{"id":"https://openalex.org/W3096509759","doi":"https://doi.org/10.3390/a13110272","title":"Exploring the Dynamic Organization of Random and Evolved Boolean Networks","display_name":"Exploring the Dynamic Organization of Random and Evolved Boolean Networks","publication_year":2020,"publication_date":"2020-10-28","ids":{"openalex":"https://openalex.org/W3096509759","doi":"https://doi.org/10.3390/a13110272","mag":"3096509759"},"language":"en","primary_location":{"id":"doi:10.3390/a13110272","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a13110272","pdf_url":"https://www.mdpi.com/1999-4893/13/11/272/pdf?version=1603881586","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/13/11/272/pdf?version=1603881586","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028279403","display_name":"Gianluca D\u2019Addese","orcid":"https://orcid.org/0000-0001-7755-0893"},"institutions":[{"id":"https://openalex.org/I122346577","display_name":"University of Modena and Reggio Emilia","ror":"https://ror.org/02d4c4y02","country_code":"IT","type":"education","lineage":["https://openalex.org/I122346577"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianluca d\u2019Addese","raw_affiliation_strings":["Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy","institution_ids":["https://openalex.org/I122346577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006990034","display_name":"Salvatore Magr\u00ec","orcid":null},"institutions":[{"id":"https://openalex.org/I122346577","display_name":"University of Modena and Reggio Emilia","ror":"https://ror.org/02d4c4y02","country_code":"IT","type":"education","lineage":["https://openalex.org/I122346577"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Salvatore Magr\u00ec","raw_affiliation_strings":["Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy","institution_ids":["https://openalex.org/I122346577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035698777","display_name":"Roberto Serra","orcid":"https://orcid.org/0000-0002-1417-5106"},"institutions":[{"id":"https://openalex.org/I122346577","display_name":"University of Modena and Reggio Emilia","ror":"https://ror.org/02d4c4y02","country_code":"IT","type":"education","lineage":["https://openalex.org/I122346577"]},{"id":"https://openalex.org/I4210137980","display_name":"European Centre for Living Technology","ror":"https://ror.org/04kesq777","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210137980"]},{"id":"https://openalex.org/I55027601","display_name":"Netherlands Institute for Advanced Study in the Humanities and Social Sciences","ror":"https://ror.org/04z3wz653","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1322597698","https://openalex.org/I55027601"]},{"id":"https://openalex.org/I887064364","display_name":"University of Amsterdam","ror":"https://ror.org/04dkp9463","country_code":"NL","type":"education","lineage":["https://openalex.org/I887064364"]}],"countries":["IT","NL"],"is_corresponding":false,"raw_author_name":"Roberto Serra","raw_affiliation_strings":["Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy","European Centre for Living Technology, 30123 Venezia VE, Italy","Institute for Advanced Study, University of Amsterdam, 1012 WX Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy","institution_ids":["https://openalex.org/I122346577"]},{"raw_affiliation_string":"European Centre for Living Technology, 30123 Venezia VE, Italy","institution_ids":["https://openalex.org/I4210137980"]},{"raw_affiliation_string":"Institute for Advanced Study, University of Amsterdam, 1012 WX Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I55027601","https://openalex.org/I887064364"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007379202","display_name":"Marco Villani","orcid":"https://orcid.org/0000-0002-5991-5470"},"institutions":[{"id":"https://openalex.org/I122346577","display_name":"University of Modena and Reggio Emilia","ror":"https://ror.org/02d4c4y02","country_code":"IT","type":"education","lineage":["https://openalex.org/I122346577"]},{"id":"https://openalex.org/I4210137980","display_name":"European Centre for Living Technology","ror":"https://ror.org/04kesq777","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210137980"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Marco Villani","raw_affiliation_strings":["Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy","European Centre for Living Technology, 30123 Venezia VE, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, via Campi 213a, 41125 Modena, Italy","institution_ids":["https://openalex.org/I122346577"]},{"raw_affiliation_string":"European Centre for Living Technology, 30123 Venezia