{"id":"https://openalex.org/W2538555370","doi":"https://doi.org/10.3390/computation4040039","title":"A Multi-Compartment Hybrid Computational Model Predicts Key Roles for Dendritic Cells in Tuberculosis Infection","display_name":"A Multi-Compartment Hybrid Computational Model Predicts Key Roles for Dendritic Cells in Tuberculosis Infection","publication_year":2016,"publication_date":"2016-10-21","ids":{"openalex":"https://openalex.org/W2538555370","doi":"https://doi.org/10.3390/computation4040039","mag":"2538555370","pmid":"https://pubmed.ncbi.nlm.nih.gov/28989808"},"language":"en","primary_location":{"id":"doi:10.3390/computation4040039","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computation4040039","pdf_url":"https://www.mdpi.com/2079-3197/4/4/39/pdf?version=1477047982","source":{"id":"https://openalex.org/S2738402919","display_name":"Computation","issn_l":"2079-3197","issn":["2079-3197"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2079-3197/4/4/39/pdf?version=1477047982","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012365542","display_name":"Simeone Marino","orcid":"https://orcid.org/0000-0002-0051-8198"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Simeone Marino","raw_affiliation_strings":["Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067786863","display_name":"Denise E. Kirschner","orcid":"https://orcid.org/0000-0002-1053-2591"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Denise Kirschner","raw_affiliation_strings":["Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA","institution_ids":["https://openalex.org/I27837315"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5067786863"],"corresponding_institution_ids":["https://openalex.org/I27837315"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":3.2169,"has_fulltext":true,"cited_by_count":44,"citation_normalized_percentile":{"value":0.91879562,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"4","issue":"4","first_page":"39","last_page":"39"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/compartment","display_name":"Compartment (ship)","score":0.7620310187339783},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.6568295955657959},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.5637994408607483},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.35992223024368286},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33489805459976196},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.315987229347229},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.10675504803657532},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.1020016074180603},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.06061527132987976}],"concepts":[{"id":"https://openalex.org/C203635412","wikidata":"https://www.wikidata.org/wiki/Q17007432","display_name":"Compartment (ship)","level":2,"score":0.7620310187339783},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.6568295955657959},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.5637994408607483},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.35992223024368286},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33489805459976196},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.315987229347229},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.10675504803657532},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.1020016074180603},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.06061527132987976},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.3390/computation4040039","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computation4040039","pdf_url":"https://www.mdpi.com/2079-3197/4/4/39/pdf?version=1477047982","source":{"id":"https://openalex.org/S2738402919","display_name":"Computation","issn_l":"2079-3197","issn":["2079-3197"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation","raw_type":"journal-article"},{"id":"pmid:28989808","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28989808","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation (Basel, Switzerland)","raw_type":null},{"id":"pmh:oai:osti.gov:1629904","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1629904","pdf_url":"https://www.osti.gov/servlets/purl/1629904","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:doaj.org/article:05f941cabc0640e09e41a1c4ded4b00b","is_oa":true,"landing_page_url":"https://doaj.org/article/05f941cabc0640e09e41a1c4ded4b00b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computation, Vol 4, Iss 4, p 39 (2016)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4551494","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5627612","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:mdpi.com:/2079-3197/4/4/39/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/computation4040039","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computation; Volume 