{"id":"https://openalex.org/W2036140802","doi":"https://doi.org/10.3390/a2031155","title":"Algorithm for the Analysis of Tryptophan Fluorescence Spectra and Their Correlation with Protein Structural Parameters","display_name":"Algorithm for the Analysis of Tryptophan Fluorescence Spectra and Their Correlation with Protein Structural Parameters","publication_year":2009,"publication_date":"2009-09-16","ids":{"openalex":"https://openalex.org/W2036140802","doi":"https://doi.org/10.3390/a2031155","mag":"2036140802"},"language":"en","primary_location":{"id":"doi:10.3390/a2031155","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a2031155","pdf_url":"https://www.mdpi.com/1999-4893/2/3/1155/pdf?version=1253100877","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/2/3/1155/pdf?version=1253100877","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008721739","display_name":"John Hixon","orcid":null},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"John Hixon","raw_affiliation_strings":["Physics Department, University of Rhode Island, 2 Lippitt Rd, Kingston, RI 02881, USA"],"affiliations":[{"raw_affiliation_string":"Physics Department, University of Rhode Island, 2 Lippitt Rd, Kingston, RI 02881, USA","institution_ids":["https://openalex.org/I17626003"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029396684","display_name":"Yana K. Reshetnyak","orcid":null},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yana  K. Reshetnyak","raw_affiliation_strings":["Physics Department, University of Rhode Island, 2 Lippitt Rd, Kingston, RI 02881, USA"],"affiliations":[{"raw_affiliation_string":"Physics Department, University of Rhode Island, 2 Lippitt Rd, Kingston, RI 02881, USA","institution_ids":["https://openalex.org/I17626003"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5008721739"],"corresponding_institution_ids":["https://openalex.org/I17626003"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.0,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.11644845,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2","issue":"3","first_page":"1155","last_page":"1176"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tryptophan","display_name":"Tryptophan","score":0.8764463663101196},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.7390897274017334},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4857514500617981},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.43161648511886597},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.16855359077453613},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.14504215121269226},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.11637833714485168},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.08587312698364258}],"concepts":[{"id":"https://openalex.org/C2776706248","wikidata":"https://www.wikidata.org/wiki/Q181003","display_name":"Tryptophan","level":3,"score":0.8764463663101196},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.7390897274017334},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4857514500617981},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.43161648511886597},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.16855359077453613},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.14504215121269226},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.11637833714485168},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.08587312698364258}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/a2031155","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a2031155","pdf_url":"https://www.mdpi.com/1999-4893/2/3/1155/pdf?version=1253100877","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:digitalcommons.uri.edu:phys_facpubs-1000","is_oa":true,"landing_page_url":"https://digitalcommons.uri.edu/phys_facpubs/2","pdf_url":"https://digitalcommons.uri.edu/phys_facpubs/2","source":{"id":"https://openalex.org/S4377196359","display_name":"Digital Commons - URI (University of Rhode Island)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I17626003","host_organization_name":"University of Rhode Island","host_organization_lineage":["https://openalex.org/I17626003"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Physics Faculty Publications","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:3e7c5492db2e4095b01c0bcdcd40be4a","is_oa":true,"landing_page_url":"https://doaj.org/article/3e7c5492db2e4095b01c0bcdcd40be4a","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 2, Iss 3, Pp 1155-1176 (2009)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1999-4893/2/3/1155/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/a2031155","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms; Volume 