VE, Italy","institution_ids":["https://openalex.org/I4210137980"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5007379202"],"corresponding_institution_ids":["https://openalex.org/I122346577","https://openalex.org/I4210137980"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.0836,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.46095104,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"13","issue":"11","first_page":"272","last_page":"272"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11252","display_name":"Evolutionary Game Theory and Cooperation","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9757999777793884,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.729971706867218},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.573779821395874},{"id":"https://openalex.org/keywords/boolean-network","display_name":"Boolean network","score":0.5406835079193115},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.4882400333881378},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.475352019071579},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3088952302932739},{"id":"https://openalex.org/keywords/boolean-function","display_name":"Boolean function","score":0.27520182728767395},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.08345207571983337}],"concepts":[{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.729971706867218},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.573779821395874},{"id":"https://openalex.org/C134444547","wikidata":"https://www.wikidata.org/wiki/Q585230","display_name":"Boolean network","level":3,"score":0.5406835079193115},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.4882400333881378},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.475352019071579},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3088952302932739},{"id":"https://openalex.org/C187455244","wikidata":"https://www.wikidata.org/wiki/Q942353","display_name":"Boolean function","level":2,"score":0.27520182728767395},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.08345207571983337},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/a13110272","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a13110272","pdf_url":"https://www.mdpi.com/1999-4893/13/11/272/pdf?version=1603881586","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:8703ba9e7d224a56a688b6f22a46b9f3","is_oa":true,"landing_page_url":"https://doaj.org/article/8703ba9e7d224a56a688b6f22a46b9f3","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 13, Iss 11, p 272 (2020)","raw_type":"article"},{"id":"pmh:oai:iris.unimore.it:11380/1245036","is_oa":true,"landing_page_url":"http://hdl.handle.net/11380/1245036","pdf_url":null,"source":{"id":"https://openalex.org/S4306400718","display_name":"IRIS UNIMORE (University of Modena and Reggio Emilia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I122346577","host_organization_name":"University of Modena and Reggio Emilia","host_organization_lineage":["https://openalex.org/I122346577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:mdpi.com:/1999-4893/13/11/272/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/a13110272","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms; Volume 13; Issue 11; Pages: 272","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/a13110272","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a13110272","pdf_url":"https://www.mdpi.com/1999-4893/13/11/272/pdf?version=1603881586","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4479375518","display_name":null,"funder_award_id":"FAR2019","funder_id":"https://openalex.org/F4320311022","funder_display_name":"Universit\u00e0 Degli Studi di Modena e Reggio Emila"},{"id":"https://openalex.org/G7794062290","display_name":null,"funder_award_id":"Modena","funder_id":"https://openalex.org/F4320311022","funder_display_name":"Universit\u00e0 Degli Studi di Modena e Reggio Emila"}],"funders":[{"id":"https://openalex.org/F4320311022","display_name":"Universit\u00e0 Degli Studi di Modena e Reggio Emila","ror":"https://ror.org/02d4c4y02"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3096509759.pdf","grobid_xml":"https://content.openalex.org/works/W3096509759.grobid-xml"},"referenced_works_count":85,"referenced_works":["https://openalex.org/W84428182","https://openalex.org/W585638923","https://openalex.org/W592737779","https://openalex.org/W654187099","https://openalex.org/W1480880155","https://openalex.org/W1508249476","https://openalex.org/W1513851163","https://openalex.org/W1544632947","https://openalex.org/W1553010236","https://openalex.org/W1580450749","https://openalex.org/W1599424389","https://openalex.org/W1831875533","https://openalex.org/W1849730171","https://openalex.org/W1875731073","https://openalex.org/W1968164782","https://openalex.org/W1971