{"id":"https://openalex.org/W3112932631","doi":"https://doi.org/10.3390/e23010002","title":"Application of Biological Domain Knowledge Based Feature Selection on Gene Expression Data","display_name":"Application of Biological Domain Knowledge Based Feature Selection on Gene Expression Data","publication_year":2020,"publication_date":"2020-12-22","ids":{"openalex":"https://openalex.org/W3112932631","doi":"https://doi.org/10.3390/e23010002","mag":"3112932631","pmid":"https://pubmed.ncbi.nlm.nih.gov/33374969"},"language":"en","primary_location":{"id":"doi:10.3390/e23010002","is_oa":true,"landing_page_url":"https://doi.org/10.3390/e23010002","pdf_url":"https://www.mdpi.com/1099-4300/23/1/2/pdf?version=1609426316","source":{"id":"https://openalex.org/S195231649","display_name":"Entropy","issn_l":"1099-4300","issn":["1099-4300"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1099-4300/23/1/2/pdf?version=1609426316","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091900270","display_name":"Malik Yousef","orcid":"https://orcid.org/0000-0001-8780-6303"},"institutions":[{"id":"https://openalex.org/I4210138950","display_name":"Zefat Academic College","ror":"https://ror.org/03syp5w68","country_code":"IL","type":"education","lineage":["https://openalex.org/I4210138950"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Malik Yousef","raw_affiliation_strings":["Department of Information Systems, Zefat Academic College, Zefat 13206, Israel","Galilee Digital Health Research Center (GDH), Zefat Academic College, Zefat 13206, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Information Systems, Zefat Academic College, Zefat 13206, Israel","institution_ids":["https://openalex.org/I4210138950"]},{"raw_affiliation_string":"Galilee Digital Health Research Center (GDH), Zefat Academic College, Zefat 13206, Israel","institution_ids":["https://openalex.org/I4210138950"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100403748","display_name":"Abhishek Kumar","orcid":"https://orcid.org/0000-0003-4172-4059"},"institutions":[{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]},{"id":"https://openalex.org/I164861460","display_name":"Manipal Academy of Higher Education","ror":"https://ror.org/02xzytt36","country_code":"IN","type":"education","lineage":["https://openalex.org/I164861460"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Abhishek Kumar","raw_affiliation_strings":["Institute of Bioinformatics, International Technology Park, Bangalore 560066, India","Manipal Academy of Higher Education (MAHE), Manipal 576104, India"],"affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, International Technology Park, Bangalore 560066, India","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Manipal Academy of Higher Education (MAHE), Manipal 576104, India","institution_ids":["https://openalex.org/I164861460"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046915342","display_name":"Burcu Bak\u0131r-G\u00fcng\u00f6r","orcid":"https://orcid.org/0000-0002-2272-6270"},"institutions":[{"id":"https://openalex.org/I95293974","display_name":"Abdullah G\u00fcl University","ror":"https://ror.org/00zdyy359","country_code":"TR","type":"education","lineage":["https://openalex.org/I95293974"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Burcu Bakir-Gungor","raw_affiliation_strings":["Department of Computer Engineering, Faculty of Engineering, Abdullah Gul University, Kayseri 38080, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Faculty of Engineering, Abdullah Gul University, Kayseri 38080, Turkey","institution_ids":["https://openalex.org/I95293974"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5091900270"],"corresponding_institution_ids":["https://openalex.org/I4210138950"],"apc_list":{"value":2000,"currency":"CHF","value_usd":2165},"apc_paid":{"value":2000,"currency":"CHF","value_usd":2165},"fwci":4.2564,"has_fulltext":true,"cited_by_count":76,"citation_normalized_percentile":{"value":0.95481149,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"23","issue":"1","first_page":"2","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.7016332149505615},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6168797016143799},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.6162174940109253},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5468300580978394},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5412504076957703},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5003139972686768},