{"id":"https://openalex.org/W2727113354","doi":"https://doi.org/10.3390/computation5030032","title":"Anomalous Diffusion within the Transcriptome as a Bio-Inspired Computing Framework for Resilience","display_name":"Anomalous Diffusion within the Transcriptome as a Bio-Inspired Computing Framework for Resilience","publication_year":2017,"publication_date":"2017-07-04","ids":{"openalex":"https://openalex.org/W2727113354","doi":"https://doi.org/10.3390/computation5030032","mag":"2727113354"},"language":"en","primary_location":{"id":"doi:10.3390/computation5030032","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computation5030032","pdf_url":"https://www.mdpi.com/2079-3197/5/3/32/pdf?version=1500448093","source":{"id":"https://openalex.org/S2738402919","display_name":"Computation","issn_l":"2079-3197","issn":["2079-3197"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2079-3197/5/3/32/pdf?version=1500448093","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060269705","display_name":"William Seffens","orcid":"https://orcid.org/0000-0002-5657-1852"},"institutions":[{"id":"https://openalex.org/I6332465","display_name":"Morehouse School of Medicine","ror":"https://ror.org/01pbhra64","country_code":"US","type":"education","lineage":["https://openalex.org/I6332465"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"William Seffens","raw_affiliation_strings":["Physiology Department, Morehouse School of Medicine, Atlanta, GA 30310, USA","Seftec, Incorporated, Atlanta, GA 30318 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Physiology Department, Morehouse School of Medicine, Atlanta, GA 30310, USA","institution_ids":["https://openalex.org/I6332465"]},{"raw_affiliation_string":"Seftec, Incorporated, Atlanta, GA 30318 USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5060269705"],"corresponding_institution_ids":["https://openalex.org/I6332465"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.1093,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49239352,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"5","issue":"3","first_page":"32","last_page":"32"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11445","display_name":"Origins and Evolution of Life","score":0.9787999987602234,"subfield":{"id":"https://openalex.org/subfields/3103","display_name":"Astronomy and Astrophysics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7044886350631714},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.6364660859107971},{"id":"https://openalex.org/keywords/turing","display_name":"Turing","score":0.5244798064231873},{"id":"https://openalex.org/keywords/social-connectedness","display_name":"Social connectedness","score":0.5150129795074463},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.49811244010925293},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.495730996131897},{"id":"https://openalex.org/keywords/resilience","display_name":"Resilience (materials science)","score":0.4910564422607422},{"id":"https://openalex.org/keywords/turing-machine","display_name":"Turing machine","score":0.4881487786769867},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4551652669906616},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3588407039642334},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.3288276195526123},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3283567428588867},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.22488069534301758},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17249450087547302},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.09606686234474182}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7044886350631714},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.6364660859107971},{"id":"https://openalex.org/C9870796","wikidata":"https://www.wikidata.org/wiki/Q490481","display_name":"Turing","level":2,"score":0.5244798064231873},{"id":"https://openalex.org/C201943243","wikidata":"https://www.wikidata.org/wiki/Q7551008","display_name":"Social connectedness","level":2,"score":0.5150129795074463},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.49811244010925293},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.495730996131897},{"id":"https://openalex.org/C2779585090","wikidata":"https://www.wikidata.org/wiki/Q3457762","display_name":"Resilience (materials science)","level":2,"score":0.4910564422607422},{"id":"https://openalex.org/C29248071","wikidata":"https://www.wikidata.org/wiki/Q163310","display_name":"Turing machine","level":3,"score":0.4881487786769867},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4551652669906616},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3588407039642334},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.3288276195526123},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3283567428588867},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.22488069534301758},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17249450087547302},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.09606686234474182},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/computation5030032","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computation5030032","pdf_url":"https://www.mdpi.com/2079-3197/5/3/32/pdf?version=1500448093","source":{"id":"https://openalex.org/S2738402919","display_name":"Computation","issn_l":"2079-3197","issn":["2079-3197"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:c2c426909002463d8fda853ce16719c7","is_oa":true,"landing_page_url":"https://doaj.org/article/c2c426909002463d8fda853ce16719c7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computation, Vol 5, Iss 3, p 32 (2017)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2079-3197/5/3/32/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/computation5030032","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computation; Volume 