{"id":"https://openalex.org/W4392966654","doi":"https://doi.org/10.3389/fbinf.2024.1384497","title":"Sequencing technologies and hardware-accelerated parallel computing transform computational genomics research","display_name":"Sequencing technologies and hardware-accelerated parallel computing transform computational genomics research","publication_year":2024,"publication_date":"2024-03-19","ids":{"openalex":"https://openalex.org/W4392966654","doi":"https://doi.org/10.3389/fbinf.2024.1384497","pmid":"https://pubmed.ncbi.nlm.nih.gov/38567256"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2024.1384497","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2024.1384497","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2024.1384497/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2024.1384497/pdf?isPublishedV2=False","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062891877","display_name":"Michael Olbrich","orcid":"https://orcid.org/0000-0003-2789-3382"},"institutions":[{"id":"https://openalex.org/I176601375","display_name":"Khalifa University of Science and Technology","ror":"https://ror.org/05hffr360","country_code":"AE","type":"education","lineage":["https://openalex.org/I176601375"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Michael Olbrich","raw_affiliation_strings":["Center for Biotechnology, Khalifa University for Science and Technology, Abu Dhabi, United Arab Emirates","Center for Biotechnology, United Arab Emirates"],"affiliations":[{"raw_affiliation_string":"Center for Biotechnology, Khalifa University for Science and Technology, Abu Dhabi, United Arab Emirates","institution_ids":["https://openalex.org/I176601375"]},{"raw_affiliation_string":"Center for Biotechnology, United Arab Emirates","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113147066","display_name":"Lennart Bartels","orcid":null},"institutions":[{"id":"https://openalex.org/I4210128097","display_name":"Research Center Borstel - Leibniz Lung Center","ror":"https://ror.org/036ragn25","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210128097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lennart Bartels","raw_affiliation_strings":["Biomolecular Data Science in Pneumology, Research Center Borstel, Borstel, Germany","Biomolecular Data Science in Pneumology, Germany"],"affiliations":[{"raw_affiliation_string":"Biomolecular Data Science in Pneumology, Research Center Borstel, Borstel, Germany","institution_ids":["https://openalex.org/I4210128097"]},{"raw_affiliation_string":"Biomolecular Data Science in Pneumology, Germany","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016549644","display_name":"Inken Wohlers","orcid":"https://orcid.org/0000-0003-4004-0464"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]},{"id":"https://openalex.org/I4210128097","display_name":"Research Center Borstel - Leibniz Lung Center","ror":"https://ror.org/036ragn25","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210128097"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Inken Wohlers","raw_affiliation_strings":["Biomolecular Data Science in Pneumology, Research Center Borstel, Borstel, Germany","University of L\u00fcbeck, L\u00fcbeck, Germany","University of L\u00fcbeck, Germany","Biomolecular Data Science in Pneumology, Germany"],"affiliations":[{"raw_affiliation_string":"Biomolecular Data Science in Pneumology, Research Center Borstel, Borstel, Germany","institution_ids":["https://openalex.org/I4210128097"]},{"raw_affiliation_string":"University of L\u00fcbeck, L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]},{"raw_affiliation_string":"University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]},{"raw_affiliation_string":"Biomolecular Data Science in Pneumology, Germany","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5016549644"],"corresponding_institution_ids":["https://openalex.org/I4210128097","https://openalex.org/I9341345"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.4486,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.61443538,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"4","issue":null,"first_page":"1384497","last_page":"1384497"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.612440288066864},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5711682438850403},{"id":"https://openalex.org/keywords/volume","display_name":"Volume (thermodynamics)","score":0.5493384003639221},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.48926064372062683},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.40615564584732056},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40206673741340637},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.328799843788147},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.19550150632858276},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16695743799209595},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10954397916793823},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.07938593626022339}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.612440288066864},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5711682438850403},{"id":"https://openalex.org/C20556612","wikidata":"https://www.wikidata.org/wiki/Q4469374","display_name":"Volume (thermodynamics)","level":2,"score":0.5493384003639221},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.48926064372062683},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.40615564584732056},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40206673741340637},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.328799843788147},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.19550150632858276},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16695743799209595},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10954397916793823},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.07938593626022339},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2024.1384497","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2024.1384497","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2024.1384497/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38567256","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38567256","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10985184","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10985184","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10985184/pdf/fbinf-04-1384497.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:989348c3e55743498ef3af0398f784b4","is_oa":true,"landing_page_url":"https://doaj.org/article/989348c3e55743498ef3af0398f784b4","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 4 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2024.1384497","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2024.1384497","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2024.1384497/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4392966654.pdf"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W2110417468","https://openalex.org/W2119180969","https://openalex.org/W2120141270","https://openalex.org/W2150550043","https://openalex.org/W2605897695","https://openalex.org/W2889664156","https://openalex.org/W2966929769","https://openalex.org/W2973113902","https://openalex.org/W2997518568","https://openalex.org/W3033870872","https://openalex.org/W3036189339","https://openalex.org/W3042374389","https://openalex.org/W3047598142","https://openalex.org/W3113006061","https://openalex.org/W3118986139","https://openalex.org/W3128198169","https://openalex.org/W3130788486","https://openalex.org/W3146294934","https://openalex.org/W3159728495","https://openalex.org/W3214020344","https://openalex.org/W3216588755","https://openalex.org/W4205170775","https://openalex.org/W4205493727","https://openalex.org/W4205617913","https://openalex.org/W4212774754","https://openalex.org/W4220999759","https://openalex.org/W4239734004","https://openalex.org/W4255836900","https://openalex.org/W4283207430","https://openalex.org/W4286005461","https://openalex.org/W4290839014","https://openalex.org/W4294052020","https://openalex.org/W4311822265","https://openalex.org/W4315707395","https://openalex.org/W4321112378","https://openalex.org/W4376133202","https://openalex.org/W4378907379","https://openalex.org/W4386113054","https://openalex.org/W4388651733","https://openalex.org/W4391876502","https://openalex.org/W6766978945"],"related_works":["https://openalex.org/W2798121181","https://openalex.org/W2016805743","https://openalex.org/W4242592912","https://openalex.org/W435830328","https://openalex.org/W2087896742","https://openalex.org/W1989025965","https://openalex.org/W2328676785","https://openalex.org/W2322380964","https://openalex.org/W2587527225","https://openalex.org/W4237443457"],"abstract_inverted_index":{"OPINION":[0],"article":[1],"Front.":[2],"Bioinform.,":[3],"19":[4],"March":[5],"2024Sec.":[6],"Genomic":[7],"Analysis":[8],"Volume":[9],"4":[10],"-":[11],"2024":[12],"|":[13],"https://doi.org/10.3389/fbinf.2024.1384497":[14]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