4; Issue 4; Pages: 39","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/computation4040039","is_oa":true,"landing_page_url":"https://doi.org/10.3390/computation4040039","pdf_url":"https://www.mdpi.com/2079-3197/4/4/39/pdf?version=1477047982","source":{"id":"https://openalex.org/S2738402919","display_name":"Computation","issn_l":"2079-3197","issn":["2079-3197"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computation","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.41999998688697815,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1286236842","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1554045874","display_name":null,"funder_award_id":"ACI-1053575","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2294011902","display_name":null,"funder_award_id":"R01 HL110811","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G3083819904","display_name":null,"funder_award_id":"05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3513880500","display_name":null,"funder_award_id":"R01 AI123093-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3773639861","display_name":null,"funder_award_id":"R01 AI123093","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G4501827968","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G4565140552","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G498139845","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G5228687354","display_name":null,"funder_award_id":"R01 EB012579","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G577720359","display_name":null,"funder_award_id":"U01 HL131072","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G6348972864","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6558272803","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6778350887","display_name":"XSEDE: eXtreme Science and Engineering Discovery Environment","funder_award_id":"1053575","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7233692708","display_name":null,"funder_award_id":"DE-AC02-05CH11231","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7602310758","display_name":null,"funder_award_id":"R01 HL 110811","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8619041460","display_name":null,"funder_award_id":"R01 EB012579","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G969889393","display_name":null,"funder_award_id":"DE-AC02-","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2538555370.pdf"},"referenced_works_count":78,"referenced_works":["https://openalex.org/W131663615","https://openalex.org/W137682925","https://openalex.org/W579330158","https://openalex.org/W1483831487","https://openalex.org/W1489810600","https://openalex.org/W1661544713","https://openalex.org/W1799454977","https://openalex.org/W1802236039","https://openalex.org/W1921088252","https://openalex.org/W1962869168","https://openalex.org/W1963773088","https://openalex.org/W1963842765","https://openalex.org/W1967594644","https://openalex.org/W1969623044","https://openalex.org/W1988519891","https://openalex.org/W1989393824","https://openalex.org/W1990267308","https://openalex.org/W2003081219","https://openalex.org/W2003652884","https://openalex.org/W2005606162","https://openalex.org/W2006433225","https://openalex.org/W2006772343","https://openalex.org/W2010654103","https://openalex.org/W2017111622","https://openalex.org/W2025951355","https://openalex.org/W2035588631","https://openalex.org/W2035592397","https://openalex.org/W2036084890","https://openalex.org/W2036109191","https://openalex.org/W2038631586","https://openalex.org/W2046177867","https://openalex.org/W2050216284","https://openalex.org/W2054957138","https://openalex.org/W2057467743","https://openalex.org/W2066013154","https://openalex.org/W2067267791","https://openalex.org/W2068034671","https://openalex.org/W2071857026","https://openalex.org/W2081354886","https://openalex.org/W2081622536","https://openalex.org/W2082206279","https://openalex.org/W2082599426","https://openalex.org/W2085448630","https://openalex.org/W2089035904","https://openalex.org/W2092509730","https://openalex.org/W2096405961","https://openalex.org/W2099029060","https://openalex.org/W2100820895","https://openalex.org/W2103406125","https://openalex.org/W2105159335","https://openalex.org/W2110568039","https://openalex.org/W2111220263","https://openalex.org/W2111746777","https://openalex.org/W2112362733","https://openalex.org/W2117793307","https://openalex.org/W2130046741","https://openalex.org/W2130615964","https://openalex.org/W2133634368","https://openalex.org/W2135437388","https://openalex.org/W2138918240