{"id":"https://openalex.org/W4409729744","doi":"https://doi.org/10.3390/computers14050157","title":"Advanced Digital System for International Collaboration on Biosample-Oriented Research: A Multicriteria Query Tool for Real-Time Biosample and Patient Cohort Searches","display_name":"Advanced Digital System for International Collaboration on Biosample-Oriented Research: A Multicriteria Query Tool for Real-Time Biosample and Patient Cohort Searches","publication_year":2025,"publication_date":"2025-04-23","ids":{"openalex":"https://openalex.org/W4409729744","doi":"https://doi.org/10.3390/computers14050157"},"language":"en","primary_location":{"id":"doi:10.3390/computers14050157","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computers14050157","pdf_url":"https://www.mdpi.com/2073-431X/14/5/157/pdf?version=1745414468","source":{"id":"https://openalex.org/S4210228075","display_name":"Computers","issn_l":"2073-431X","issn":["2073-431X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2073-431X/14/5/157/pdf?version=1745414468","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5117276214","display_name":"Alexandros Fridas","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alexandros Fridas","raw_affiliation_strings":["Metabio, 542 50 Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Metabio, 542 50 Thessaloniki, Greece","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055240826","display_name":"Anna Bourouliti","orcid":"https://orcid.org/0000-0003-4904-5624"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anna Bourouliti","raw_affiliation_strings":["Metabio, 542 50 Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Metabio, 542 50 Thessaloniki, Greece","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5117276215","display_name":"Loukia Touramanidou","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Loukia Touramanidou","raw_affiliation_strings":["Metabio, 542 50 Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Metabio, 542 50 Thessaloniki, Greece","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008396653","display_name":"Desislava Ivanova","orcid":"https://orcid.org/0000-0002-6218-7363"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Desislava Ivanova","raw_affiliation_strings":["Metabio, 542 50 Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Metabio, 542 50 Thessaloniki, Greece","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064307246","display_name":"Konstantinos Votis","orcid":"https://orcid.org/0000-0001-6381-8326"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Kostantinos Votis","raw_affiliation_strings":["Metabio, 542 50 Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Metabio, 542 50 Thessaloniki, Greece","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025269046","display_name":"Panagiotis Katsaounis","orcid":"https://orcid.org/0000-0002-8858-9002"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Panagiotis Katsaounis","raw_affiliation_strings":["Metabio, 542 50 Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Metabio, 542 50 Thessaloniki, Greece","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5025269046","https://openalex.org/A5064307246"],"corresponding_institution_ids":[],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":1.8295,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.84566244,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"14","issue":"5","first_page":"157","last_page":"157"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5076354742050171}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5076354742050171}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.3390/computers14050157","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computers14050157","pdf_url":"https://www.mdpi.com/2073-431X/14/5/157/pdf?version=1745414468","source":{"id":"https://openalex.org/S4210228075","display_name":"Computers","issn_l":"2073-431X","issn":["2073-431X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:7b6b3933856449ba9fd46aa03ab54f39","is_oa":true,"landing_page_url":"https://doaj.org/article/7b6b3933856449ba9fd46aa03ab54f39","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computers, Vol 14, Iss 5, p 157 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3390/computers14050157","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computers14050157","pdf_url":"https://www.mdpi.com/2073-431X/14/5/157/pdf?version=1745414468","source":{"id":"https://openalex.org/S4210228075","display_name":"Computers","issn_l":"2073-431X","issn":["2073-431X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4409729744.pdf","grobid_xml":"https://content.openalex.org/works/W4409729744.