5; Issue 3; Pages: 32","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/computation5030032","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computation5030032","pdf_url":"https://www.mdpi.com/2079-3197/5/3/32/pdf?version=1500448093","source":{"id":"https://openalex.org/S2738402919","display_name":"Computation","issn_l":"2079-3197","issn":["2079-3197"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3007649396","display_name":null,"funder_award_id":"8U54MD007588","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6347279283","display_name":null,"funder_award_id":"G12MD007602","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8062645495","display_name":null,"funder_award_id":"P30 HL107238","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2727113354.pdf"},"referenced_works_count":63,"referenced_works":["https://openalex.org/W132217660","https://openalex.org/W161017821","https://openalex.org/W191183683","https://openalex.org/W312187425","https://openalex.org/W642411599","https://openalex.org/W1478243168","https://openalex.org/W1512383952","https://openalex.org/W1516725900","https://openalex.org/W1544137146","https://openalex.org/W1553944319","https://openalex.org/W1562444618","https://openalex.org/W1565012712","https://openalex.org/W1595978815","https://openalex.org/W1981689130","https://openalex.org/W1981700764","https://openalex.org/W1981777743","https://openalex.org/W1982562602","https://openalex.org/W1985844219","https://openalex.org/W1994827104","https://openalex.org/W2003030069","https://openalex.org/W2007652184","https://openalex.org/W2026921415","https://openalex.org/W2036549501","https://openalex.org/W2044901316","https://openalex.org/W2047363288","https://openalex.org/W2052495152","https://openalex.org/W2054984152","https://openalex.org/W2056048178","https://openalex.org/W2065533060","https://openalex.org/W2069900357","https://openalex.org/W2072396808","https://openalex.org/W2078361986","https://openalex.org/W2079779258","https://openalex.org/W2084625851","https://openalex.org/W2090729315","https://openalex.org/W2104171348","https://openalex.org/W2104627123","https://openalex.org/W2105726520","https://openalex.org/W2118044993","https://openalex.org/W2122510010","https://openalex.org/W2129137649","https://openalex.org/W2132918077","https://openalex.org/W2136170223","https://openalex.org/W2137130066","https://openalex.org/W2144898640","https://openalex.org/W2146879413","https://openalex.org/W2151554678","https://openalex.org/W2153268540","https://openalex.org/W2154683756","https://openalex.org/W2156106639","https://openalex.org/W2158708642","https://openalex.org/W2172122763","https://openalex.org/W2395284556","https://openalex.org/W2410681945","https://openalex.org/W2543580944","https://openalex.org/W2754278758","https://openalex.org/W4213333889","https://openalex.org/W4246565613","https://openalex.org/W4299796063","https://openalex.org/W6605365863","https://openalex.org/W6630765715","https://openalex.org/W6661954828","https://openalex.org/W6682642761"],"related_works":["https://openalex.org/W2119244842","https://openalex.org/W3160192459","https://openalex.org/W4324016496","https://openalex.org/W2215138167","https://openalex.org/W4231495498","https://openalex.org/W4312201671","https://openalex.org/W4254404873","https://openalex.org/W2621831792","https://openalex.org/W2090113742","https://openalex.org/W2053429109"],"abstract_inverted_index":{"Much":[0],"of":[1,37,45,66,112,125,144],"biology-inspired":[2,94],"computer":[3],"science":[4],"is":[5,30,114],"based":[6,23,70,162],"on":[7,24,71,134,163],"the":[8,25,60,80,110,135,156],"Central":[9,81],"Dogma,":[10],"as":[11,49,59,83,141],"implemented":[12],"with":[13],"genetic":[14],"algorithms":[15],"or":[16,93],"evolutionary":[17],"computation.":[18],"That":[19],"60-year-old":[20],"biological":[21,46],"principle":[22],"genome,":[26],"transcriptome":[27],"and":[28,41,62,87,90,118,121,153],"proteasome":[29],"becoming":[31],"overshadowed":[32],"by":[33,116],"a":[34,55,72,84,100,119,142,145],"new":[35,56,64],"paradigm":[36],"complex":[38],"ordered":[39],"associations":[40],"connections":[42],"between":[43,91],"layers":[44],"entities,":[47],"such":[48],"interactomes,":[50],"metabolomics,":[51],"etc.":[52],"We":[53],"define":[54],"hierarchical":[57],"concept":[58],"\u201cConnectosome\u201d,":[61],"propose":[63],"venues":[65],"computational":[67],"data":[68],"structures":[69],"conceptual":[73],"framework":[74,109,150],"called":[75],"\u201cGrand":[76],"Ensemble\u201d":[77],"which":[78,99],"contains":[79],"Dogma":[82],"subset.":[85],"Connectedness":[86],"communication":[88],"within":[89],"living":[92],"systems":[95],"comprise":[96],"ensembles":[97],"from":[98],"physical":[101],"computing":[102],"system":[103],"can":[104],"be":[105],"conceived.":[106],"In":[107],"this":[108],"delivery":[111],"messages":[113],"filtered":[115],"size":[117],"simple":[120],"rapid":[122],"semantic":[123],"analysis":[124],"their":[126],"content.":[127],"This":[128,149],"work":[129],"aims":[130],"to":[131,155,168],"initiate":[132],"discussion":[133],"Grand":[136],"Ensemble":[137],"in":[138,173],"network":[139],"biology":[140],"representation":[143],"Persistent":[146],"Turing":[147],"Machine.":[148],"adding":[151],"interaction":[152],"persistency":[154],"classic":[157],"Turing-machine":[158],"model":[159],"uses":[160],"metrics":[161],"resilience":[164],"that":[165],"has":[166],"application":[167],"dynamic":[169],"optimization":[170],"problem":[171],"solving":[172],"Genetic":[174],"Programming.":[175]},"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2026-05-22T06:13:13.366637","created_date":"2025-10-10T00:00:00"}
