{"id":"https://openalex.org/W4408462948","doi":"https://doi.org/10.3389/fninf.2025.1541184","title":"Developing a multiscale neural connectivity knowledgebase of the autonomic nervous system","display_name":"Developing a multiscale neural connectivity knowledgebase of the autonomic nervous system","publication_year":2025,"publication_date":"2025-03-14","ids":{"openalex":"https://openalex.org/W4408462948","doi":"https://doi.org/10.3389/fninf.2025.1541184","pmid":"https://pubmed.ncbi.nlm.nih.gov/40162160"},"language":"en","primary_location":{"id":"doi:10.3389/fninf.2025.1541184","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2025.1541184","pdf_url":"https://www.frontiersin.org/journals/neuroinformatics/articles/10.3389/fninf.2025.1541184/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/journals/neuroinformatics/articles/10.3389/fninf.2025.1541184/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084416912","display_name":"Fahim T. Imam","orcid":"https://orcid.org/0000-0003-4752-543X"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fahim T. Imam","raw_affiliation_strings":["FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080810417","display_name":"Tom Gillespie","orcid":"https://orcid.org/0000-0002-7509-4801"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas H. Gillespie","raw_affiliation_strings":["FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020403538","display_name":"Ilias Ziogas","orcid":"https://orcid.org/0000-0002-9210-2455"},"institutions":[{"id":"https://openalex.org/I4210129801","display_name":"Southern Plains Agricultural Research Center","ror":"https://ror.org/03s4wsx37","country_code":"US","type":"facility","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210129801","https://openalex.org/I4210145274"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ilias Ziogas","raw_affiliation_strings":["SPARC K-Core, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"SPARC K-Core, La Jolla, CA, United States","institution_ids":["https://openalex.org/I4210129801"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004083577","display_name":"Monique C. Surles-Zeigler","orcid":"https://orcid.org/0000-0002-2308-8813"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Monique C. Surles-Zeigler","raw_affiliation_strings":["FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061957757","display_name":"Susan Tappan","orcid":"https://orcid.org/0000-0001-5120-3770"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Susan Tappan","raw_affiliation_strings":["Rock Maple Science, LLC, Hinesburg, VT, United States"],"affiliations":[{"raw_affiliation_string":"Rock Maple Science, LLC, Hinesburg, VT, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024882547","display_name":"\u0130brahim Burak \u00d6zyurt","orcid":"https://orcid.org/0000-0003-3944-1893"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Burak I. Ozyurt","raw_affiliation_strings":["FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041076559","display_name":"Jyl Boline","orcid":"https://orcid.org/0000-0001-5232-8364"},"institutions":[{"id":"https://openalex.org/I2799419483","display_name":"Applied Minds (United States)","ror":"https://ror.org/03szmqd24","country_code":"US","type":"company","lineage":["https://openalex.org/I2799419483"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jyl Boline","raw_affiliation_strings":["Informed Minds Inc, Walnut Creek, CA, United States"],"affiliations":[{"raw_affiliation_string":"Informed Minds Inc, Walnut Creek, CA, United States","institution_ids":["https://openalex.org/I2799419483"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054690280","display_name":"Bernard de Bono","orcid":"https://orcid.org/0000-0003-0638-5274"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bernard de Bono","raw_affiliation_strings":["Whitby et al., LLC, Indianapolis, IN, United States"],"affiliations":[{"raw_affiliation_string":"Whitby et al., LLC, Indianapolis, IN, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076014872","display_name":"Jeffrey S. Grethe","orcid":"https://orcid.org/0000-0001-5212-7052"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey S. Grethe","raw_affiliation_strings":["FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061037631","display_name":"Maryann E. Martone","orcid":"https://orcid.org/0000-0002-8406-3871"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maryann E. Martone","raw_affiliation_strings":["FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States"],"affiliations":[{"raw_affiliation_string":"FAIR Data Informatics Lab, Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA, United States","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5084416912"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":{"value":2950,"currency":"USD","value_usd":2950},"apc_paid":{"value":2950,"currency":"USD","value_usd":2950},"fwci":2.5275,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.87968461,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"19","issue":null,"first_page":"1541184","last_page":"1541184"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9546999931335449,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7693716287612915},{"id":"https://openalex.org/keywords/knowledge-base","display_name":"Knowledge base","score":0.6295065879821777},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5639896392822266},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.49424245953559875},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3743610680103302},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.275132954120636}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7693716287612915},{"id":"https://openalex.org/C4554734","wikidata":"https://www.wikidata.org/wiki/Q593744","display_name":"Knowledge