{"id":"https://openalex.org/W4224919672","doi":"https://doi.org/10.3390/a15020049","title":"Using Explainable Machine Learning to Explore the Impact of Synoptic Reporting on Prostate Cancer","display_name":"Using Explainable Machine Learning to Explore the Impact of Synoptic Reporting on Prostate Cancer","publication_year":2022,"publication_date":"2022-01-29","ids":{"openalex":"https://openalex.org/W4224919672","doi":"https://doi.org/10.3390/a15020049"},"language":"en","primary_location":{"id":"doi:10.3390/a15020049","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a15020049","pdf_url":"https://www.mdpi.com/1999-4893/15/2/49/pdf?version=1644469650","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/15/2/49/pdf?version=1644469650","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029827165","display_name":"Femke M. Janssen","orcid":"https://orcid.org/0000-0001-7643-8381"},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Femke M. Janssen","raw_affiliation_strings":["The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands"],"affiliations":[{"raw_affiliation_string":"The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands","institution_ids":["https://openalex.org/I4210142067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005366030","display_name":"Katja K.H. Aben","orcid":"https://orcid.org/0000-0002-0214-2147"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Katja K. H. Aben","raw_affiliation_strings":["Radboud Institute for Health Sciences, 6525 EZ Nijmegen, The Netherlands","The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Radboud Institute for Health Sciences, 6525 EZ Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands","institution_ids":["https://openalex.org/I4210142067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024326405","display_name":"Berdine L. Heesterman","orcid":"https://orcid.org/0000-0003-2428-4258"},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Berdine L. Heesterman","raw_affiliation_strings":["The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands"],"affiliations":[{"raw_affiliation_string":"The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands","institution_ids":["https://openalex.org/I4210142067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018863305","display_name":"Quirinus J.M. Voorham","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Quirinus J. M. Voorham","raw_affiliation_strings":["Nationwide Network and Registry of Histo- and Cytopathology in The Netherlands (PALGA), 1066 CX Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Nationwide Network and Registry of Histo- and Cytopathology in The Netherlands (PALGA), 1066 CX Amsterdam, The Netherlands","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019688208","display_name":"Paul A. Seegers","orcid":"https://orcid.org/0000-0002-7617-415X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paul A. Seegers","raw_affiliation_strings":["Nationwide Network and Registry of Histo- and Cytopathology in The Netherlands (PALGA), 1066 CX Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Nationwide Network and Registry of Histo- and Cytopathology in The Netherlands (PALGA), 1066 CX Amsterdam, The Netherlands","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047871054","display_name":"Arturo Moncada\u2010Torres","orcid":"https://orcid.org/0000-0001-7233-2117"},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Arturo Moncada-Torres","raw_affiliation_strings":["The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands"],"affiliations":[{"raw_affiliation_string":"The Netherlands Comprehensive Cancer Organization (IKNL), 5612 HZ Eindhoven, The Netherlands","institution_ids":["https://openalex.org/I4210142067"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5047871054"],"corresponding_institution_ids":["https://openalex.org/I4210142067"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":1.4583,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.84352729,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"15","issue":"2","first_page":"49","last_page":"49"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12026","display_name":"Explainable Artificial Intelligence (XAI)","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12026","display_name":"Explainable Artificial Intelligence (XAI)","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9879000186920166,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"Prostate cancer","score":0.638349711894989},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5968361496925354},{"id":"https://openalex.org/keywords/boosting","display_name":"Boosting (machine