{"id":"https://openalex.org/W4379053330","doi":"https://doi.org/10.3389/frma.2023.1070390","title":"Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model","display_name":"Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model","publication_year":2023,"publication_date":"2023-05-30","ids":{"openalex":"https://openalex.org/W4379053330","doi":"https://doi.org/10.3389/frma.2023.1070390","pmid":"https://pubmed.ncbi.nlm.nih.gov/37324282"},"language":"en","primary_location":{"id":"doi:10.3389/frma.2023.1070390","is_oa":true,"landing_page_url":"https://doi.org/10.3389/frma.2023.1070390","pdf_url":"https://www.frontiersin.org/articles/10.3389/frma.2023.1070390/pdf","source":{"id":"https://openalex.org/S2596295431","display_name":"Frontiers in Research Metrics and Analytics","issn_l":"2504-0537","issn":["2504-0537"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Research Metrics and Analytics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/frma.2023.1070390/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048926347","display_name":"Pauline Karega","orcid":"https://orcid.org/0000-0001-7974-048X"},"institutions":[{"id":"https://openalex.org/I12859529","display_name":"University of Nairobi","ror":"https://ror.org/02y9nww90","country_code":"KE","type":"education","lineage":["https://openalex.org/I12859529"]},{"id":"https://openalex.org/I168685008","display_name":"International Centre of Insect Physiology and Ecology","ror":"https://ror.org/03qegss47","country_code":"KE","type":"facility","lineage":["https://openalex.org/I168685008"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Pauline Karega","raw_affiliation_strings":["Department of Biochemistry, University of Nairobi, Nairobi, Kenya","International Center of Insect Physiology and Ecology, Nairobi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Nairobi, Nairobi, Kenya","institution_ids":["https://openalex.org/I12859529"]},{"raw_affiliation_string":"International Center of Insect Physiology and Ecology, Nairobi, Kenya","institution_ids":["https://openalex.org/I168685008"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062368609","display_name":"David K. Mwaura","orcid":"https://orcid.org/0000-0001-6318-831X"},"institutions":[{"id":"https://openalex.org/I4210107899","display_name":"Institute of Primate Research","ror":"https://ror.org/01htjvr84","country_code":"KE","type":"facility","lineage":["https://openalex.org/I4210107899"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"David K. Mwaura","raw_affiliation_strings":["Institute of Primate Research (IPR), Nairobi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Primate Research (IPR), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210107899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056974751","display_name":"Kennedy Mwangi","orcid":"https://orcid.org/0000-0003-2561-1521"},"institutions":[{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Kennedy W. Mwangi","raw_affiliation_strings":["International Livestock Research Institute (ILRI), Nairobi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Livestock Research Institute (ILRI), Nairobi, Kenya","institution_ids":["https://openalex.org/I58422712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033850115","display_name":"Margaret Wanjiku","orcid":null},"institutions":[{"id":"https://openalex.org/I26538001","display_name":"San Diego State University","ror":"https://ror.org/0264fdx42","country_code":"US","type":"education","lineage":["https://openalex.org/I26538001"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Margaret Wanjiku","raw_affiliation_strings":["Department of Biology, San Diego State University, San Diego, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, San Diego State University, San Diego, CA, United States","institution_ids":["https://openalex.org/I26538001"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050333192","display_name":"Michael Landi","orcid":"https://orcid.org/0000-0001-5597-7802"},"institutions":[{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]},{"id":"https://openalex.org/I4210111914","display_name":"International Institute of Tropical Agriculture","ror":"https://ror.org/01a0ymj74","country_code":"KE","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I4210111914"]}],"countries":["KE","SE"],"is_corresponding":false,"raw_author_name":"Michael Landi","raw_affiliation_strings":["Department of Bioinformatics, Swedish University of Agricultural Sciences, Uppsala, Sweden","International Institute of Tropical Agriculture, Nairobi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]},{"raw_affiliation_string":"International Institute of Tropical Agriculture, Nairobi, Kenya","institution_ids":["https://openalex.org/I4210111914"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016033031","display_name":"Caleb K. Kibet","orcid":"https://orcid.org/0000-0002-0312-4282"},"institutions":[{"id":"https://openalex.org/I168685008","display_name":"International Centre of Insect Physiology and