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4796736240386963},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.4626999497413635},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.46239906549453735},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4563896656036377},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4325099587440491},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.39614278078079224},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34119588136672974},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2902286648750305},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1841418743133545}],"concepts":[{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.7016332149505615},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6168797016143799},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.6162174940109253},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5468300580978394},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5412504076957703},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5003139972686768},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4796736240386963},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.4626999497413635},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.46239906549453735},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4563896656036377},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4325099587440491},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39614278078079224},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34119588136672974},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2902286648750305},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1841418743133545},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3390/e23010002","is_oa":true,"landing_page_url":"https://doi.org/10.3390/e23010002","pdf_url":"https://www.mdpi.com/1099-4300/23/1/2/pdf?version=1609426316","source":{"id":"https://openalex.org/S195231649","display_name":"Entropy","issn_l":"1099-4300","issn":["1099-4300"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy","raw_type":"journal-article"},{"id":"pmid:33374969","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33374969","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy (Basel, Switzerland)","raw_type":null},{"id":"pmh:oai:doaj.org/article:812bfadd6b0e4a6fa2e54b0713b252c5","is_oa":true,"landing_page_url":"https://doaj.org/article/812bfadd6b0e4a6fa2e54b0713b252c5","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Entropy, Vol 23, Iss 1, p 2 (2020)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1099-4300/23/1/2/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/e23010002","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Entropy; Volume 23; Issue 1; Pages: 2","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:7821996","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7821996","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Entropy (Basel)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/e23010002","is_oa":true,"landing_page_url":"https://doi.org/10.3390/e23010002","pdf_url":"https://www.mdpi.com/1099-4300/23/1/2/pdf?version=1609426316","source":{"id":"https://openalex.org/S195231649","display_name":"Entropy","issn_l":"1099-4300","issn":["1099-4300"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Entropy","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.4099999964237213}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3112932631.pdf","grobid_xml":"https://content.openalex.org/works/W3112932631.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W1652728956","https://openalex.org/W1835740130","https://openalex.org/W1964042173","https://openalex.org/W1971917261","https://openalex.org/W1976734130","https://openalex.org/W1979900513","https://openalex.org/W1981509058","https://openalex.org/W2019303707","https://openalex.org/W2028204570","https://openalex.org/W2045741102","https://openalex.org/W2068474065","https://openalex.org/W2074920675","https://openalex.org/W2099607215","https://openalex.org/W2103017472","https://openalex.org/W2103291381","https://openalex.org/W2116224763","https://openalex.org/W2118860683","https://openalex.org/W2120775215","https://openalex.org/W2127824649","https://openalex.org/W2128985829","https://openalex.org/W2138255346","https://openalex.org/W2143426320","https://openalex.org/W2150926065","https://openalex.org/W2154452346","https://openalex.org/W2157911533","https://openalex.org/W2158256579","https://openalex.org/W2171