learning)","score":0.5757597088813782},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5182973742485046},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5167517066001892},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.5107085704803467},{"id":"https://openalex.org/keywords/proportional-hazards-model","display_name":"Proportional hazards model","score":0.5078347325325012},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4992103576660156},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.36692219972610474},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.34365057945251465},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.1550825834274292}],"concepts":[{"id":"https://openalex.org/C2780192828","wikidata":"https://www.wikidata.org/wiki/Q181257","display_name":"Prostate cancer","level":3,"score":0.638349711894989},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5968361496925354},{"id":"https://openalex.org/C46686674","wikidata":"https://www.wikidata.org/wiki/Q466303","display_name":"Boosting (machine learning)","level":2,"score":0.5757597088813782},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5182973742485046},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5167517066001892},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.5107085704803467},{"id":"https://openalex.org/C50382708","wikidata":"https://www.wikidata.org/wiki/Q223218","display_name":"Proportional hazards model","level":2,"score":0.5078347325325012},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4992103576660156},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.36692219972610474},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.34365057945251465},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1550825834274292},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3390/a15020049","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a15020049","pdf_url":"https://www.mdpi.com/1999-4893/15/2/49/pdf?version=1644469650","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:c2ba8cd712084cd783321849967bcf8b","is_oa":true,"landing_page_url":"https://doaj.org/article/c2ba8cd712084cd783321849967bcf8b","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 15, Iss 2, p 49 (2022)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1999-4893/15/2/49/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/a15020049","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms; Volume 15; Issue 2; Pages: 49","raw_type":"Text"},{"id":"pmh:oai:repository.ubn.ru.nl:2066/247780","is_oa":false,"landing_page_url":"https://repository.ubn.ru.nl/handle/2066/247780","pdf_url":null,"source":{"id":"https://openalex.org/S4306401067","display_name":"Radboud Repository (Radboud University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145872427","host_organization_name":"Radboud University Nijmegen","host_organization_lineage":["https://openalex.org/I145872427"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, 15, 2","raw_type":"Article / Letter to editor"},{"id":"pmh:ru:oai:repository.ubn.ru.nl:2066/247780","is_oa":true,"landing_page_url":"http://hdl.handle.net/2066/247780","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, 15","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.3390/a15020049","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a15020049","pdf_url":"https://www.mdpi.com/1999-4893/15/2/49/pdf?version=1644469650","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4224919672.pdf","grobid_xml":"https://content.openalex.org/works/W4224919672.grobid-xml"},"referenced_works_count":70,"referenced_works":["https://openalex.org/W136927043","https://openalex.org/W1257569579","https://openalex.org/W1696053030","https://openalex.org/W2013827712","https://openalex.org/W2052825782","https://openalex.org/W2054502441","https://openalex.org/W2084139018","https://openalex.org/W2102636708","https://openalex.org/W2111547563","https://openalex.org/W2126726405","https://openalex.org/W2129296674","https://openalex.org/W2129925362","https://openalex.org/W2282821441","https://openalex.org/W2295598076","https://openalex.org/W2308119814","https://openalex.org/W2314394569","https://openalex.org/W2320916179","https://openalex.org/W2498119267","https://openalex.org/W2556851635","https://openalex.org/W2561981131","https://openalex.org/W2753919178","https://openalex.org/W2771253639","https://openalex.org/W2792075315","https://openalex.org/W2888487581","https://openalex.org/W2891503716","https://openalex.org/W2892741787","https://openalex.org/W2897620540","https://openalex.org/W2943162041","https://openalex.org/W2943491685","https://openalex.org/W2944072352