Ecology","ror":"https://ror.org/03qegss47","country_code":"KE","type":"facility","lineage":["https://openalex.org/I168685008"]}],"countries":["KE"],"is_corresponding":true,"raw_author_name":"Caleb K. Kibet","raw_affiliation_strings":["International Center of Insect Physiology and Ecology, Nairobi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Center of Insect Physiology and Ecology, Nairobi, Kenya","institution_ids":["https://openalex.org/I168685008"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5016033031"],"corresponding_institution_ids":["https://openalex.org/I168685008"],"apc_list":{"value":950,"currency":"USD","value_usd":950},"apc_paid":{"value":950,"currency":"USD","value_usd":950},"fwci":0.593,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.69272606,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"8","issue":null,"first_page":"1070390","last_page":"1070390"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13280","display_name":"Biomedical and Engineering Education","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9541000127792358,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/open-science","display_name":"Open science","score":0.5520918965339661},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5366171598434448},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5220379829406738},{"id":"https://openalex.org/keywords/curriculum","display_name":"Curriculum","score":0.5102295875549316},{"id":"https://openalex.org/keywords/trainer","display_name":"Trainer","score":0.4781809151172638},{"id":"https://openalex.org/keywords/medical-education","display_name":"Medical education","score":0.3369612395763397},{"id":"https://openalex.org/keywords/knowledge-management","display_name":"Knowledge management","score":0.33365076780319214},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3285502791404724},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.23302507400512695},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.19979152083396912},{"id":"https://openalex.org/keywords/pedagogy","display_name":"Pedagogy","score":0.11139318346977234}],"concepts":[{"id":"https://openalex.org/C2778149293","wikidata":"https://www.wikidata.org/wiki/Q309823","display_name":"Open science","level":2,"score":0.5520918965339661},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5366171598434448},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5220379829406738},{"id":"https://openalex.org/C47177190","wikidata":"https://www.wikidata.org/wiki/Q207137","display_name":"Curriculum","level":2,"score":0.5102295875549316},{"id":"https://openalex.org/C2780463512","wikidata":"https://www.wikidata.org/wiki/Q15122700","display_name":"Trainer","level":2,"score":0.4781809151172638},{"id":"https://openalex.org/C509550671","wikidata":"https://www.wikidata.org/wiki/Q126945","display_name":"Medical education","level":1,"score":0.3369612395763397},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.33365076780319214},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3285502791404724},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.23302507400512695},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.19979152083396912},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.11139318346977234},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/frma.2023.1070390","is_oa":true,"landing_page_url":"https://doi.org/10.3389/frma.2023.1070390","pdf_url":"https://www.frontiersin.org/articles/10.3389/frma.2023.1070390/pdf","source":{"id":"https://openalex.org/S2596295431","display_name":"Frontiers in Research Metrics and Analytics","issn_l":"2504-0537","issn":["2504-0537"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Research Metrics and Analytics","raw_type":"journal-article"},{"id":"pmid:37324282","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37324282","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in research metrics and analytics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10267827","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10267827","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10267827/pdf/frma-08-1070390.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Res Metr Anal","raw_type":"Text"},{"id":"pmh:oai:cgspace.cgiar.org:10568/130589","is_oa":true,"landing_page_url":"https://hdl.handle.net/10568/130589","pdf_url":null,"source":{"id":"https://openalex.org/S4306402055","display_name":"CGSPace A Repository of Agricultural Research Outputs (Consultative Group for International Agricultural Research)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1286583668","host_organization_name":"CGIAR","host_organization_lineage":["https://openalex.org/I1286583668"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Research Metrics and Analytics","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:005c9e62b7f64fc79f3086b1f37a9496","is_oa":true,"landing_page_url":"https://doaj.org/article/005c9e62b7f64fc79f3086b1f37a9496","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Research Metrics and Analytics, Vol 8 