdf","grobid_xml":"https://content.openalex.org/works/W4214739519.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1521652389","https://openalex.org/W1595948114","https://openalex.org/W1975167804","https://openalex.org/W2022732522","https://openalex.org/W2026531690","https://openalex.org/W2047967134","https://openalex.org/W2049907435","https://openalex.org/W2103151642","https://openalex.org/W2106029302","https://openalex.org/W2128768066","https://openalex.org/W2132694427","https://openalex.org/W2138664009","https://openalex.org/W2141222510","https://openalex.org/W2156133650","https://openalex.org/W2158135353","https://openalex.org/W2162674813","https://openalex.org/W2163106706","https://openalex.org/W2171260596","https://openalex.org/W2557304967","https://openalex.org/W2584926544","https://openalex.org/W2592189645","https://openalex.org/W2607159126","https://openalex.org/W2766227800","https://openalex.org/W2790363766","https://openalex.org/W2799307902","https://openalex.org/W2802188318","https://openalex.org/W2888358121","https://openalex.org/W2901312953","https://openalex.org/W2913427136","https://openalex.org/W2942820662","https://openalex.org/W2944230847","https://openalex.org/W2971711749","https://openalex.org/W2994851090","https://openalex.org/W2996338703","https://openalex.org/W3001440478","https://openalex.org/W3010217868","https://openalex.org/W3010521003","https://openalex.org/W3014506286","https://openalex.org/W3017317719","https://openalex.org/W3021586058","https://openalex.org/W3038720525","https://openalex.org/W3045644454","https://openalex.org/W3084174824","https://openalex.org/W3088932244","https://openalex.org/W3093763138","https://openalex.org/W3109724004","https://openalex.org/W3146565636","https://openalex.org/W3171375650","https://openalex.org/W3197552172","https://openalex.org/W4246271082"],"related_works":["https://openalex.org/W2286391053","https://openalex.org/W2982600058","https://openalex.org/W1963486701","https://openalex.org/W2312483540","https://openalex.org/W4249477090","https://openalex.org/W191745111","https://openalex.org/W1522083559","https://openalex.org/W2007570603","https://openalex.org/W2808224918","https://openalex.org/W2773679836"],"abstract_inverted_index":{"miRNAs":[0,92],"are":[1,11,16,153,181],"a":[2,29,54,60],"category":[3],"of":[4,23,35,133,144,166,173,193],"important":[5],"endogenous":[6],"non-coding":[7],"small":[8],"RNAs":[9],"and":[10,27,76,93,130,142,148,191,206],"ubiquitous":[12],"in":[13,19,32,42,162,183,199],"eukaryotes.":[14],"They":[15],"widely":[17],"involved":[18],"the":[20,33,68,117,124,131,139,156,163,174,184,189,194],"regulatory":[21],"process":[22],"post-transcriptional":[24],"gene":[25],"expression":[26],"play":[28],"critical":[30],"part":[31],"development":[34],"human":[36],"diseases.":[37],"By":[38],"utilizing":[39],"recent":[40],"advancements":[41],"big":[43],"data":[44,126],"technology,":[45],"using":[46],"bioinformatics":[47],"methods":[48],"to":[49,66,115,155],"identify":[50,67],"causative":[51],"miRNA":[52],"becomes":[53],"hot":[55],"spot.":[56],"In":[57],"this":[58],"paper,":[59],"method":[61],"called":[62],"RNSSLFN":[63,145,195,198],"is":[64],"proposed":[65],"miRNA-disease":[69,102,178,201],"associations":[70,103,202],"by":[71],"reliable":[72,97],"negative":[73,98],"sample":[74],"selection":[75],"an":[77,112],"improved":[78,113],"single-hidden":[79],"layer":[80],"feedforward":[81],"neural":[82],"network":[83],"(SLFN).":[84],"It":[85],"involves,":[86],"firstly,":[87],"obtaining":[88],"integrated":[89],"similarity":[90],"for":[91],"diseases;":[94],"next,":[95],"selecting":[96],"samples":[99],"from":[100],"unknown":[101],"via":[104],"distinguishing":[105],"up-regulated":[106],"or":[107],"down-regulated":[108],"miRNAs;":[109],"then,":[110],"introducing":[111],"SLFN":[114],"solve":[116],"prediction":[118],"task.":[119],"The":[120],"experimental":[121],"results":[122],"on":[123],"latest":[125],"sets":[127],"HMDD":[128],"v3.2":[129],"framework":[132],"5-fold":[134],"cross-validation":[135],"(CV)":[136],"show":[137],"that":[138],"average":[140],"AUC":[141],"AUPR":[143],"achieve":[146],"0.9316":[147],"0.9065":[149],"m,":[150],"respectively,":[151],"which":[152,186],"superior":[154],"other":[157],"three":[158],"state-of-the-art":[159],"methods.":[160],"Furthermore,":[161],"case":[164],"studies":[165],"10":[167],"common":[168],"cancers,":[169],"more":[170],"than":[171],"70%":[172],"top":[175],"30":[176],"predicted":[177],"association":[179],"pairs":[180],"verified":[182],"databases,":[185],"further":[187],"confirms":[188],"reliability":[190],"effectiveness":[192],"model.":[196],"Generally,":[197],"predicting":[200],"has":[203],"prodigious":[204],"potential":[205],"extensive":[207],"foreground.":[208]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
