{"id":"https://openalex.org/W2525277665","doi":"https://doi.org/10.3390/data1030017","title":"SNiPhunter: A SNP-Based Search Engine","display_name":"SNiPhunter: A SNP-Based Search Engine","publication_year":2016,"publication_date":"2016-09-29","ids":{"openalex":"https://openalex.org/W2525277665","doi":"https://doi.org/10.3390/data1030017","mag":"2525277665"},"language":"en","primary_location":{"id":"doi:10.3390/data1030017","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data1030017","pdf_url":"https://www.mdpi.com/2306-5729/1/3/17/pdf?version=1475141370","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2306-5729/1/3/17/pdf?version=1475141370","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038837940","display_name":"Werner Pieter Veldsman","orcid":"https://orcid.org/0000-0001-9837-8332"},"institutions":[{"id":"https://openalex.org/I869660684","display_name":"University of the Western Cape","ror":"https://ror.org/00h2vm590","country_code":"ZA","type":"education","lineage":["https://openalex.org/I869660684"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Werner Veldsman","raw_affiliation_strings":["South African National Bioinformatics Institute, University of the Western Cape, Bellville 7535, South Africa"],"affiliations":[{"raw_affiliation_string":"South African National Bioinformatics Institute, University of the Western Cape, Bellville 7535, South Africa","institution_ids":["https://openalex.org/I869660684"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090452966","display_name":"Alan Christoffels","orcid":"https://orcid.org/0000-0002-0420-2916"},"institutions":[{"id":"https://openalex.org/I869660684","display_name":"University of the Western Cape","ror":"https://ror.org/00h2vm590","country_code":"ZA","type":"education","lineage":["https://openalex.org/I869660684"]}],"countries":["ZA"],"is_corresponding":true,"raw_author_name":"Alan Christoffels","raw_affiliation_strings":["South African National Bioinformatics Institute, University of the Western Cape, Bellville 7535, South Africa"],"affiliations":[{"raw_affiliation_string":"South African National Bioinformatics Institute, University of the Western Cape, Bellville 7535, South Africa","institution_ids":["https://openalex.org/I869660684"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5090452966"],"corresponding_institution_ids":["https://openalex.org/I869660684"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":0.1743,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.65255295,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"1","issue":"3","first_page":"17","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8747037053108215},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6066675186157227},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.5814718008041382},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5643132925033569},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.526427149772644},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.46839094161987305},{"id":"https://openalex.org/keywords/artifact","display_name":"Artifact (error)","score":0.46346110105514526},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.45184847712516785},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.4508313238620758},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3799486756324768},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.29946643114089966},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11947092413902283}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8747037053108215},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6066675186157227},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.5814718008041382},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5643132925033569},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.526427149772644},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.46839094161987305},{"id":"https://openalex.org/C2779010991","wikidata":"https://www.wikidata.org/wiki/Q2720909","display_name":"Artifact (error)","level":2,"score":0.46346110105514526},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.45184847712516785},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.4508313238620758},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3799486756324768},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.29946643114089966},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11947092413902283}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/data1030017","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data1030017","pdf_url":"https://www.mdpi.com/2306-5729/1/3/17/pdf?version=1475141370","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:gam:jdataj:v:1:y:2016:i:3:p:17-:d:79458","is_oa":false,"landing_page_url":"https://www.mdpi.com/2306-5729/1/3/17/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2306-5729/1/3/17/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/data1030017","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data; Volume 1; Issue 3; Pages: 17","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/data1030017","is_oa":true,"landing_page_url":"https://doi.org/10.3390/data1030017","pdf_url":"https://www.mdpi.com/2306-5729/1/3/17/pdf?version=1475141370","source":{"id":"https://openalex.org/S4210226510","display_name":"Data","issn_l":"2306-5729","issn":["2306-5729"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2525277665.pdf","grobid_xml":"https://content.openalex.org/works/W2525277665.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W2097898123","https://openalex.org/W2116540200","https://openalex.org/W2118527670","https://openalex.org/W2122732537","https://openalex.org/W2131285447","https://openalex.org/W2132073122","https://openalex.org/W2149992227","https://openalex.org/W2171374484","https://openalex.org/W2298606604","https://openalex.org/W6697760712"],"related_works":["https://openalex.org/W2341492732","https://openalex.org/W3187193180","https://openalex.org/W106542691","https://openalex.org/W4378651134","https://openalex.org/W1699080303","https://openalex.org/W2944823289","https://openalex.org/W4297799326","https://openalex.org/W3116064965","https://openalex.org/W4287027380","https://openalex.org/W3193760048"],"abstract_inverted_index":{"Procuring":[0],"biomedical":[1],"literature":[2,15],"is":[3,76],"a":[4,27,53,91,104,125,133],"time-consuming":[5],"process.":[6],"The":[7,37],"genomic":[8],"sciences":[9],"software":[10],"solution":[11],"described":[12],"here":[13],"indexes":[14],"from":[16,158],"Pubmed":[17],"Central\u2019s":[18],"open":[19],"access":[20],"initiative,":[21],"and":[22,30,132,147],"makes":[23],"it":[24,78],"available":[25],"as":[26,107,151,153],"web":[28],"application":[29,33],"through":[31],"an":[32,96,112],"programming":[34],"interface":[35],"(API).":[36],"purpose":[38],"of":[39,60,65,89,111],"this":[40,66,142],"tertiary":[41],"data":[42],"artifact\u2014called":[43],"SNiPhunter\u2014is":[44],"to":[45,52,81,86,102,108],"assist":[46],"researchers":[47],"in":[48,95,141],"finding":[49],"articles":[50],"relevant":[51],"reference":[54],"single":[55],"nucleotide":[56],"polymorphism":[57],"(SNP)":[58],"identifier":[59],"interest.":[61],"A":[62],"novel":[63],"feature":[64],"NoSQL":[67],"(not":[68],"only":[69],"structured":[70],"query":[71,135],"language)":[72],"database":[73],"search":[74],"engine":[75],"that":[77],"returns":[79],"results":[80],"the":[82,87,100,109,148],"user":[83,101],"ordered":[84],"according":[85],"amount":[88],"times":[90],"refSNP":[92],"has":[93],"appeared":[94],"article,":[97],"thereby":[98],"allowing":[99],"make":[103],"quantitative":[105],"estimate":[106],"relevance":[110],"article.":[113],"Queries":[114],"can":[115],"also":[116],"be":[117],"launched":[118],"using":[119],"author-defined":[120],"keywords.":[121],"Additional":[122],"features":[123],"include":[124],"variant":[126],"call":[127],"format":[128],"(VCF)":[129],"file":[130,136],"parser":[131],"multiple":[134],"upload":[137],"service.":[138],"Software":[139],"implementation":[140],"project":[143],"relied":[144],"on":[145],"Python":[146],"NodeJS":[149],"interpreter,":[150],"well":[152],"third":[154],"party":[155],"libraries":[156],"retrieved":[157],"Github.":[159]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
