{"id":"https://openalex.org/W4386727800","doi":"https://doi.org/10.3389/fninf.2023.1250260","title":"PyDapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS","display_name":"PyDapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS","publication_year":2023,"publication_date":"2023-09-14","ids":{"openalex":"https://openalex.org/W4386727800","doi":"https://doi.org/10.3389/fninf.2023.1250260","pmid":"https://pubmed.ncbi.nlm.nih.gov/37780458"},"language":"en","primary_location":{"id":"doi:10.3389/fninf.2023.1250260","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2023.1250260","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2023.1250260/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fninf.2023.1250260/pdf?isPublishedV2=False","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5092209198","display_name":"Peter Konradi","orcid":"https://orcid.org/0000-0001-7755-0199"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Peter Konradi","raw_affiliation_strings":["Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067905933","display_name":"Alina Troglio","orcid":"https://orcid.org/0000-0001-7770-4389"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alina Troglio","raw_affiliation_strings":["Research Group Neuroscience, IZKF, RWTH Aachen, Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Group Neuroscience, IZKF, RWTH Aachen, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016104495","display_name":"Ariadna P\u00e9rez Garriga","orcid":"https://orcid.org/0000-0001-8840-1770"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ariadna P\u00e9rez Garriga","raw_affiliation_strings":["Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017440256","display_name":"Aar\u00f3n P\u00e9rez Mart\u00edn","orcid":null},"institutions":[{"id":"https://openalex.org/I171892758","display_name":"Forschungszentrum J\u00fclich","ror":"https://ror.org/02nv7yv05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I171892758"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Aar\u00f3n P\u00e9rez Mart\u00edn","raw_affiliation_strings":["Simulation and Data Lab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, JARA, Forschungszentrum J\u00fclich GmbH, J\u00fclich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Simulation and Data Lab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, JARA, Forschungszentrum J\u00fclich GmbH, J\u00fclich, Germany","institution_ids":["https://openalex.org/I171892758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107278387","display_name":"Rainer R\u00f6hrig","orcid":null},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Rainer R\u00f6hrig","raw_affiliation_strings":["Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014321947","display_name":"Barbara Namer","orcid":"https://orcid.org/0000-0001-7500-2842"},"institutions":[{"id":"https://openalex.org/I181369854","display_name":"Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg","ror":"https://ror.org/00f7hpc57","country_code":"DE","type":"education","lineage":["https://openalex.org/I181369854"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Barbara Namer","raw_affiliation_strings":["Department for Neurophysiology, University Hospital RWTH Aachen, Aachen, Germany","Institute of Physiology and Pathophysiology, Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg, Erlangen, Germany","Research Group Neuroscience, IZKF, RWTH Aachen, Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for Neurophysiology, University Hospital RWTH Aachen, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]},{"raw_affiliation_string":"Institute of Physiology and Pathophysiology, Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg, Erlangen, Germany","institution_ids":["https://openalex.org/I181369854"]},{"raw_affiliation_string":"Research Group Neuroscience, IZKF, RWTH Aachen, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047693689","display_name":"Ekaterina Kutafina","orcid":"https://orcid.org/0000-0002-3430-5123"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ekaterina Kutafina","raw_affiliation_strings":["Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5092209198"],"corresponding_institution_ids":["https://openalex.org/I887968799"],"apc_list":{"value":2950,"currency":"USD","value_usd":2950},"apc_paid":{"value":2950,"currency":"USD","value_usd":2950},"fwci":1.7744,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.84709158,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"17","issue":null,"first_page":"1250260","last_page":"1250260"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11449","display_name":"Mechanical and Optical Resonators","score":0.9857000112533569,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11449","display_name":"Mechanical and Optical Resonators","score":0.9857000112533569,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9592000246047974,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10412","display_name":"Microfluidic and Capillary Electrophoresis Applications","score":0.9567000269889832,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.806073784828186},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.7289342880249023},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5261242389678955},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.49851393699645996},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.4978790283203125},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.435454398393631},{"id":"https://openalex.org/keywords/open-data","display_name":"Open data","score":0.42291563749313354},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3855011761188507},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3074361979961395},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1550721824169159}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.806073784828186},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.7289342880249023},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5261242389678955},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.49851393699645996},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.4978790283203125},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.435454398393631},{"id":"https://openalex.org/C2780535194","wikidata":"https://www.wikidata.org/wiki/Q309901","display_name":"Open