{"id":"https://openalex.org/W3139474373","doi":"https://doi.org/10.3390/e23050498","title":"Information-Efficient, Off-Center Sampling Results in Improved Precision in 3D Single-Particle Tracking Microscopy","display_name":"Information-Efficient, Off-Center Sampling Results in Improved Precision in 3D Single-Particle Tracking Microscopy","publication_year":2021,"publication_date":"2021-04-22","ids":{"openalex":"https://openalex.org/W3139474373","doi":"https://doi.org/10.3390/e23050498","mag":"3139474373","pmid":"https://pubmed.ncbi.nlm.nih.gov/33921987"},"language":"en","primary_location":{"id":"doi:10.3390/e23050498","is_oa":true,"landing_page_url":"https://doi.org/10.3390/e23050498","pdf_url":"https://www.mdpi.com/1099-4300/23/5/498/pdf?version=1619074683","source":{"id":"https://openalex.org/S195231649","display_name":"Entropy","issn_l":"1099-4300","issn":["1099-4300"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1099-4300/23/5/498/pdf?version=1619074683","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078933748","display_name":"Chen Zhang","orcid":"https://orcid.org/0000-0003-0193-3948"},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chen Zhang","raw_affiliation_strings":["Department of Chemistry, Duke University, Durham, NC 27708, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Duke University, Durham, NC 27708, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031984745","display_name":"Kevin Welsher","orcid":"https://orcid.org/0000-0002-3180-279X"},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kevin Welsher","raw_affiliation_strings":["Department of Chemistry, Duke University, Durham, NC 27708, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Duke University, Durham, NC 27708, USA","institution_ids":["https://openalex.org/I170897317"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5031984745"],"corresponding_institution_ids":["https://openalex.org/I170897317"],"apc_list":{"value":2000,"currency":"CHF","value_usd":2165},"apc_paid":{"value":2000,"currency":"CHF","value_usd":2165},"fwci":3.253,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.91792034,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"23","issue":"5","first_page":"498","last_page":"498"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12466","display_name":"Near-Field Optical Microscopy","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11897","display_name":"Digital Holography and Microscopy","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sampling","display_name":"Sampling (signal processing)","score":0.7827328443527222},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.7239766120910645},{"id":"https://openalex.org/keywords/photon","display_name":"Photon","score":0.7046829462051392},{"id":"https://openalex.org/keywords/particle","display_name":"Particle (ecology)","score":0.5365514755249023},{"id":"https://openalex.org/keywords/dimension","display_name":"Dimension (graph theory)","score":0.48879167437553406},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4458063840866089},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.3679371476173401},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3394317030906677},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.33768031001091003},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3148058354854584},{"id":"https://openalex.org/keywords/detector","display_name":"Detector","score":0.18145662546157837},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10913422703742981}],"concepts":[{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.7827328443527222},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.7239766120910645},{"id":"https://openalex.org/C159317903","wikidata":"https://www.wikidata.org/wiki/Q3198","display_name":"Photon","level":2,"score":0.7046829462051392},{"id":"https://openalex.org/C2778517922","wikidata":"https://www.wikidata.org/wiki/Q7140482","display_name":"Particle (ecology)","level":2,"score":0.5365514755249023},{"id":"https://openalex.org/C33676613","wikidata":"https://www.wikidata.org/wiki/Q13415176","display_name":"Dimension (graph theory)","level":2,"score":0.48879167437553406},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4458063840866089},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.3679371476173401},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3394317030906677},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.33768031001091003},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3148058354854584},{"id":"https://openalex.org/C94915269","wikidata":"https://www.wikidata.org/wiki/Q1834857","display_name":"Detector","level":2,"score":0.18145662546157837},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10913422703742981},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3390/e23050498","is_oa":true,"landing_page_url":"https://doi.org/10.3390/e23050498","pdf_url":"https://www.mdpi.com/1099-4300/23/5/498/pdf?version=1619074683","source":{"id":"https://openalex.org/S195231649","display_name":"Entropy","issn_l":"1099-4300","issn":["1099-4300"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy","raw_type":"journal-article"},{"id":"pmid:33921987","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33921987","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy (Basel, Switzerland)","raw_type":null},{"id":"pmh:oai:doaj.org/article:335da72d2ff54703bf7e8fe12d975f1c","is_oa":true,"landing_page_url":"https://doaj.org/article/335da72d2ff54703bf7e8fe12d975f1c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Entropy, Vol 23, Iss 5, p 498 (2021)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1099-4300/23/5/498/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/e23050498","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Entropy; Volume 23; Issue 5; Pages: 498","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8143542","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8143542","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Entropy (Basel)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/e23050498","is_oa":true,"landing_page_url":"https://doi.org/10.3390/e23050498","pdf_url":"https://www.mdpi.com/1099-4300/23/5/498/pdf?version=1619074683","source":{"id":"https://openalex.org/S195231649","display_name":"Entropy","issn_l":"1099-4300","issn":["1099-4300"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3374755068","display_name":null,"funder_award_id":"1847899","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5921281487","display_name":null,"funder_award_id":"number","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G80269827","display_name":null,"funder_award_id":"R35GM124868","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3139474373.pdf","grobid_xml":"https://content.openalex.org/works/W3139474373.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W967487999","https://openalex.org/W1966816594","https://openalex.org/W1968048731","https://openalex.org/W1994674823","https://openalex.org/W2022179322","https://openalex.org/W2034538112","https://openalex.org/W2035368727","https://openalex.org/W2041160105","https://openalex.org/W2052669149","https://openalex.org/W2082801721","https://openalex.org/W2090575891","https://openalex.org/W2098428695","https://openalex.org/W2128323873","https://openalex.org/W2133297096","https://openalex.org/W2142597289","https://openalex.org/W2146404768","https://openalex.org/W2165994754","https://openalex.org/W2171820152","https://openalex.org/W2278683171","https://openalex.org/W2394821414","https://openalex.org/W2554260837","https://openalex.org/W2607361701","https://openalex.org/W2612310777","https://openalex.org/W2624810535","https://openalex.org/W2898224116","https://openalex.org/W2900062142","https://openalex.org/W2950836492","https://openalex.org/W2952583365","https://openalex.org/W2965630240","https://openalex.org/W2973878648","https://openalex.org/W3036489110","https://openalex.org/W3042279203","https://openalex.org/W3117453716"],"related_works":["https://openalex.org/W2084086966","https://openalex.org/W2023861399","https://openalex.org/W2730915376","https://openalex.org/W1987895267","https://openalex.org/W2626306547","https://openalex.org/W2350519135","https://openalex.org/W2535308487","https://openalex.org/W2028694594","https://openalex.org/W2983564135","https://openalex.org/W2042756854"],"abstract_inverted_index":{"In":[0],"this":[1],"work,":[2],"we":[3,84],"present":[4],"a":[5,47,74,95],"3D":[6,81],"single-particle":[7],"tracking":[8,122],"system":[9,97],"that":[10,20,30],"can":[11,70],"apply":[12],"tailored":[13],"sampling":[14,32,52,69],"patterns":[15,53,93],"to":[16,58,67,107],"selectively":[17],"extract":[18],"photons":[19,40,115,128],"yield":[21],"the":[22,87,111],"most":[23,41],"information":[24,38,109],"for":[25,120],"particle":[26,121],"localization.":[27,82],"We":[28],"demonstrate":[29],"off-center":[31,51,76],"at":[33],"locations":[34],"predicted":[35],"by":[36],"Fisher":[37],"utilizes":[39],"efficiently.":[42],"When":[43],"performing":[44],"localization":[45],"in":[46,64,80,94,124],"single":[48],"dimension,":[49],"optimized":[50],"gave":[54],"doubled":[55],"precision":[56,65,101],"compared":[57,66],"uniform":[59,68,103],"sampling.":[60,104],"A":[61],"~20%":[62],"increase":[63],"be":[71,130],"achieved":[72,99],"when":[73],"similar":[75],"pattern":[77],"is":[78,118],"used":[79],"Here,":[83],"systematically":[85],"investigated":[86],"photon":[88],"efficiency":[89],"of":[90,114],"different":[91],"emission":[92],"diffraction-limited":[96],"and":[98],"higher":[100],"than":[102],"The":[105],"ability":[106],"maximize":[108],"from":[110],"limited":[112],"number":[113],"demonstrated":[116],"here":[117],"critical":[119],"applications":[123],"biological":[125],"samples,":[126],"where":[127],"may":[129],"limited.":[131]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