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/frma.2023.1070390","is_oa":true,"landing_page_url":"https://doi.org/10.3389/frma.2023.1070390","pdf_url":"https://www.frontiersin.org/articles/10.3389/frma.2023.1070390/pdf","source":{"id":"https://openalex.org/S2596295431","display_name":"Frontiers in Research Metrics and Analytics","issn_l":"2504-0537","issn":["2504-0537"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Research Metrics and Analytics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4379053330.pdf"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1927291718","https://openalex.org/W1972581523","https://openalex.org/W1977962927","https://openalex.org/W2025004204","https://openalex.org/W2116918946","https://openalex.org/W2165429918","https://openalex.org/W2192037502","https://openalex.org/W2463568293","https://openalex.org/W2607382887","https://openalex.org/W2742478344","https://openalex.org/W2746715093","https://openalex.org/W2749319771","https://openalex.org/W2788436468","https://openalex.org/W2802958945","https://openalex.org/W2905515949","https://openalex.org/W2943216811","https://openalex.org/W2949550946","https://openalex.org/W2953425107","https://openalex.org/W2964163987","https://openalex.org/W3029578895","https://openalex.org/W3093651401","https://openalex.org/W3097603028","https://openalex.org/W3106869320","https://openalex.org/W3113858325","https://openalex.org/W3130912132","https://openalex.org/W3159812422","https://openalex.org/W3161645467","https://openalex.org/W3171995498","https://openalex.org/W3201938018","https://openalex.org/W3204304595","https://openalex.org/W3204348236","https://openalex.org/W3207681730","https://openalex.org/W3209673534","https://openalex.org/W3211842793","https://openalex.org/W4223976256"],"related_works":["https://openalex.org/W1985489398","https://openalex.org/W638029546","https://openalex.org/W4285792946","https://openalex.org/W4388176369","https://openalex.org/W2000494260","https://openalex.org/W154293939","https://openalex.org/W1866966336","https://openalex.org/W2035734194","https://openalex.org/W2046935328","https://openalex.org/W2049119523"],"abstract_inverted_index":{"We":[0,86,203,213],"have":[1,238],"applied":[2,177],"the":[3,19,88,94,100,119,139,178,181,192,198,205,208,221,226,229],"sensitize-train-hack-community":[4],"model":[5],"to":[6,33,65,90,107,231,241,254],"build":[7],"awareness":[8,134],"of":[9,21,93,96,200,207],"and":[10,24,29,36,71,81,103,110,127,135,141,146,158,167,184,190,194,217,251,259],"capacity":[11],"in":[12,14,46,53,83,116,143,188,245],"bioinformatics":[13,49,72,101,109],"Kenya.":[15],"Open":[16,38,57,128],"science":[17,22,39,58,70,98,112,145],"is":[18,40,50],"practice":[20],"openly":[23],"collaboratively,":[25],"with":[26,138,220],"tools,":[27],"techniques,":[28],"data":[30],"freely":[31],"shared":[32],"facilitate":[34],"reuse":[35],"collaboration.":[37],"not":[41],"a":[42,104,152,156],"mandatory":[43],"curriculum":[44],"course":[45],"schools,":[47],"whereas":[48],"relatively":[51],"new":[52],"some":[54],"African":[55],"regions.":[56,85],"tools":[59,142],"can":[60],"significantly":[61],"enhance":[62],"bioinformatics,":[63],"leading":[64],"increased":[66],"reproducibility.":[67],"However,":[68],"open":[69,97,111,144],"skills,":[73],"especially":[74],"blended,":[75],"are":[76],"still":[77],"lacking":[78],"among":[79,99],"students":[80],"researchers":[82,137,219],"resource-constrained":[84,246],"note":[87],"need":[89],"be":[91],"aware":[92],"power":[95],"community":[102,164],"clear":[105],"strategy":[106],"learn":[108],"skills":[113,140,222,230],"for":[114],"use":[115],"research.":[117],"Using":[118],"OpenScienceKE":[120],"framework-Sensitize,":[121],"Train,":[122],"Hack,":[123],"Collaborate/Community-the":[124],"BOSS":[125,182],"(Bioinformatics":[126],"Science":[129],"Skills)":[130],"virtual":[131,243],"events":[132,183,193,209,244],"built":[133],"empowered":[136],"bioinformatics.":[147],"Sensitization":[148],"was":[149],"achieved":[150],"through":[151,155,162,165,210],"symposium,":[153],"training":[154],"workshop":[157],"train-the-trainer":[159],"program,":[160],"hack":[161],"mini-projects,":[163],"conferences,":[166],"continuous":[168],"meet-ups.":[169],"In":[170],"this":[171],"paper,":[172],"we":[173,176,237],"discuss":[174],"how":[175,240],"framework":[179],"during":[180],"highlight":[185],"lessons":[186],"learnt":[187],"planning":[189],"executing":[191],"their":[195],"impact":[196,206],"on":[197],"outcome":[199],"each":[201],"phase.":[202],"evaluate":[204],"anonymous":[211],"surveys.":[212],"show":[214],"that":[215],"sensitizing":[216],"empowering":[218],"works":[223],"best":[224],"when":[225],"participants":[227],"apply":[228],"real-world":[232],"problems:":[233],"project-based":[234],"learning.":[235],"Furthermore,":[236],"demonstrated":[239],"implement":[242],"settings":[247],"by":[248],"providing":[249],"Internet":[250],"equipment":[252],"support":[253],"participants,":[255],"thus":[256],"improving":[257],"accessibility":[258],"diversity.":[260]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