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W2034551256","https://openalex.org/W2058401000","https://openalex.org/W2131941936","https://openalex.org/W2160799564","https://openalex.org/W2394693995","https://openalex.org/W2508645751","https://openalex.org/W2607067837","https://openalex.org/W2752621721","https://openalex.org/W2756588780","https://openalex.org/W2757643648","https://openalex.org/W2784042409","https://openalex.org/W2803692993","https://openalex.org/W2804330882","https://openalex.org/W2922617862","https://openalex.org/W2942255051","https://openalex.org/W2971130507","https://openalex.org/W3023389916","https://openalex.org/W3024563432","https://openalex.org/W3033436744","https://openalex.org/W3046739387","https://openalex.org/W3093025058","https://openalex.org/W3119380421","https://openalex.org/W3121622005","https://openalex.org/W3130449896","https://openalex.org/W3134221710","https://openalex.org/W3174400729","https://openalex.org/W3207617266","https://openalex.org/W4226173403","https://openalex.org/W4285315819","https://openalex.org/W4288033875","https://openalex.org/W4317904523","https://openalex.org/W4385889338","https://openalex.org/W4390942304","https://openalex.org/W4391883296","https://openalex.org/W4393257856","https://openalex.org/W4399614239","https://openalex.org/W4400592220","https://openalex.org/W4402131081","https://openalex.org/W4402581967","https://openalex.org/W4404128092","https://openalex.org/W4404425532","https://openalex.org/W4406314219","https://openalex.org/W6777079630","https://openalex.org/W6795193892","https://openalex.org/W6838676769"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"The":[0,83,172,208],"advancement":[1],"of":[2,177],"biomedical":[3,27,170],"research":[4,22,58,76,163],"depends":[5],"on":[6],"efficient":[7],"data":[8,38,52,118,136,213],"sharing,":[9],"integration,":[10,214],"and":[11,17,29,44,51,79,95,116,134,140,149,165,200,206,222,231],"annotation":[12],"to":[13,67,73,130,158,188,227],"ensure":[14],"reproducibility,":[15],"accessibility,":[16],"cross-disciplinary":[18],"collaboration.":[19],"International":[20],"collaborative":[21],"is":[23,174],"crucial":[24],"for":[25,49],"advancing":[26],"science":[28],"innovation":[30,176],"but":[31],"often":[32],"faces":[33],"significant":[34],"barriers,":[35],"such":[36,203],"as":[37,100,102,204],"sharing":[39],"limitations,":[40],"inefficient":[41],"sample":[42],"management,":[43,109],"scalability":[45],"challenges.":[46],"Existing":[47],"infrastructures":[48],"biosample":[50],"repositories":[53],"face":[54],"challenges":[55],"limiting":[56],"large-scale":[57],"efforts.":[59],"This":[60],"study":[61,154],"presents":[62],"a":[63,86,178],"novel":[64],"platform":[65,84,124],"designed":[66],"address":[68],"these":[69],"issues,":[70],"enabling":[71,225],"researchers":[72,226],"conduct":[74],"high-quality":[75],"more":[77],"efficiently":[78],"at":[80],"reduced":[81],"costs.":[82],"employs":[85],"modular,":[87],"distributed":[88],"architecture":[89,148],"that":[90],"ensures":[91],"high":[92],"availability,":[93],"redundancy,":[94],"interoperability":[96],"among":[97],"diverse":[98],"stakeholders,":[99],"well":[101],"integrates":[103],"advanced":[104],"features,":[105],"including":[106,215],"secure":[107],"access":[108],"comprehensive":[110,233],"query":[111],"functionalities,":[112],"real-time":[113,179],"availability":[114],"reporting,":[115],"robust":[117],"mining":[119],"capabilities.":[120],"In":[121],"addition,":[122],"this":[123,153],"supports":[125,211],"dynamic,":[126],"multi-criteria":[127],"searches":[128],"tailored":[129],"disease-specific":[131],"patient":[132],"profiles":[133],"biosample-related":[135],"across":[137],"pre-analytical,":[138],"post-analytical,":[139],"cryo-storage":[141],"processes.":[142],"By":[143],"evaluating":[144],"the":[145,175],"platform\u2019s":[146],"modular":[147],"pilot":[150],"testing":[151],"outcomes,":[152],"demonstrates":[155],"its":[156],"potential":[157],"enhance":[159],"interdisciplinary":[160],"collaboration,":[161],"streamline":[162],"workflows,":[164],"foster":[166],"transformative":[167],"advancements":[168],"in":[169,193],"research.":[171],"key":[173],"dynamic":[180],"e-consent":[181],"(DRT":[182],"e-consent)":[183],"system,":[184],"which":[185],"allows":[186],"donors":[187],"update":[189],"their":[190],"consent":[191],"status":[192],"real":[194],"time,":[195],"ensuring":[196],"compliance":[197],"with":[198],"ethical":[199],"regulatory":[201],"frameworks":[202],"GDPR":[205],"HIPAA.":[207],"system":[209],"also":[210],"multi-modal":[212],"genomic":[216],"sequences,":[217],"electronic":[218],"health":[219],"records":[220],"(EHRs),":[221],"imaging":[223],"data,":[224],"perform":[228],"complex":[229],"queries":[230],"generate":[232],"insights.":[234]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-02T15:55:50.835912","created_date":"2025-10-10T00:00:00"}