2; Issue 3; Pages: 1155-1176","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/a2031155","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a2031155","pdf_url":"https://www.mdpi.com/1999-4893/2/3/1155/pdf?version=1253100877","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2036140802.pdf","grobid_xml":"https://content.openalex.org/works/W2036140802.grobid-xml"},"referenced_works_count":88,"referenced_works":["https://openalex.org/W235336989","https://openalex.org/W335769971","https://openalex.org/W595624220","https://openalex.org/W634625923","https://openalex.org/W650972495","https://openalex.org/W876200163","https://openalex.org/W1504541969","https://openalex.org/W1518379018","https://openalex.org/W1554361839","https://openalex.org/W1584817845","https://openalex.org/W1589070426","https://openalex.org/W1597770847","https://openalex.org/W1638291624","https://openalex.org/W1706331703","https://openalex.org/W1709634703","https://openalex.org/W1816966864","https://openalex.org/W1966359514","https://openalex.org/W1966572154","https://openalex.org/W1971892899","https://openalex.org/W1978283159","https://openalex.org/W1978995813","https://openalex.org/W1985764073","https://openalex.org/W1990685972","https://openalex.org/W1992309404","https://openalex.org/W1992355680","https://openalex.org/W1992983410","https://openalex.org/W1995725157","https://openalex.org/W1997331263","https://openalex.org/W1997503429","https://openalex.org/W1998030710","https://openalex.org/W1998552374","https://openalex.org/W2000521482","https://openalex.org/W2000952569","https://openalex.org/W2001639281","https://openalex.org/W2003239482","https://openalex.org/W2008214535","https://openalex.org/W2012185830","https://openalex.org/W2012898121","https://openalex.org/W2013164018","https://openalex.org/W2016700779","https://openalex.org/W2016858593","https://openalex.org/W2019558953","https://openalex.org/W2020457591","https://openalex.org/W2021303886","https://openalex.org/W2032762225","https://openalex.org/W2037952480","https://openalex.org/W2040874305","https://openalex.org/W2046747392","https://openalex.org/W2051268886","https://openalex.org/W2051628563","https://openalex.org/W2054668663","https://openalex.org/W2060726297","https://openalex.org/W2062243225","https://openalex.org/W2070792168","https://openalex.org/W2072451351","https://openalex.org/W2073835183","https://openalex.org/W2078040293","https://openalex.org/W2079800679","https://openalex.org/W2080970333","https://openalex.org/W2083542685","https://openalex.org/W2088419282","https://openalex.org/W2090576303","https://openalex.org/W2092920038","https://openalex.org/W2093827702","https://openalex.org/W2094799074","https://openalex.org/W2096423704","https://openalex.org/W2102211745","https://openalex.org/W2104123653","https://openalex.org/W2109073452","https://openalex.org/W2114066594","https://openalex.org/W2115280233","https://openalex.org/W2123887997","https://openalex.org/W2129820085","https://openalex.org/W2129995310","https://openalex.org/W2130676145","https://openalex.org/W2138644385","https://openalex.org/W2138875941","https://openalex.org/W2140918764","https://openalex.org/W2150017038","https://openalex.org/W2160813283","https://openalex.org/W2167591333","https://openalex.org/W2398987816","https://openalex.org/W2414885304","https://openalex.org/W2491458126","https://openalex.org/W3046265042","https://openalex.org/W3164637517","https://openalex.org/W4299496276","https://openalex.org/W4323285278"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W2948807893","https://openalex.org/W2778153218","https://openalex.org/W2748952813","https://openalex.org/W1531601525","https://openalex.org/W2078814861","https://openalex.org/W2527526854","https://openalex.org/W2062208111","https://openalex.org/W1976181487","https://openalex.org/W1986764834"],"abstract_inverted_index":{"The":[0],"fluorescence":[1,16,54],"properties":[2],"of":[3,11,30,44,50,58],"tryptophan":[4,53],"residues":[5],"are":[6,18],"sensitive":[7],"to":[8,21],"the":[9,28,31,48],"microenvironment":[10],"fluorophores":[12],"in":[13,25],"proteins.":[14,26],"Therefore,":[15],"characteristics":[17],"widely":[19],"used":[20],"study":[22],"structural":[23,32,64],"transitions":[24],"However,":[27],"decoding":[29],"information":[33],"from":[34],"spectroscopic":[35],"data":[36],"is":[37],"challenging.":[38],"Here":[39],"we":[40],"present":[41],"a":[42],"review":[43],"approaches":[45],"developed":[46],"for":[47],"decomposition":[49],"multi-component":[51],"protein":[52,63],"spectra":[55],"and":[56],"correlation":[57],"these":[59],"spectral":[60],"parameters":[61],"with":[62],"properties.":[65]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