224531","https://openalex.org/W1976744965","https://openalex.org/W2001783108","https://openalex.org/W2002619840","https://openalex.org/W2008620264","https://openalex.org/W2009013588","https://openalex.org/W2018505677","https://openalex.org/W2022346834","https://openalex.org/W2031369606","https://openalex.org/W2033637309","https://openalex.org/W2034455925","https://openalex.org/W2038195874","https://openalex.org/W2042802301","https://openalex.org/W2044890688","https://openalex.org/W2045924769","https://openalex.org/W2061438946","https://openalex.org/W2065178468","https://openalex.org/W2081466838","https://openalex.org/W2081666280","https://openalex.org/W2087471103","https://openalex.org/W2090414491","https://openalex.org/W2095532426","https://openalex.org/W2107941094","https://openalex.org/W2112090702","https://openalex.org/W2119620862","https://openalex.org/W2124637492","https://openalex.org/W2124823351","https://openalex.org/W2126554879","https://openalex.org/W2132089981","https://openalex.org/W2133131640","https://openalex.org/W2142211992","https://openalex.org/W2146264532","https://openalex.org/W2150312211","https://openalex.org/W2156335342","https://openalex.org/W2160533336","https://openalex.org/W2177218873","https://openalex.org/W2244602389","https://openalex.org/W2274600189","https://openalex.org/W2290883490","https://openalex.org/W2488392620","https://openalex.org/W2495747600","https://openalex.org/W2606866119","https://openalex.org/W2737442384","https://openalex.org/W2757821154","https://openalex.org/W2766023407","https://openalex.org/W2775241190","https://openalex.org/W2777482433","https://openalex.org/W2789758786","https://openalex.org/W2792401467","https://openalex.org/W2795013558","https://openalex.org/W2795194880","https://openalex.org/W2809430074","https://openalex.org/W2809723281","https://openalex.org/W2899544618","https://openalex.org/W2901078150","https://openalex.org/W2916522504","https://openalex.org/W2953776014","https://openalex.org/W2963103847","https://openalex.org/W2963796328","https://openalex.org/W2968508208","https://openalex.org/W3010527779","https://openalex.org/W3041343063","https://openalex.org/W3087107130","https://openalex.org/W3100933494","https://openalex.org/W3101693422","https://openalex.org/W4235019172","https://openalex.org/W4388252848","https://openalex.org/W6636053142","https://openalex.org/W6745999471","https://openalex.org/W6783270728"],"related_works":["https://openalex.org/W1979597421","https://openalex.org/W2007980826","https://openalex.org/W2061531152","https://openalex.org/W3002753104","https://openalex.org/W2077600819","https://openalex.org/W2142036596","https://openalex.org/W2072657027","https://openalex.org/W2600246793","https://openalex.org/W4238204885","https://openalex.org/W2963966623"],"abstract_inverted_index":{"The":[0],"properties":[1],"of":[2,6,16,33,48,66,82,121,133,151,156],"most":[3],"systems":[4,49],"composed":[5],"many":[7],"interacting":[8],"elements":[9],"are":[10,30],"neither":[11],"determined":[12],"by":[13,22,139],"the":[14,17,23,31,34,63,67,97,118,122,134,140,154,162],"topology":[15,37,70,98],"interaction":[18],"network":[19],"alone,":[20],"nor":[21],"dynamical":[24,58],"laws":[25],"in":[26,105,148],"isolation.":[27],"Rather,":[28],"they":[29],"outcome":[32],"interplay":[35],"between":[36,69],"and":[38,54,71,73,79,143],"dynamics.":[39],"In":[40],"this":[41],"paper,":[42],"we":[43],"consider":[44],"four":[45],"different":[46],"types":[47,155],"with":[50,55],"critical":[51],"dynamic":[52,80,106,124,157],"regime":[53],"increasingly":[56],"complex":[57],"organization":[59,137],"(loosely":[60],"defined":[61],"as":[62],"emergent":[64],"property":[65],"interactions":[68],"dynamics)":[72],"analyze":[74],"them":[75],"from":[76],"a":[77,102],"structural":[78],"point":[81],"view.":[83],"A":[84,108],"first":[85],"noteworthy":[86],"result,":[87],"previously":[88],"hypothesized":[89],"but":[90],"never":[91],"quantified":[92],"so":[93,126],"far,":[94],"is":[95,111],"that":[96,112,129],"per":[99],"se":[100],"induces":[101],"notable":[103],"increase":[104],"organization.":[107],"second":[109],"observation":[110],"evolution":[113],"does":[114],"not":[115],"change":[116],"dramatically":[117],"size":[119],"distribution":[120],"present":[123,136],"groups,":[125],"it":[127,130],"seems":[128],"keeps":[131],"track":[132],"already":[135],"induced":[138],"topology.":[141],"Finally,":[142],"similarly":[144],"to":[145],"what":[146],"happens":[147],"other":[149],"applications":[150],"evolutionary":[152],"algorithms,":[153],"changes":[158],"strongly":[159],"depend":[160],"upon":[161],"used":[163],"fitness":[164],"function.":[165]},"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2020-11-09T00:00:00"}