{"id":"https://openalex.org/W3100774262","doi":"https://doi.org/10.3390/a14010014","title":"Subpath Queries on Compressed Graphs: A Survey","display_name":"Subpath Queries on Compressed Graphs: A Survey","publication_year":2021,"publication_date":"2021-01-05","ids":{"openalex":"https://openalex.org/W3100774262","doi":"https://doi.org/10.3390/a14010014","mag":"3100774262"},"language":"en","primary_location":{"id":"doi:10.3390/a14010014","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a14010014","pdf_url":"https://www.mdpi.com/1999-4893/14/1/14/pdf","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/14/1/14/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007324430","display_name":"Nicola Prezza","orcid":"https://orcid.org/0000-0003-3553-4953"},"institutions":[{"id":"https://openalex.org/I149461666","display_name":"Ca' Foscari University of Venice","ror":"https://ror.org/04yzxz566","country_code":"IT","type":"education","lineage":["https://openalex.org/I149461666"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Nicola Prezza","raw_affiliation_strings":["Department of Environmental Sciences, Informatics and Statistics, Ca\u2019 Foscari University, Dorsoduro, 3246, 30123 Venice, Italy","Ca' Foscari University of Venice"],"affiliations":[{"raw_affiliation_string":"Department of Environmental Sciences, Informatics and Statistics, Ca\u2019 Foscari University, Dorsoduro, 3246, 30123 Venice, Italy","institution_ids":["https://openalex.org/I149461666"]},{"raw_affiliation_string":"Ca' Foscari University of Venice","institution_ids":["https://openalex.org/I149461666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5007324430"],"corresponding_institution_ids":["https://openalex.org/I149461666"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00932637,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"14","issue":"1","first_page":"14","last_page":"14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12326","display_name":"Network Packet Processing and Optimization","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/suffix-tree","display_name":"Suffix tree","score":0.6886008977890015},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.68390291929245},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6714659333229065},{"id":"https://openalex.org/keywords/regular-expression","display_name":"Regular expression","score":0.6460479497909546},{"id":"https://openalex.org/keywords/suffix","display_name":"Suffix","score":0.6130030751228333},{"id":"https://openalex.org/keywords/compressed-suffix-array","display_name":"Compressed suffix array","score":0.5762304067611694},{"id":"https://openalex.org/keywords/pattern-matching","display_name":"Pattern matching","score":0.5029582381248474},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4590652287006378},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.4335760176181793},{"id":"https://openalex.org/keywords/string-searching-algorithm","display_name":"String searching algorithm","score":0.43006086349487305},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.34648624062538147},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.31126758456230164},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2736852765083313},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21705862879753113}],"concepts":[{"id":"https://openalex.org/C2781166958","wikidata":"https://www.wikidata.org/wiki/Q1426863","display_name":"Suffix tree","level":3,"score":0.6886008977890015},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.68390291929245},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6714659333229065},{"id":"https://openalex.org/C121329065","wikidata":"https://www.wikidata.org/wiki/Q185612","display_name":"Regular expression","level":2,"score":0.6460479497909546},{"id":"https://openalex.org/C2779804580","wikidata":"https://www.wikidata.org/wiki/Q102047","display_name":"Suffix","level":2,"score":0.6130030751228333},{"id":"https://openalex.org/C100903775","wikidata":"https://www.wikidata.org/wiki/Q5157028","display_name":"Compressed suffix array","level":4,"score":0.5762304067611694},{"id":"https://openalex.org/C68859911","wikidata":"https://www.wikidata.org/wiki/Q1503724","display_name":"Pattern matching","level":2,"score":0.5029582381248474},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4590652287006378},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.4335760176181793},{"id":"https://openalex.org/C7757238","wikidata":"https://www.wikidata.org/wiki/Q374040","display_name":"String searching