data","level":2,"score":0.42291563749313354},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3855011761188507},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3074361979961395},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1550721824169159}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.3389/fninf.2023.1250260","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2023.1250260","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2023.1250260/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:37780458","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37780458","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in neuroinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10539619","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10539619","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10539619/pdf/fninf-17-1250260.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Neuroinform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:555265de2f554abe8409438991f09225","is_oa":true,"landing_page_url":"https://doaj.org/article/555265de2f554abe8409438991f09225","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Neuroinformatics, Vol 17 (2023)","raw_type":"article"},{"id":"pmh:oai:ub.uni-erlangen.de-opus:23946","is_oa":true,"landing_page_url":"https://opus4.kobv.de/opus4-fau/files/23946/fninf-17-1250260-g002.tif","pdf_url":null,"source":{"id":"https://openalex.org/S4306401636","display_name":"OPUS Repository (Kooperativer Bibliotheksverbund Berlin-Brandenburg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"doi:10.18154/rwth-conv-252654","is_oa":true,"landing_page_url":"https://doi.org/10.18154/rwth-conv-252654","pdf_url":null,"source":{"id":"https://openalex.org/S4306401033","display_name":"RWTH Publications (RWTH Aachen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I887968799","host_organization_name":"RWTH Aachen University","host_organization_lineage":["https://openalex.org/I887968799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.3389/fninf.2023.1250260","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2023.1250260","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2023.1250260/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5099500154","display_name":null,"funder_award_id":"FOR 2690","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G846170776","display_name":null,"funder_award_id":"DFG NA 970 3-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8840750273","display_name":null,"funder_award_id":"DE-82","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320324232","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4386727800.pdf"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1983850915","https://openalex.org/W2002938507","https://openalex.org/W2021248019","https://openalex.org/W2028177095","https://openalex.org/W2029452806","https://openalex.org/W2114352872","https://openalex.org/W2302501749","https://openalex.org/W2323306864","https://openalex.org/W2892601996","https://openalex.org/W2911432890","https://openalex.org/W3035965352","https://openalex.org/W3099878876","https://openalex.org/W3198988220","https://openalex.org/W4288445699","https://openalex.org/W4300716329","https://openalex.org/W4377095092","https://openalex.org/W6950251053"],"related_works":["https://openalex.org/W1874546313","https://openalex.org/W990322057","https://openalex.org/W2163871512","https://openalex.org/W935371948","https://openalex.org/W2900950954","https://openalex.org/W2588046813","https://openalex.org/W2153782866","https://openalex.org/W2963056311","https://openalex.org/W4289666893","https://openalex.org/W2891339270"],"abstract_inverted_index":{"In":[0,47,87],"the":[1,38,50,58,105,115,133,151,162],"field":[2],"of":[3,8,52,154,164],"neuroscience,":[4],"a":[5,93,157],"considerable":[6],"number":[7],"commercial":[9],"data":[10,20,26,53,69,83,100,166],"acquisition":[11],"and":[12,79,121,140,145,172],"processing":[13],"solutions":[14],"rely":[15],"on":[16,161,170],"proprietary":[17,85,106,158],"formats":[18,31],"for":[19,129,168],"storage.":[21],"This":[22],"often":[23],"leads":[24],"to":[25,44,75,82,95,99,113,143],"being":[27],"locked":[28],"up":[29],"in":[30,84,119,132,175],"that":[32,101],"are":[33],"only":[34],"accessible":[35],"by":[36],"using":[37,104],"original":[39],"software,":[40],"which":[41],"may":[42],"lead":[43],"interoperability":[45],"problems.":[46],"fact,":[48],"even":[49],"loss":[51],"access":[54,81,98,142],"is":[55],"possible":[56],"if":[57],"software":[59],"becomes":[60],"unsupported,":[61],"changed,":[62],"or":[63],"otherwise":[64],"unavailable.":[65],"To":[66],"ensure":[67],"FAIR":[68],"management,":[70],"strategies":[71],"should":[72],"be":[73],"established":[74],"enable":[76],"long-term,":[77],"independent,":[78],"unified":[80],"formats.":[86],"this":[88],"work,":[89],"we":[90],"demonstrate":[91],"PyDapsys,":[92],"solution":[94],"gain":[96],"open":[97,114,130,141],"was":[102],"acquired":[103],"recording":[107],"system":[108],"DAPSYS.":[109],"PyDapsys":[110,137],"enables":[111],"us":[112],"recorded":[116],"files":[117],"directly":[118],"Python":[120],"saves":[122],"them":[123],"as":[124],"NIX":[125],"files,":[126],"commonly":[127],"used":[128],"research":[131],"electrophysiology":[134],"domain.":[135],"Thus,":[136],"secures":[138],"efficient":[139],"existing":[144],"prospective":[146],"data.":[147],"The":[148],"manuscript":[149],"demonstrates":[150],"complete":[152],"process":[153],"reverse":[155],"engineering":[156],"electrophysiological":[159],"format":[160],"example":[163],"microneurography":[165],"collected":[167],"studies":[169],"pain":[171],"itch":[173],"signaling":[174],"peripheral":[176],"neural":[177],"fibers.":[178]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":5}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2023-09-15T00:00:00"}
