{"id":"https://openalex.org/W3143169476","doi":"https://doi.org/10.3390/a14040107","title":"Identification of Intrinsically Disordered Protein Regions Based on Deep Neural Network-VGG16","display_name":"Identification of Intrinsically Disordered Protein Regions Based on Deep Neural Network-VGG16","publication_year":2021,"publication_date":"2021-03-28","ids":{"openalex":"https://openalex.org/W3143169476","doi":"https://doi.org/10.3390/a14040107","mag":"3143169476"},"language":"en","primary_location":{"id":"doi:10.3390/a14040107","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a14040107","pdf_url":"https://www.mdpi.com/1999-4893/14/4/107/pdf?version=1617937560","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/14/4/107/pdf?version=1617937560","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020215050","display_name":"Pengchang Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pengchang Xu","raw_affiliation_strings":["College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300350, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300350, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073649829","display_name":"Jiaxiang Zhao","orcid":"https://orcid.org/0000-0002-2287-0811"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiaxiang Zhao","raw_affiliation_strings":["College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300350, China"],"raw_orcid":"https://orcid.org/0000-0002-2287-0811","affiliations":[{"raw_affiliation_string":"College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300350, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100436868","display_name":"Jie Zhang","orcid":"https://orcid.org/0000-0003-2493-5209"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Zhang","raw_affiliation_strings":["College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300350, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300350, China","institution_ids":["https://openalex.org/I205237279"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5073649829"],"corresponding_institution_ids":["https://openalex.org/I205237279"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.9769,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.74025651,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"14","issue":"4","first_page":"107","last_page":"107"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.8021751642227173},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6456788778305054},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5791835188865662},{"id":"https://openalex.org/keywords/test-set","display_name":"Test set","score":0.5583345293998718},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5526703000068665},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5179354548454285},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.4507352411746979},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.44094550609588623},{"id":"https://openalex.org/keywords/deep-neural-networks","display_name":"Deep neural networks","score":0.4197501540184021},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4012870192527771},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15308168530464172}],"concepts":[{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.8021751642227173},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6456788778305054},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5791835188865662},{"id":"https://openalex.org/C169903167","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Test set","level":2,"score":0.5583345293998718},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5526703000068665},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5179354548454285},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.4507352411746979},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.44094550609588623},{"id":"https://openalex.org/C2984842247","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep neural networks","level":3,"score":0.4197501540184021},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4012870192527771},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15308168530464172},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/a14040107","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a14040107","pdf_url":"https://www.mdpi.com/1999-4893/14/4/107/pdf?version=1617937560","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:2ad06abdbbf8477c8b4faf321b24b360","is_oa":true,"landing_page_url":"https://doaj.org/article/2ad06abdbbf8477c8b4faf321b24b360","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 14, Iss 4, p 107 (2021)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1999-4893/14/4/107/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/a14040107","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms; Volume 14; Issue 4; Pages: 107","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/a14040107","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a14040107","pdf_url":"https://www.mdpi.com/1999-4893/14/4/107/pdf?version=1617937560","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3143169476.pdf","grobid_xml":"https://content.openalex.org/works/W3143169476.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1686810756","https://openalex.org/W1981194976","https://openalex.org/W1989235034","https://openalex.org/W2008693552","https://openalex.org/W2015115860","https://openalex.org/W2021093679","https://openalex.org/W2021731848","https://openalex.org/W2036114259","https://openalex.org/W2052894646","https://openalex.org/W2055193239","https://openalex.org/W2071038701","https://openalex.org/W2095705004","https://openalex.org/W2102845147","https://openalex.org/W2117640066","https://openalex.org/W2140481505","https://openalex.org/W2147209844","https://openalex.org/W2154501851","https://openalex.org/W2156407548","https://openalex.org/W2156465034","https://openalex.org/W2156678798","https://openalex.org/W2162980545","https://openalex.org/W2169802764","https://openalex.org/W2322304557","https://openalex.org/W2562860543","https://openalex.org/W2566370974","https://openalex.org/W2605516844","https://openalex.org/W2606042658","https://openalex.org/W2621526417","https://openalex.org/W2762448613","https://openalex.org/W2783632698","https://openalex.org/W2937012383","https://openalex.org/W2948524511","https://openalex.org/W2987184424","https://openalex.org/W3007616265","https://openalex.org/W3011698511","https://openalex.org/W3043901899","https://openalex.org/W3086765999","https://openalex.org/W6674330103","https://openalex.org/W6770686123"],"related_works":["https://openalex.org/W4377865163","https://openalex.org/W3099765033","https://openalex.org/W3193857078","https://openalex.org/W2888956734","https://openalex.org/W3000197790","https://openalex.org/W4315865067","https://openalex.org/W2997155179","https://openalex.org/W2979433843","https://openalex.org/W3208304128","https://openalex.org/W4387327236"],"abstract_inverted_index":{"The":[0,94],"accurate":[1],"of":[2,11,91,97,126,130,140],"i":[3],"identificationntrinsically":[4],"disordered":[5],"proteins":[6,54],"or":[7],"protein":[8],"regions":[9],"is":[10,38,48,64,75,103],"great":[12],"importance,":[13],"as":[14],"they":[15],"are":[16],"involved":[17],"in":[18],"critical":[19],"biological":[20],"process":[21],"and":[22,59,84,117],"related":[23],"to":[24,86],"various":[25],"human":[26],"diseases.":[27],"In":[28],"this":[29],"paper,":[30],"we":[31],"develop":[32],"a":[33],"deep":[34,45,100,133],"neural":[35,46,62,73,101,134],"network":[36,47,63,74,102,135],"that":[37],"based":[39],"on":[40,66,78,105,111,119],"the":[41,56,60,67,79,89,106,112,120,137],"well-known":[42],"VGG16.":[43],"Our":[44,71],"then":[49],"trained":[50,61,72,99,132],"through":[51],"using":[52],"1450":[53],"from":[55],"dataset":[57],"DIS1616":[58],"tested":[65,77],"remaining":[68],"166":[69],"proteins.":[70],"also":[76],"blind":[80,113,121],"test":[81,107,114,122],"set":[82,108,115,123],"R80":[83,116],"MXD494":[85],"further":[87],"demonstrate":[88],"performance":[90],"our":[92,98,131],"model.":[93],"MCC":[95,128],"value":[96],"0.5132":[104],"DIS166,":[109],"0.5270":[110],"0.4577":[118],"MXD494.":[124],"All":[125],"these":[127],"values":[129,139],"exceed":[136],"corresponding":[138],"existing":[141],"prediction":[142],"methods.":[143]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