base","level":2,"score":0.6295065879821777},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5639896392822266},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.49424245953559875},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3743610680103302},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.275132954120636},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fninf.2025.1541184","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2025.1541184","pdf_url":"https://www.frontiersin.org/journals/neuroinformatics/articles/10.3389/fninf.2025.1541184/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:40162160","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40162160","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in neuroinformatics","raw_type":null},{"id":"pmh:oai:escholarship.org:ark:/13030/qt95517072","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/95517072","pdf_url":"https://escholarship.org/content/qt95517072/qt95517072.pdf","source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Neuroinformatics, vol 19","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:7b4d0a92870b4a598d506d98f805dd64","is_oa":true,"landing_page_url":"https://doaj.org/article/7b4d0a92870b4a598d506d98f805dd64","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Neuroinformatics, Vol 19 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:10761174","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11949889","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fninf.2025.1541184","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2025.1541184","pdf_url":"https://www.frontiersin.org/journals/neuroinformatics/articles/10.3389/fninf.2025.1541184/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"},{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G6104008932","display_name":null,"funder_award_id":"3OT2OD030541","funder_id":"https://openalex.org/F4320337349","funder_display_name":"NIH Office of the Director"}],"funders":[{"id":"https://openalex.org/F4320330412","display_name":"Scheme for Promotion of Academic and Research Collaboration","ror":null},{"id":"https://openalex.org/F4320337349","display_name":"NIH Office of the Director","ror":"https://ror.org/00fj8a872"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4408462948.pdf"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1523775645","https://openalex.org/W1986017913","https://openalex.org/W2057275207","https://openalex.org/W2090576698","https://openalex.org/W2116034137","https://openalex.org/W2121557186","https://openalex.org/W2163670493","https://openalex.org/W2302501749","https://openalex.org/W2979202625","https://openalex.org/W3094030525","https://openalex.org/W3131632586","https://openalex.org/W3152534529","https://openalex.org/W3167845120","https://openalex.org/W3174278278","https://openalex.org/W4220660638","https://openalex.org/W4224570771","https://openalex.org/W4242111955","https://openalex.org/W4293215746","https://openalex.org/W4399881058","https://openalex.org/W6633616128"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2377533180"],"abstract_inverted_index":{"The":[0,123],"Stimulating":[1],"Peripheral":[2],"Activity":[3],"to":[4,19,34,66,70,138,155,185],"Relieve":[5],"Conditions":[6],"(SPARC)":[7],"program":[8],"is":[9,33,65,153],"a":[10,109,134,227],"U.S.":[11],"National":[12],"Institutes":[13],"of":[14,23,45,63,74,78,90,103,120,125,176,203,230],"Health":[15],"(NIH)":[16],"funded":[17],"effort":[18],"enhance":[20],"our":[21,39,219],"understanding":[22,44],"the":[24,46,53,72,75,91,98,104,115,164,172,179,187,197,201],"neural":[25],"circuitry":[26],"responsible":[27],"for":[28,84,225],"visceral":[29],"control.":[30],"SPARC's":[31,126],"mission":[32],"identify,":[35],"extract,":[36],"and":[37,43,57,81,118,148,159,174,192,223],"compile":[38],"overall":[40],"existing":[41],"knowledge":[42,69,128,131,181],"autonomic":[47],"nervous":[48,55,85],"system":[49,56,86],"(ANS)":[50],"connectivity":[51,127,140,161,232],"between":[52],"central":[54],"end":[58],"organs.":[59],"A":[60],"major":[61],"goal":[62],"SPARC":[64,92,99,149,165],"use":[67],"this":[68,130,168],"promote":[71],"development":[73],"next":[76],"generation":[77],"neuromodulation":[79],"devices":[80],"bioelectronic":[82],"medicine":[83],"diseases.":[87],"As":[88],"part":[89],"program,":[93],"we":[94,170],"have":[95],"been":[96],"developing":[97,214,226],"Connectivity":[100],"Knowledge":[101],"Base":[102],"Autonomic":[105],"Nervous":[106],"System":[107],"(SCKAN),":[108],"dynamic":[110],"resource":[111,188],"containing":[112],"information":[113,141,215],"about":[114],"origins,":[116],"terminations,":[117],"routing":[119],"ANS":[121,231],"projections.":[122],"distillation":[124],"into":[129],"base":[132],"involves":[133],"rigorous":[135],"curation":[136],"process":[137,183,198],"capture":[139],"provided":[142],"by":[143],"experts,":[144],"published":[145],"literature,":[146],"textbooks,":[147],"scientific":[150],"data.":[151,194],"SCKAN":[152],"used":[154],"automatically":[156],"generate":[157],"anatomical":[158],"functional":[160],"maps":[162],"on":[163],"portal.":[166],"In":[167],"article,":[169],"present":[171],"design":[173],"functionality":[175],"SCKAN,":[177],"including":[178],"detailed":[180],"engineering":[182],"developed":[184],"populate":[186],"with":[189],"high":[190],"quality":[191],"accurate":[193],"We":[195,217],"discuss":[196],"from":[199],"both":[200],"perspective":[202],"SCKAN's":[204],"ontological":[205],"representation":[206],"as":[207,209],"well":[208],"its":[210],"practical":[211,228],"applications":[212],"in":[213],"systems.":[216],"share":[218],"techniques,":[220],"strategies,":[221],"tools":[222],"insights":[224],"knowledgebase":[229],"that":[233],"supports":[234],"continual":[235],"enhancement.":[236]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
