{"id":"https://openalex.org/W2989566745","doi":"https://doi.org/10.3390/data4040149","title":"The Eminence of Co-Expressed Ties in Schizophrenia Network Communities","display_name":"The Eminence of Co-Expressed Ties in Schizophrenia Network Communities","publication_year":2019,"publication_date":"2019-11-29","ids":{"openalex":"https://openalex.org/W2989566745","doi":"https://doi.org/10.3390/data4040149","mag":"2989566745"},"language":"en","primary_location":{"id":"doi:10.3390/data4040149","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data4040149","pdf_url":"https://www.mdpi.com/2306-5729/4/4/149/pdf?version=1576741304","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2306-5729/4/4/149/pdf?version=1576741304","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052903093","display_name":"Amulyashree Sridhar","orcid":"https://orcid.org/0000-0002-3902-7740"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Amulyashree Sridhar","raw_affiliation_strings":["Department of Computer Science and Engineering, RV College of Engineering, Bangalore 560059, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, RV College of Engineering, Bangalore 560059, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004924182","display_name":"G S Sharvani","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sharvani GS","raw_affiliation_strings":["Department of Computer Science and Engineering, RV College of Engineering, Bangalore 560059, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, RV College of Engineering, Bangalore 560059, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101710932","display_name":"Manjunatha Reddy","orcid":"https://orcid.org/0000-0002-6584-8171"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"AH Manjunatha Reddy","raw_affiliation_strings":["Department of Biotechnology, RV College of Engineering, Bangalore 560059, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, RV College of Engineering, Bangalore 560059, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017001103","display_name":"Biplab Bhattacharjee","orcid":"https://orcid.org/0000-0002-3886-8409"},"institutions":[{"id":"https://openalex.org/I81556334","display_name":"Amrita Vishwa Vidyapeetham","ror":"https://ror.org/03am10p12","country_code":"IN","type":"education","lineage":["https://openalex.org/I81556334"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Biplab Bhattacharjee","raw_affiliation_strings":["Department of Management, Amrita Vishwa Vidyapeetham, Amritapuri, Kollam 690525, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Management, Amrita Vishwa Vidyapeetham, Amritapuri, Kollam 690525, India","institution_ids":["https://openalex.org/I81556334"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081519077","display_name":"Kalyan Nagaraj","orcid":"https://orcid.org/0000-0001-6495-3132"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kalyan Nagaraj","raw_affiliation_strings":["Department of Computer Science and Engineering, RV College of Engineering, Bangalore 560059, India"],"raw_orcid":"https://orcid.org/0000-0001-6495-3132","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, RV College of Engineering, Bangalore 560059, India","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5052903093"],"corresponding_institution_ids":[],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11359072,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"4","issue":"4","first_page":"149","last_page":"149"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13283","display_name":"Mental Health Research Topics","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/3205","display_name":"Experimental and Cognitive Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/modularity","display_name":"Modularity (biology)","score":0.7365731000900269},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5318602919578552},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.531290590763092},{"id":"https://openalex.org/keywords/nonlinear-system","display_name":"Nonlinear system","score":0.46329960227012634},{"id":"https://openalex.org/keywords/schizophrenia","display_name":"Schizophrenia (object-oriented programming)","score":0.433878630399704},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.4286589026451111},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.42494115233421326},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.4172448217868805},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40602245926856995},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3628944754600525},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.35648056864738464},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33063602447509766},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.32662710547447205},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3041197657585144},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2699872851371765},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2683568298816681},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1648692488670349},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.10112753510475159},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08416199684143066}],"concepts":[{"id":"https://openalex.org/C2779478453","wikidata":"https://www.wikidata.org/wiki/Q6889748","display_name":"Modularity (biology)","level":2,"score":0.7365731000900269},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5318602919578552},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.531290590763092},{"id":"https://openalex.org/C158622935","wikidata":"https://www.wikidata.org/wiki/Q660848","display_name":"Nonlinear system","level":2,"score":0.46329960227012634},{"id":"https://openalex.org/C2776412080","wikidata":"https://www.wikidata.org/wiki/Q7431605","display_name":"Schizophrenia (object-oriented