","https://openalex.org/W2140708650","https://openalex.org/W2140834671","https://openalex.org/W2141890333","https://openalex.org/W2147258880","https://openalex.org/W2148432422","https://openalex.org/W2152803686","https://openalex.org/W2153416012","https://openalex.org/W2160556418","https://openalex.org/W2161842856","https://openalex.org/W2164081168","https://openalex.org/W2170967684","https://openalex.org/W2312385578","https://openalex.org/W2328071665","https://openalex.org/W2338940156","https://openalex.org/W2414889063","https://openalex.org/W2434315415","https://openalex.org/W2478131347","https://openalex.org/W6605291557"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W4389568370","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W1506200166","https://openalex.org/W1489783725"],"abstract_inverted_index":{"Tuberculosis":[0],"(TB)":[1],"is":[2,34,168,290],"a":[3,111,171,204,225,239,301],"world-wide":[4],"health":[5],"problem":[6],"with":[7,13,195],"approximately":[8],"2":[9],"billion":[10],"people":[11],"infected":[12],"Mycobacterium":[14],"tuberculosis":[15,129,281],"(Mtb,":[16],"the":[17,35,63,72,185,212,215,232,253,325],"causative":[18],"bacterium":[19],"of":[20,25,37,49,74,154,156,184,208,234,257,261,271,287],"TB).":[21],"The":[22,245,259,284],"pathologic":[23],"hallmark":[24],"Mtb":[26,67,295],"infection":[27,75,130,191,296,322],"in":[28,41,119,188,224,238,267,280],"humans":[29],"and":[30,61,125,131,159,166,178,192,218,255,274,277,303,308,334],"Non-Human":[31],"Primates":[32],"(NHPs)":[33],"formation":[36,165],"spherical":[38],"structures,":[39],"primarily":[40],"lungs,":[42,52],"called":[43],"granulomas.":[44],"Infection":[45],"occurs":[46],"after":[47,294],"inhalation":[48],"bacteria":[50,60],"into":[51,242],"where":[53,82,145],"resident":[54],"antigen-presenting":[55],"cells":[56,86,236],"(APCs),":[57],"take":[58],"up":[59],"initiate":[62],"immune":[64,104,121],"response":[65,189],"to":[66,77,87,99,101,136,190,202,214,219,265,299],"infection.":[68,282],"APCs":[69],"traffic":[70],"from":[71,211,252],"site":[73,144,153],"(lung)":[76],"lung-draining":[78],"lymph":[79,150,216],"nodes":[80],"(LNs)":[81],"they":[83],"prime":[84],"T":[85,91,310],"recognize":[88],"Mtb.":[89],"These":[90],"cells,":[92],"circulating":[93],"back":[94,98],"through":[95],"blood,":[96],"migrate":[97],"lungs":[100,254],"perform":[102],"their":[103,278],"effector":[105],"functions.":[106],"We":[107],"have":[108,203],"previously":[109],"developed":[110],"hybrid":[112],"agent-based":[113],"model":[114,135,173,246],"(ABM,":[115],"labeled":[116],"GranSim)":[117],"describing":[118],"silico":[120],"cell,":[122],"bacterial":[123,328,332],"(Mtb)":[124],"molecular":[126],"behaviors":[127],"during":[128,321],"recently":[132],"linked":[133],"that":[134,291],"operate":[137],"across":[138],"three":[139],"physiological":[140],"compartments:":[141],"lung":[142,148,213],"(infection":[143],"granulomas":[146],"form),":[147],"draining":[149,226],"node":[151],"(LN,":[152],"generation":[155],"adaptive":[157],"immunity)":[158],"blood":[160,179,256],"(a":[161],"measurable":[162],"compartment).":[163],"Granuloma":[164],"function":[167],"captured":[169,194],"by":[170],"spatio-temporal":[172],"(i.e.,":[174],"ABM),":[175],"while":[176],"LN":[177],"compartments":[180],"represent":[181],"temporal":[182],"dynamics":[183],"whole":[186],"body":[187],"are":[193,297],"ordinary":[196],"differential":[197],"equations":[198],"(ODEs).":[199],"In":[200],"order":[201],"more":[205],"mechanistic":[206],"representation":[207],"APC":[209],"trafficking":[210,273],"node,":[217],"better":[220],"capture":[221],"antigen":[222,275],"presentation":[223,276],"LN,":[227],"this":[228,288],"current":[229],"study":[230,289],"incorporates":[231],"role":[233,279],"dendritic":[235],"(DCs)":[237],"computational":[240],"fashion":[241],"GranSim.":[243],"Results:":[244],"was":[247],"calibrated":[248],"using":[249],"experimental":[250],"data":[251],"NHPs.":[258],"addition":[260],"DCs":[262],"allowed":[263],"us":[264],"investigate":[266],"greater":[268],"detail":[269],"mechanisms":[270],"recruitment,":[272],"Conclusion:":[283],"main":[285],"conclusion":[286],"early":[292,319],"events":[293],"critical":[298],"establishing":[300],"timely":[302],"effective":[304],"response.":[305],"Manipulating":[306],"CD8+":[307],"CD4+":[309],"cell":[311],"proliferation":[312],"rates,":[313],"as":[314,316],"well":[315],"DC":[317],"migration":[318],"on":[320],"can":[323],"determine":[324],"difference":[326],"between":[327],"clearance":[329],"vs.":[330],"uncontrolled":[331],"growth":[333],"dissemination.":[335]},"counts_by_year":[{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":4}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
