{"id":"https://openalex.org/W7133308816","doi":"https://doi.org/10.3389/fbinf.2026.1787360","title":"From clinical phenotypes to genomic signatures: machine learning integration for precision tuberculosis treatment prediction","display_name":"From clinical phenotypes to genomic signatures: machine learning integration for precision tuberculosis treatment prediction","publication_year":2026,"publication_date":"2026-03-03","ids":{"openalex":"https://openalex.org/W7133308816","doi":"https://doi.org/10.3389/fbinf.2026.1787360","pmid":"https://pubmed.ncbi.nlm.nih.gov/41852497"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2026.1787360","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2026.1787360","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1787360/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1787360/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5127977791","display_name":"Liping Li","orcid":null},"institutions":[{"id":"https://openalex.org/I4210131857","display_name":"Yunnan Forestry Vocational and Technical College","ror":"https://ror.org/03d8y7214","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210131857"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Liping Li","raw_affiliation_strings":["Yizhi School of Agriculture and Forestry, Xianyang Vocational Technical College"],"affiliations":[{"raw_affiliation_string":"Yizhi School of Agriculture and Forestry, Xianyang Vocational Technical College","institution_ids":["https://openalex.org/I4210131857"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020335337","display_name":"Huanqing Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]},{"id":"https://openalex.org/I99418890","display_name":"Northwestern Polytechnic University","ror":"https://ror.org/05wn69s11","country_code":"US","type":"education","lineage":["https://openalex.org/I99418890"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Huanqing Liu","raw_affiliation_strings":["Information Management Office, Northwestern Polytechnical University"],"affiliations":[{"raw_affiliation_string":"Information Management Office, Northwestern Polytechnical University","institution_ids":["https://openalex.org/I17145004","https://openalex.org/I99418890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5123455442","display_name":"Qian Lei","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162379","display_name":"Xi'an Chest Hospital","ror":"https://ror.org/052f2mx26","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210162379"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qian Lei","raw_affiliation_strings":["Department of Pharmacy, Xi\u2019an Chest Hospital"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Xi\u2019an Chest Hospital","institution_ids":["https://openalex.org/I4210162379"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5127874027","display_name":"Tingting Li","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162379","display_name":"Xi'an Chest Hospital","ror":"https://ror.org/052f2mx26","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210162379"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tingting Li","raw_affiliation_strings":["Drug Clinical Trial Institution Office, Xi\u2019an Chest Hospital"],"affiliations":[{"raw_affiliation_string":"Drug Clinical Trial Institution Office, Xi\u2019an Chest Hospital","institution_ids":["https://openalex.org/I4210162379"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5127977791"],"corresponding_institution_ids":["https://openalex.org/I4210131857"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.49920371,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"6","issue":null,"first_page":"1787360","last_page":"1787360"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.5899999737739563,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.5899999737739563,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.09220000356435776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.04399999976158142,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensemble-learning","display_name":"Ensemble learning","score":0.4945000112056732},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.4934000074863434},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.48170000314712524},{"id":"https://openalex.org/keywords/predictive-modelling","display_name":"Predictive modelling","score":0.4578999876976013},{"id":"https://openalex.org/keywords/feature-engineering","display_name":"Feature engineering","score":0.4429999887943268},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.43290001153945923},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.40130001306533813},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.40049999952316284},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.3930000066757202}],"concepts":[{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.7409999966621399},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6579999923706055},{"id":"https://openalex.org/C45942800","wikidata":"https://www.wikidata.org/wiki/Q245652","display_name":"Ensemble learning","level":2,"score":0.4945000112056732},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.4934000074863434},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.48170000314712524},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47029998898506165},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.4578999876976013},{"id":"https://openalex.org/C2778827112","wikidata":"https://www.wikidata.org/wiki/Q22245680","display_name":"Feature engineering","level":3,"score":0.4429999887943268},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.43290001153945923},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4092999994754791},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.40130001306533813},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.40049999952316284},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.3930000066757202},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.37700000405311584},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.37059998512268066},{"id":"https://openalex.org/C119898033","wikidata":"https://www.wikidata.org/wiki/Q3433888","display_name":"Ensemble forecasting","level":2,"score":0.34700000286102295},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34119999408721924},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.3379000127315521},{"id":"https://openalex.org/C27181475","wikidata":"https://www.wikidata.org/wiki/Q541014","display_name":"Cross-validation","level":2,"score":0.3345000147819519},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33070001006126404},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.3154999911785126},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.3082999885082245},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3052999973297119},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.2985000014305115},{"id":"https://openalex.org/C136389625","wikidata":"https://www.wikidata.org/wiki/Q334384","display_name":"Supervised learning","level":3,"score":0.296099990606308},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.29420000314712524},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.2732999920845032},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.2703999876976013},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.26750001311302185},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.2653999924659729},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.258899986743927},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.25870001316070557},{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.2572999894618988}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2026.1787360","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2026.1787360","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1787360/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41852497","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41852497","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:b6c038252cef447dbd031da2780db8f4","is_oa":true,"landing_page_url":"https://doaj.org/article/b6c038252cef447dbd031da2780db8f4","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 6 (2026)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12993280","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12993280/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2026.1787360","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2026.1787360","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1787360/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.48537787795066833}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7133308816.pdf","grobid_xml":"https://content.openalex.org/works/W7133308816.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1972805278","https://openalex.org/W2013706307","https://openalex.org/W2054772081","https://openalex.org/W2060248414","https://openalex.org/W2068170128","https://openalex.org/W2074759507","https://openalex.org/W2105296171","https://openalex.org/W2109543073","https://openalex.org/W2111758455","https://openalex.org/W2124249157","https://openalex.org/W2133928209","https://openalex.org/W2164309428","https://openalex.org/W2176621021","https://openalex.org/W2200954247","https://openalex.org/W2526188806","https://openalex.org/W2561418870","https://openalex.org/W2591345815","https://openalex.org/W2602169678","https://openalex.org/W2611138580","https://openalex.org/W2788398649","https://openalex.org/W2796153844","https://openalex.org/W2886752110","https://openalex.org/W2897480194","https://openalex.org/W2915888605","https://openalex.org/W2951254340","https://openalex.org/W3003192283","https://openalex.org/W3093125326","https://openalex.org/W3101663363","https://openalex.org/W3174786846","https://openalex.org/W4210627381","https://openalex.org/W4390065865","https://openalex.org/W4410910793"],"related_works":[],"abstract_inverted_index":{"https://www.chictr.org.cn/,":[0],"ChiCTR2300074328,":[1],"03/08/2023.":[2]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2026-03-04T00:00:00"}