","https://openalex.org/W2944218525","https://openalex.org/W2947910247","https://openalex.org/W2962772482","https://openalex.org/W2962862931","https://openalex.org/W2963095307","https://openalex.org/W2963232127","https://openalex.org/W2965512201","https://openalex.org/W2969790209","https://openalex.org/W2981380606","https://openalex.org/W2992144222","https://openalex.org/W3013582289","https://openalex.org/W3014447915","https://openalex.org/W3024173558","https://openalex.org/W3035517615","https://openalex.org/W3036196393","https://openalex.org/W3043083589","https://openalex.org/W3043310174","https://openalex.org/W3090317061","https://openalex.org/W3097349486","https://openalex.org/W3114548442","https://openalex.org/W3116286104","https://openalex.org/W3128180004","https://openalex.org/W3136075083","https://openalex.org/W3158495435","https://openalex.org/W3166194073","https://openalex.org/W3167561799","https://openalex.org/W3209863938","https://openalex.org/W4230892783","https://openalex.org/W4235535878","https://openalex.org/W4242314730","https://openalex.org/W4249522930","https://openalex.org/W4388320148","https://openalex.org/W6605558994","https://openalex.org/W6722226382","https://openalex.org/W6732245160","https://openalex.org/W6737947904","https://openalex.org/W6748883668","https://openalex.org/W6771659168","https://openalex.org/W6780055081","https://openalex.org/W7018248530"],"related_works":["https://openalex.org/W2125652721","https://openalex.org/W1540371141","https://openalex.org/W4231274751","https://openalex.org/W1549363203","https://openalex.org/W2154063878","https://openalex.org/W2556012038","https://openalex.org/W1489772951","https://openalex.org/W1538046993","https://openalex.org/W3082059448","https://openalex.org/W4313640622"],"abstract_inverted_index":{"Machine":[0],"learning":[1,44],"(ML)":[2],"models":[3,192],"have":[4],"proven":[5],"to":[6,11,132,144,189,204,216],"be":[7],"an":[8,95,186],"attractive":[9],"alternative":[10],"traditional":[12],"statistical":[13],"methods":[14,219],"in":[15,66,101,151,221,225,228],"oncology.":[16],"However,":[17],"they":[18],"are":[19,60],"often":[20],"regarded":[21],"as":[22,62],"black":[23,196],"boxes,":[24],"hindering":[25],"their":[26,195],"adoption":[27],"for":[28],"answering":[29],"real-life":[30],"clinical":[31],"questions.":[32],"In":[33],"this":[34],"paper,":[35],"we":[36,47,125],"show":[37],"a":[38,73,86,134,176],"practical":[39],"application":[40],"of":[41,72,75,85,94,138,142,165],"explainable":[42],"machine":[43],"(XML).":[45],"Specifically,":[46],"explored":[48],"the":[49,70,83,109,119,145,163,166,207,217],"effect":[50],"that":[51,93,108,173],"synoptic":[52],"reporting":[53],"(SR;":[54],"i.e.,":[55],"reports":[56],"where":[57],"data":[58,64],"elements":[59],"presented":[61],"discrete":[63],"items)":[65],"Pathology":[67],"has":[68,175],"on":[69,180],"survival":[71],"population":[74],"14,878":[76],"Dutch":[77],"prostate":[78],"cancer":[79],"patients.":[80],"We":[81,106],"compared":[82],"performance":[84],"Cox":[87],"Proportional":[88],"Hazards":[89],"model":[90,99,111,150],"(CPH)":[91],"against":[92],"eXtreme":[96],"Gradient":[97],"Boosting":[98],"(XGB)":[100],"predicting":[102],"patient":[103,182],"ranked":[104],"survival.":[105,183],"found":[107],"XGB":[110,149],"(c-index":[112,121],"=":[113,122],"0.67)":[114],"performed":[115],"significantly":[116],"better":[117],"than":[118],"CPH":[120],"0.58).":[123],"Moreover,":[124,184],"used":[126,220],"Shapley":[127],"Additive":[128],"Explanations":[129],"(SHAP)":[130],"values":[131],"generate":[133],"quantitative":[135],"mathematical":[136],"representation":[137],"how":[139],"features\u2014including":[140],"usage":[141],"SR\u2014contributed":[143],"models\u2019":[146],"output.":[147],"The":[148],"combination":[152],"with":[153],"SHAP":[154],"visualizations":[155],"revealed":[156],"interesting":[157],"interaction":[158],"effects":[159],"between":[160],"SR":[161,174],"and":[162,202,224],"rest":[164],"most":[167],"important":[168],"features.":[169],"These":[170],"results":[171],"hint":[172],"moderate":[177],"positive":[178],"impact":[179],"predicted":[181],"adding":[185],"explainability":[187],"layer":[188],"predictive":[190],"ML":[191],"can":[193,210],"open":[194],"box,":[197],"making":[198],"them":[199],"more":[200],"accessible":[201],"easier":[203],"understand":[205],"by":[206],"user.":[208],"This":[209],"make":[211],"XML-based":[212],"techniques":[213],"appealing":[214],"alternatives":[215],"classical":[218],"oncological":[222],"research":[223],"health":[226],"care":[227],"general.":[229]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2022-04-28T00:00:00"}
