{"id":"https://openalex.org/W3016799468","doi":"https://doi.org/10.3390/data5020037","title":"U-Net Segmented Adjacent Angle Detection (USAAD) for Automatic Analysis of Corneal Nerve Structures","display_name":"U-Net Segmented Adjacent Angle Detection (USAAD) for Automatic Analysis of Corneal Nerve Structures","publication_year":2020,"publication_date":"2020-04-14","ids":{"openalex":"https://openalex.org/W3016799468","doi":"https://doi.org/10.3390/data5020037","mag":"3016799468"},"language":"en","primary_location":{"id":"doi:10.3390/data5020037","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data5020037","pdf_url":"https://www.mdpi.com/2306-5729/5/2/37/pdf?version=1586866063","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2306-5729/5/2/37/pdf?version=1586866063","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053380113","display_name":"Philip Mehrgardt","orcid":"https://orcid.org/0000-0002-4743-9980"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Philip Mehrgardt","raw_affiliation_strings":["School of Computer Science, The University of Sydney, NSW 2006, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, The University of Sydney, NSW 2006, Australia","institution_ids":["https://openalex.org/I129604602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044200395","display_name":"Seid Miad Zandavi","orcid":"https://orcid.org/0000-0003-3015-5962"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Seid Miad Zandavi","raw_affiliation_strings":["School of Computer Science, The University of Sydney, NSW 2006, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, The University of Sydney, NSW 2006, Australia","institution_ids":["https://openalex.org/I129604602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003933623","display_name":"Simon Poon","orcid":"https://orcid.org/0000-0003-2726-9109"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Simon K. Poon","raw_affiliation_strings":["School of Computer Science, The University of Sydney, NSW 2006, Australia"],"raw_orcid":"https://orcid.org/0000-0003-2726-9109","affiliations":[{"raw_affiliation_string":"School of Computer Science, The University of Sydney, NSW 2006, Australia","institution_ids":["https://openalex.org/I129604602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024866431","display_name":"Juno Kim","orcid":"https://orcid.org/0000-0003-1300-9875"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Juno Kim","raw_affiliation_strings":["School of Optometry and Vision Science, University of New South Wales, Sydney, NSW 2052, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Optometry and Vision Science, University of New South Wales, Sydney, NSW 2052, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011861221","display_name":"Maria Markoulli","orcid":"https://orcid.org/0000-0002-9227-5866"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Maria Markoulli","raw_affiliation_strings":["School of Optometry and Vision Science, University of New South Wales, Sydney, NSW 2052, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Optometry and Vision Science, University of New South Wales, Sydney, NSW 2052, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030777395","display_name":"Matloob Khushi","orcid":"https://orcid.org/0000-0001-7792-2327"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Matloob Khushi","raw_affiliation_strings":["School of Computer Science, The University of Sydney, NSW 2006, Australia"],"raw_orcid":"https://orcid.org/0000-0001-7792-2327","affiliations":[{"raw_affiliation_string":"School of Computer Science, The University of Sydney, NSW 2006, Australia","institution_ids":["https://openalex.org/I129604602"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5030777395"],"corresponding_institution_ids":["https://openalex.org/I129604602"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":2.3439,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.89156719,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"5","issue":"2","first_page":"37","last_page":"37"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10997","display_name":"Ocular Surface and Contact Lens","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10997","display_name":"Ocular Surface and Contact Lens","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10563","display_name":"Corneal surgery and disorders","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10250","display_name":"Glaucoma and retinal disorders","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2731","display_name":"Ophthalmology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tortuosity","display_name":"Tortuosity","score":0.9612677097320557},{"id":"https://openalex.org/keywords/grading","display_name":"Grading (engineering)","score":0.631458044052124},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.42307668924331665},{"id":"https://openalex.org/keywords/confocal-microscopy","display_name":"Confocal microscopy","score":0.4120739996433258},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.409811407327652},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.33242154121398926},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.32251453399658203},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3049335479736328},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.2770388126373291},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.22084861993789673},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.14063933491706848},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09196627140045166}],"concepts":[{"id":"https://openalex.org/C185250623","wikidata":"https://www.wikidata.org/wiki/Q2301683","display_name":"Tortuosity","level":3,"score":0.9612677097320557},{"id":"https://openalex.org/C2777286243","wikidata":"https://www.wikidata.org/wiki/Q5591926","display_name":"Grading (engineering)","level":2,"score":0.631458044052124},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.42307668924331665},{"id":"https://openalex.org/C2779178360","wikidata":"https://www.wikidata.org/wiki/Q902045","display_name":"Confocal microscopy","level":2,"score":0.4120739996433258},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.409811407327652},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.33242154121398926},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.32251453399658203},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3049335479736328},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.2770388126373291},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.22084861993789673},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.14063933491706848},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09196627140045166},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C6648577","wikidata":"https://www.wikidata.org/wiki/Q622669","display_name":"Porosity","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/data5020037","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data5020037","pdf_url":"https://www.mdpi.com/2306-5729/5/2/37/pdf?version=1586866063","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:gam:jdataj:v:5:y:2020:i:2:p:37-:d:345329","is_oa":false,"landing_page_url":"https://www.mdpi.com/2306-5729/5/2/37/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:4bd86779b7954c52bbade9dcd98d82a9","is_oa":true,"landing_page_url":"https://doaj.org/article/4bd86779b7954c52bbade9dcd98d82a9","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data, Vol 5, Iss 2, p 37 (2020)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2306-5729/5/2/37/","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3390/data5020037","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/data5020037","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data5020037","pdf_url":"https://www.mdpi.com/2306-5729/5/2/37/pdf?version=1586866063","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3016799468.pdf","grobid_xml":"https://content.openalex.org/works/W3016799468.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1527371614","https://openalex.org/W1686810756","https://openalex.org/W1901129140","https://openalex.org/W2042805349","https://openalex.org/W2044548760","https://openalex.org/W2048729493","https://openalex.org/W2088569154","https://openalex.org/W2094547577","https://openalex.org/W2096121163","https://openalex.org/W2103913084","https://openalex.org/W2125192579","https://openalex.org/W2138480916","https://openalex.org/W2143990159","https://openalex.org/W2154148861","https://openalex.org/W2163605009","https://openalex.org/W2341173374","https://openalex.org/W2481588993","https://openalex.org/W2535961850","https://openalex.org/W2752023331","https://openalex.org/W2769855772","https://openalex.org/W2779118454","https://openalex.org/W2891749770","https://openalex.org/W2940166463","https://openalex.org/W2949426982","https://openalex.org/W2972052374","https://openalex.org/W2997063798","https://openalex.org/W6684191040","https://openalex.org/W6746370290"],"related_works":["https://openalex.org/W3101152546","https://openalex.org/W2015139878","https://openalex.org/W2497324722","https://openalex.org/W4242461735","https://openalex.org/W2050474108","https://openalex.org/W3189172001","https://openalex.org/W4200526323","https://openalex.org/W2771232776","https://openalex.org/W3035278006","https://openalex.org/W2909739621"],"abstract_inverted_index":{"Measurement":[0],"of":[1,16,39,94,153,164,179,184,207,210],"corneal":[2,40],"nerve":[3,69,100,146,198],"tortuosity":[4,22,51,117,128,154],"is":[5],"associated":[6],"with":[7,50,91,138,156,168],"dry":[8],"eye":[9],"disease,":[10],"diabetic":[11],"retinopathy,":[12],"and":[13,44,99,107,111,115,212],"a":[14,55,67,72,89,92,176,204],"range":[15],"other":[17,171],"conditions.":[18],"However,":[19],"clinicians":[20,126],"measure":[21,206],"on":[23,54,127],"very":[24],"different":[25],"grading":[26,133],"scales":[27],"that":[28,149,174],"are":[29],"inherently":[30],"subjective.":[31],"Using":[32],"in":[33,186,197],"vivo":[34],"confocal":[35],"microscopy,":[36],"253":[37],"images":[38,98],"nerves":[41],"were":[42,109],"captured":[43],"manually":[45],"labelled":[46],"by":[47,65,87,119],"two":[48],"researchers":[49],"measurements":[52],"ranging":[53],"scale":[56],"from":[57],"0.1":[58],"to":[59,170,190],"1.0.":[60],"Tortuosity":[61],"was":[62,85,135],"estimated":[63],"computationally":[64],"extracting":[66],"binarised":[68],"structure":[70,101],"utilising":[71],"previously":[73],"published":[74],"method.":[75],"A":[76],"novel":[77],"U-Net":[78,90],"segmented":[79],"adjacent":[80],"angle":[81,141],"detection":[82],"(USAAD)":[83],"method":[84,167],"developed":[86],"training":[88,114],"series":[93],"back":[95],"feeding":[96],"processed":[97],"vectorizations.":[102],"Angles":[103],"between":[104],"all":[105],"vectors":[106],"segments":[108],"measured":[110,118],"used":[112],"for":[113,200],"predicting":[116],"human":[120,157],"labelling.":[121],"Despite":[122],"the":[123,131,145,151,162,208],"disagreement":[124],"among":[125],"labelling":[129],"measures,":[130],"optimised":[132,150],"measurement":[134],"significantly":[136],"correlated":[137],"our":[139,165],"USAAD":[140,185],"measurements.":[142],"We":[143,159],"identified":[144],"interval":[147],"lengths":[148],"correlation":[152],"estimates":[155],"grading.":[158],"also":[160],"show":[161],"merit":[163],"proposed":[166],"respect":[169],"baseline":[172],"methods":[173],"provide":[175,191],"single":[177],"estimate":[178],"tortuosity.":[180],"The":[181],"real":[182],"benefit":[183],"future":[187],"will":[188],"be":[189],"comprehensive":[192],"structural":[193],"information":[194],"about":[195],"variations":[196],"orientation":[199],"potential":[201],"use":[202],"as":[203],"clinical":[205],"presence":[209],"disease":[211],"its":[213],"progression.":[214]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