029115","https://openalex.org/W2174734928","https://openalex.org/W2329216661","https://openalex.org/W2329659234","https://openalex.org/W2482916550","https://openalex.org/W2537679995","https://openalex.org/W2611138580","https://openalex.org/W2615358397","https://openalex.org/W2728595591","https://openalex.org/W2729321619","https://openalex.org/W2768357765","https://openalex.org/W2810986024","https://openalex.org/W2885691164","https://openalex.org/W2905944409","https://openalex.org/W2924234733","https://openalex.org/W2945103729","https://openalex.org/W2968022676","https://openalex.org/W3014976078","https://openalex.org/W3094371180","https://openalex.org/W3094794966","https://openalex.org/W3102943483","https://openalex.org/W3122219789","https://openalex.org/W3130229455","https://openalex.org/W4206686222","https://openalex.org/W4237171445","https://openalex.org/W4254474549","https://openalex.org/W6981986846"],"related_works":["https://openalex.org/W2307569040","https://openalex.org/W2131941936","https://openalex.org/W2366067673","https://openalex.org/W1583422155","https://openalex.org/W2060096282","https://openalex.org/W2541393756","https://openalex.org/W1649619740","https://openalex.org/W2385643360","https://openalex.org/W3213252596","https://openalex.org/W1534006406"],"abstract_inverted_index":{"In":[0,77],"the":[1,17,38,68,73,83,95,98,106,124,139,146,151,163,172,185,188,194,209,242,260],"last":[2],"two":[3],"decades,":[4],"there":[5],"have":[6],"been":[7],"massive":[8],"advancements":[9],"in":[10,16,67,181],"high":[11],"throughput":[12],"technologies,":[13],"which":[14,155],"resulted":[15],"exponential":[18],"growth":[19],"of":[20,23,82,97,118,135,162,166,179,187,191,196,214,227,234,237,244,254,273],"public":[21],"repositories":[22],"gene":[24,39,126,147],"expression":[25,40,148],"datasets":[26],"for":[27,115,200,247,267],"various":[28,235],"phenotypes.":[29],"It":[30],"is":[31,129,156,169,257],"possible":[32],"to":[33,63,130,145,170,183,207,219,258,263],"unravel":[34],"biomarkers":[35],"by":[36],"comparing":[37],"levels":[41],"under":[42],"different":[43,177],"conditions,":[44],"such":[45],"as":[46,158,216,218],"disease":[47,223],"vs.":[48,51,56],"control,":[49],"treated":[50],"not":[52],"treated,":[53],"drug":[54,57],"A":[55],"B,":[58],"etc.":[59],"This":[60],"problem":[61,66],"refers":[62],"a":[64,132],"well-studied":[65],"machine":[69],"learning":[70],"domain,":[71],"i.e.,":[72],"feature":[74,85,111],"selection":[75,86,112,127],"problem.":[76],"biological":[78,99,107,152,238,280],"data":[79,250],"analysis,":[80],"most":[81],"computational":[84],"methodologies":[87],"were":[88],"taken":[89],"from":[90],"other":[91],"fields,":[92],"without":[93],"considering":[94,137],"nature":[96],"data.":[100,119],"Thus,":[101],"integrative":[102,125,203],"approaches":[103,204,266],"that":[104,142,175],"utilize":[105],"knowledge":[108],"while":[109],"performing":[110],"are":[113,143,205],"necessary":[114],"this":[116,167,255],"kind":[117],"The":[120,232],"main":[121,164],"idea":[122],"behind":[123],"process":[128],"generate":[131],"ranked":[133],"list":[134],"genes":[136],"both":[138],"statistical":[140],"metrics":[141],"applied":[144],"data,":[149],"and":[150,193,212,230,249,269],"background":[153],"information":[154,180,239],"provided":[157],"external":[159],"datasets.":[160],"One":[161],"goals":[165],"review":[168,256],"explore":[171],"existing":[173],"methods":[174],"integrate":[176],"types":[178,236],"order":[182],"improve":[184],"identification":[186],"biomolecular":[189],"signatures":[190],"diseases":[192],"discovery":[195],"new":[197,265],"potential":[198],"targets":[199],"treatment.":[201],"These":[202],"expected":[206],"aid":[208],"prediction,":[210],"diagnosis,":[211],"treatment":[213],"diseases,":[215],"well":[217],"enlighten":[220],"us":[221],"on":[222,276],"state":[224],"dynamics,":[225],"mechanisms":[226],"their":[228],"onset":[229],"progression.":[231],"integration":[233,248],"will":[240],"necessitate":[241],"development":[243],"novel":[245],"techniques":[246],"analysis.":[251],"Another":[252],"aim":[253],"boost":[259],"bioinformatics":[261],"community":[262],"develop":[264],"searching":[268],"determining":[270],"significant":[271],"groups/clusters":[272],"features":[274],"based":[275],"one":[277],"or":[278],"more":[279],"grouping":[281],"functions.":[282]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":19},{"year":2022,"cited_by_count":25},{"year":2021,"cited_by_count":7}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