algorithm","level":3,"score":0.43006086349487305},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.34648624062538147},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.31126758456230164},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2736852765083313},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21705862879753113},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.3390/a14010014","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a14010014","pdf_url":"https://www.mdpi.com/1999-4893/14/1/14/pdf","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:2011.10008","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2011.10008","pdf_url":"https://arxiv.org/pdf/2011.10008","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:3100774262","is_oa":true,"landing_page_url":"http://export.arxiv.org/pdf/2011.10008","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"pmh:oai:doaj.org/article:753c296dfa8542c0a09d35e11e787dfa","is_oa":true,"landing_page_url":"https://doaj.org/article/753c296dfa8542c0a09d35e11e787dfa","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 14, Iss 1, p 14 (2021)","raw_type":"article"},{"id":"pmh:oai:iris.unive.it:10278/3734911","is_oa":true,"landing_page_url":"http://hdl.handle.net/10278/3734911","pdf_url":null,"source":{"id":"https://openalex.org/S4306402336","display_name":"ARCA (Universit\u00e0 Ca' Foscari Venezia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149461666","host_organization_name":"Ca' Foscari University of Venice","host_organization_lineage":["https://openalex.org/I149461666"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:mdpi.com:/1999-4893/14/1/14/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/a14010014","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms; Volume 14; Issue 1; Pages: 14","raw_type":"Text"},{"id":"doi:10.48550/arxiv.2011.10008","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2011.10008","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.3390/a14010014","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a14010014","pdf_url":"https://www.mdpi.com/1999-4893/14/1/14/pdf","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.6000000238418579,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3100774262.pdf","grobid_xml":"https://content.openalex.org/works/W3100774262.grobid-xml"},"referenced_works_count":100,"referenced_works":["https://openalex.org/W589764772","https://openalex.org/W1201605537","https://openalex.org/W1485941238","https://openalex.org/W1520575986","https://openalex.org/W1567561846","https://openalex.org/W1573714593","https://openalex.org/W1577336816","https://openalex.org/W1584587517","https://openalex.org/W1967156765","https://openalex.org/W1969173824","https://openalex.org/W1972418517","https://openalex.org/W1973272384","https://openalex.org/W1973883768","https://openalex.org/W1985108724","https://openalex.org/W1985174631","https://openalex.org/W1985572324","https://openalex.org/W1987760161","https://openalex.org/W2006435065","https://openalex.org/W2011210839","https://openalex.org/W2017333496","https://openalex.org/W2018866650","https://openalex.org/W2030059888","https://openalex.org/W2038647778","https://openalex.org/W2054801208","https://openalex.org/W2054895735","https://openalex.org/W2056707490","https://openalex.org/W2057223122","https://openalex.org/W2084732238","https://openalex.org/W2088386938","https://openalex.org/W2088432971","https://openalex.org/W2101881908","https://openalex.org/W2102660041","https://openalex.org/W2103441770","https://openalex.org/W2118486794","https://openalex.org/W2124985265","https://openalex.org/W2134696992","https://openalex.org/W2147477044","https://openalex.org/W2154965336","https://openalex.org/W2158322625","https://openalex.org/W2161488606","https://openalex.org/W2164107415","https://openalex.org/W2169603381","https://openalex.org/W2173248617","https://openalex.org/W2344013120","https://openalex.org/W2406547600","https://openalex.org/W2496794807","https://openalex.org/W2517241835","https://openalex.org/W2528068670","https://openalex.org/W2533248932","https://openalex.org/W2547528004","https://openalex.org/W2725379159","https://openalex.org/W2765521106","https://openalex.org/W2790578235","https://openalex.org/W2794898040","https://openalex.org/W2795367446","https://openalex.org/W2799176187","https://openalex.org/W2805674303","https://openalex.org/W2884051041","https://openalex.org/W2889833303","https://openalex.org/W2912383825","https://openalex.org/W2914442620","https://openalex.org/W2952830951","https://openalex.org/W2960871920","https://openalex.org/W2962921833","https://openalex.org/W2963315614","https://openalex.org/W2963401517","https://openalex.org/W2963856156