programming)","level":2,"score":0.433878630399704},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.4286589026451111},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.42494115233421326},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.4172448217868805},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40602245926856995},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3628944754600525},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35648056864738464},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33063602447509766},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.32662710547447205},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3041197657585144},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2699872851371765},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2683568298816681},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1648692488670349},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.10112753510475159},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08416199684143066},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/data4040149","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data4040149","pdf_url":"https://www.mdpi.com/2306-5729/4/4/149/pdf?version=1576741304","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:gam:jdataj:v:4:y:2019:i:4:p:149-:d:292320","is_oa":false,"landing_page_url":"https://www.mdpi.com/2306-5729/4/4/149/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2306-5729/4/4/149/","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3390/data4040149","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/data4040149","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data4040149","pdf_url":"https://www.mdpi.com/2306-5729/4/4/149/pdf?version=1576741304","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2989566745.pdf","grobid_xml":"https://content.openalex.org/works/W2989566745.grobid-xml"},"referenced_works_count":82,"referenced_works":["https://openalex.org/W188105834","https://openalex.org/W599782373","https://openalex.org/W1491379303","https://openalex.org/W1555366957","https://openalex.org/W1565350250","https://openalex.org/W1595379164","https://openalex.org/W1743429370","https://openalex.org/W1781719596","https://openalex.org/W1855731729","https://openalex.org/W1971421925","https://openalex.org/W1980341945","https://openalex.org/W1997418665","https://openalex.org/W2004469093","https://openalex.org/W2006907839","https://openalex.org/W2033166913","https://openalex.org/W2037098808","https://openalex.org/W2041951497","https://openalex.org/W2053186076","https://openalex.org/W2061509809","https://openalex.org/W2063639254","https://openalex.org/W2077776048","https://openalex.org/W2083585474","https://openalex.org/W2089458547","https://openalex.org/W2097216034","https://openalex.org/W2098062695","https://openalex.org/W2103017472","https://openalex.org/W2106926455","https://openalex.org/W2109469951","https://openalex.org/W2117575003","https://openalex.org/W2125910575","https://openalex.org/W2130148029","https://openalex.org/W2131681506","https://openalex.org/W2140462113","https://openalex.org/W2141113219","https://openalex.org/W2145178659","https://openalex.org/W2151191578","https://openalex.org/W2152495216","https://openalex.org/W2155677028","https://openalex.org/W2157082398","https://openalex.org/W2157582645","https://openalex.org/W2158200838","https://openalex.org/W2159482845","https://openalex.org/W2163046930","https://openalex.org/W2164928285","https://openalex.org/W2164998314","https://openalex.org/W2165891030","https://openalex.org/W2169803818","https://openalex.org/W2300879143","https://openalex.org/W2325919353","https://openalex.org/W2474134945","https://openalex.org/W2483498315","https://openalex.org/W2497752945","https://openalex.org/W2531144091","https://openalex.org/W2537679995","https://openalex.org/W2599306300","https://openalex.org/W2604175478","https://openalex.org/W2612788503","https://openalex.org/W2782100502","https://openalex.org/W2785334206","https://openalex.org/W2788513991","https://openalex.org/W2896481393","https://openalex.org/W2898992240","https://openalex.org/W2905116448","https://openalex.org/W2905490201","https://openalex.org/W2912337065","https://openalex.org/W2922454355","https://openalex.org/W2946293546","https://openalex.org/W2947850792","https://openalex.org/W2952377308","https://openalex.org/W3099768174","https://openalex.org/W3101738797","https://openalex.org/W3103596987","https://openalex.org/W3104267360","https://openalex.org/W3142588439","https://openalex.org/W4251051452","https://openalex.org/W4294216483","https://openalex.org/W4399639051","https://openalex.org/W4399640133","https://openalex.org/W6607628490","https://openalex.org/W6721955733","https://openalex.org/W6761093422","https://openalex.org/W6785801320"],"related_works":["https://openalex.org/W4230687177","https://openalex.org/W1968829728","https://openalex.org/W2349859869","https://openalex.org/W4316651471","https://openalex.org/W2051365847","https://openalex.org/W2367249529","https://openalex.org/W3120118008","https://openalex.org/W2088885441","https://openalex.org/W4214765864","https://openalex.org/W2989101133"],"abstract_inverted_index":{"Exploring":[0],"gene":[1,107,120,188],"networks":[2,184],"is":[3,66],"crucial":[4],"for":[5,105,185],"identifying":[6],"significant":[7],"biological":[8,158,173],"interactions":[9,16],"occurring":[10],"in":[11,160,172],"a":[12,62,100,123],"disease":[13],"condition.":[14],"These":[15,92,150],"can":[17,177],"be":[18,178],"acknowledged":[19],"by":[20,98,144],"modeling":[21],"the":[22,40,57,79,90,146,161,167],"tie":[23,28,148,170],"structure":[24],"of":[25,39,72,127,163,169],"networks.":[26,174],"Such":[27],"orientations":[29],"are":[30,45,82,95,142,153],"often":[31],"detected":[32,151],"within":[33],"embedded":[34],"community":[35,42,133],"structures.":[36,149],"However,":[37],"most":[38],"prevailing":[41],"detection":[43,134],"modules":[44,121],"intended":[46],"to":[47,85,130,155],"capture":[48],"information":[49],"from":[50],"nodes":[51],"and":[52],"its":[53],"attributes,":[54],"usually":[55],"ignoring":[56],"ties.":[58],"In":[59],"this":[60,117],"study,":[61],"modularity":[63,125],"maximization":[64],"algorithm":[65,118],"proposed":[67],"based":[68,109],"on":[69,110,181],"nonlinear":[70,101],"representation":[71],"local":[73,93],"tangent":[74,80],"space":[75],"alignment":[76],"(LTSA).":[77],"Initially,":[78],"coordinates":[81],"computed":[83],"locally":[84],"identify":[86],"k-nearest":[87],"neighbors":[88,94],"across":[89,139],"genes.":[91],"further":[96],"optimized":[97],"generating":[99],"network":[102],"embedding":[103],"function":[104],"detecting":[106,186],"communities":[108,141],"eigenvector":[111],"decomposition.":[112],"Experimental":[113],"results":[114],"suggest":[115],"that":[116],"detects":[119],"with":[122],"better":[124],"index":[126],"0.9256,":[128],"compared":[129],"other":[131,182],"traditional":[132],"algorithms.":[135],"Furthermore,":[136],"co-expressed":[137],"genes":[138],"these":[140],"identified":[143],"discovering":[145],"characteristic":[147],"ties":[152],"known":[154],"have":[156],"substantial":[157,187],"influence":[159,168],"progression":[162],"schizophrenia,":[164],"thereby":[165],"signifying":[166],"patterns":[171],"This":[175],"technique":[176],"extended":[179],"logically":[180],"diseases":[183],"\u201chotspots\u201d.":[189]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