","https://openalex.org/W2964091527","https://openalex.org/W2966735921","https://openalex.org/W2975716916","https://openalex.org/W2987325813","https://openalex.org/W2999295646","https://openalex.org/W3000377615","https://openalex.org/W3002181530","https://openalex.org/W3003999948","https://openalex.org/W3010580865","https://openalex.org/W3013848899","https://openalex.org/W3038444735","https://openalex.org/W3081483715","https://openalex.org/W3091639865","https://openalex.org/W3100935868","https://openalex.org/W3114237669","https://openalex.org/W3114260090","https://openalex.org/W3115004854","https://openalex.org/W3116542221","https://openalex.org/W3126170517","https://openalex.org/W3127125728","https://openalex.org/W3142952149","https://openalex.org/W4205775169","https://openalex.org/W4247794781","https://openalex.org/W4285723210","https://openalex.org/W4301315466","https://openalex.org/W6621160150","https://openalex.org/W6633618826","https://openalex.org/W6634457518","https://openalex.org/W6679642144","https://openalex.org/W6683001672","https://openalex.org/W6732128899","https://openalex.org/W6762546422","https://openalex.org/W6766906220"],"related_works":["https://openalex.org/W2794898040","https://openalex.org/W2216956441","https://openalex.org/W2953368724","https://openalex.org/W3138303350","https://openalex.org/W1486245824","https://openalex.org/W69757616","https://openalex.org/W3213706389","https://openalex.org/W2058985355","https://openalex.org/W1480681399","https://openalex.org/W2074229180","https://openalex.org/W3093408116","https://openalex.org/W2765521106","https://openalex.org/W2993191809","https://openalex.org/W2911685815","https://openalex.org/W2303147829","https://openalex.org/W1492959626","https://openalex.org/W2030756600","https://openalex.org/W1523949762","https://openalex.org/W2401518565","https://openalex.org/W173675393"],"abstract_inverted_index":{"Text":[0],"indexing":[1,180],"is":[2,206],"a":[3,16,98,104,164,173,207],"classical":[4],"algorithmic":[5],"problem":[6,140],"that":[7,88,218],"has":[8],"been":[9],"studied":[10],"for":[11,228],"over":[12],"four":[13],"decades:":[14],"given":[15],"text":[17,75],"T,":[18],"pre-process":[19],"it":[20],"off-line":[21],"so":[22],"that,":[23],"later,":[24],"we":[25],"can":[26,91,147,160],"quickly":[27],"count":[28],"and":[29,62,136,181,191,231],"locate":[30],"the":[31,45,53,55,73,81,108,139,176,211,215],"occurrences":[32],"of":[33,68,138,167,178,214],"any":[34,121],"string":[35],"(the":[36],"query":[37],"pattern)":[38],"in":[39,41,103,117],"T":[40],"time":[42],"proportional":[43,106],"to":[44,52,60,65,77,107,141,187,193,210,224],"query\u2019s":[46],"length.":[47],"The":[48],"earliest":[49],"optimal-time":[50],"solution":[51],"problem,":[54],"suffix":[56,222],"tree,":[57],"dates":[58],"back":[59],"1973":[61],"requires":[63],"up":[64],"two":[66,84],"orders":[67],"magnitude":[69],"more":[70,130],"space":[71,96,105],"than":[72],"plain":[74],"just":[76],"be":[78,92,101,148,161],"stored.":[79],"In":[80,154],"year":[82],"2000,":[83],"breakthrough":[85],"works":[86],"showed":[87],"efficient":[89],"queries":[90],"achieved":[93],"without":[94],"this":[95],"overhead:":[97],"fast":[99],"index":[100,188],"stored":[102],"text\u2019s":[109],"entropy.":[110],"These":[111],"contributions":[112],"had":[113],"an":[114],"enormous":[115],"impact":[116],"bioinformatics:":[118],"today,":[119],"virtually":[120],"DNA":[122],"aligner":[123],"employs":[124],"compressed":[125,179,226],"indexes.":[126],"Recent":[127],"trends":[128],"considered":[129,162],"powerful":[131],"compression":[132],"schemes":[133],"(dictionary":[134],"compressors)":[135],"generalizations":[137],"labeled":[142,151,168,229],"graphs:":[143],"after":[144],"all,":[145],"texts":[146],"viewed":[149],"as":[150,163,200],"directed":[152],"paths.":[153],"turn,":[155],"since":[156],"finite":[157],"state":[158],"automata":[159],"particular":[165],"case":[166],"graphs,":[169],"these":[170],"findings":[171],"created":[172],"bridge":[174],"between":[175],"fields":[177],"regular":[182,189,201,232],"language":[183],"theory,":[184],"ultimately":[185],"allowing":[186],"languages":[190],"promising":[192],"shed":[194],"new":[195],"light":[196],"on":[197],"problems,":[198],"such":[199],"expression":[202],"matching.":[203],"This":[204],"survey":[205],"gentle":[208],"introduction":[209],"main":[212],"landmarks":[213],"fascinating":[216],"journey":[217],"took":[219],"us":[220],"from":[221],"trees":[223],"today\u2019s":[225],"indexes":[227],"graphs":[230],"languages.":[233]},"counts_by_year":[],"updated_date":"2026-02-09T09:26:11.010843","created_date":"2025-10-10T00:00:00"}
