{"id":"https://openalex.org/W2277533176","doi":"https://doi.org/10.3389/fninf.2016.00002","title":"Using Make for Reproducible and Parallel Neuroimaging Workflow and Quality-Assurance","display_name":"Using Make for Reproducible and Parallel Neuroimaging Workflow and Quality-Assurance","publication_year":2016,"publication_date":"2016-02-02","ids":{"openalex":"https://openalex.org/W2277533176","doi":"https://doi.org/10.3389/fninf.2016.00002","mag":"2277533176","pmid":"https://pubmed.ncbi.nlm.nih.gov/26869916"},"language":"en","primary_location":{"id":"doi:10.3389/fninf.2016.00002","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2016.00002","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2016.00002/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fninf.2016.00002/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035946087","display_name":"Mary K. Askren","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mary K. Askren","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038667076","display_name":"Trevor K. M. Day","orcid":"https://orcid.org/0000-0003-2911-8312"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Trevor K. McAllister-Day","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072091486","display_name":"Natalie Koh","orcid":"https://orcid.org/0000-0001-8904-4568"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Natalie Koh","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086061142","display_name":"Zo\u00e9 Mestre","orcid":"https://orcid.org/0000-0002-1244-3162"},"institutions":[{"id":"https://openalex.org/I26538001","display_name":"San Diego State University","ror":"https://ror.org/0264fdx42","country_code":"US","type":"education","lineage":["https://openalex.org/I26538001"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zo\u00e9 Mestre","raw_affiliation_strings":["Department of Clinical Psychology, University of California, San Diego/San Diego State University San Diego, CA, USA","Department of Clinical Psychology, University of California, San Diego/San Diego State University, San Diego, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Psychology, University of California, San Diego/San Diego State University San Diego, CA, USA","institution_ids":["https://openalex.org/I26538001"]},{"raw_affiliation_string":"Department of Clinical Psychology, University of California, San Diego/San Diego State University, San Diego, CA, USA","institution_ids":["https://openalex.org/I26538001","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083533111","display_name":"Jennifer N. Dines","orcid":"https://orcid.org/0000-0003-1649-2006"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer N. Dines","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080753001","display_name":"Benjamin A. Korman","orcid":"https://orcid.org/0000-0001-9686-5399"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin A. Korman","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014146374","display_name":"Susan J. Melhorn","orcid":"https://orcid.org/0000-0001-7969-8496"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan J. Melhorn","raw_affiliation_strings":["Department of Medicine, University of Washington Seattle, WA, USA","Department of Medicine, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Medicine, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033458976","display_name":"Daniel J. Peterson","orcid":"https://orcid.org/0000-0002-3979-3859"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Peterson","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046448161","display_name":"Matthew Peverill","orcid":"https://orcid.org/0000-0002-8257-1004"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Peverill","raw_affiliation_strings":["Department of Psychology, University of Washington Seattle, WA, USA","Department of Psychology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Psychology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101414245","display_name":"Xiaoyan Qin","orcid":"https://orcid.org/0009-0009-0820-8694"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaoyan Qin","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014626045","display_name":"Swati Rane Levendovszky","orcid":"https://orcid.org/0000-0001-8863-3168"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Swati D. Rane","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087379357","display_name":"Melissa Reilly","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melissa A. Reilly","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Maya A. Reiter","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maya A. Reiter","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043640081","display_name":"Kelly Sambrook","orcid":"https://orcid.org/0000-0003-1800-1143"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kelly A. Sambrook","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042782112","display_name":"Karl A. Woelfer","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Karl A. Woelfer","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046269953","display_name":"Thomas J. Grabowski","orcid":"https://orcid.org/0000-0002-7425-6610"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas J. Grabowski","raw_affiliation_strings":["Department of Radiology, University of WashingtonSeattle, WA, USA; Department of Neurology, University of WashingtonSeattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA","Department of Neurology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of WashingtonSeattle, WA, USA; Department of Neurology, University of WashingtonSeattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Neurology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062209759","display_name":"Tara Madhyastha","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tara M. Madhyastha","raw_affiliation_strings":["Department of Radiology, University of Washington Seattle, WA, USA","Department of Radiology, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Washington Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Radiology, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":17,"corresponding_author_ids":["https://openalex.org/A5035946087"],"corresponding_institution_ids":["https://openalex.org/I201448701"],"apc_list":{"value":2950,"currency":"USD","value_usd":2950},"apc_paid":{"value":2950,"currency":"USD","value_usd":2950},"fwci":16.1111,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.98586184,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"10","issue":null,"first_page":"2","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12026","display_name":"Explainable Artificial Intelligence (XAI)","score":0.9763000011444092,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10206","display_name":"Meta-analysis and systematic reviews","score":0.9535999894142151,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8510258197784424},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8332166075706482},{"id":"https://openalex.org/keywords/debugging","display_name":"Debugging","score":0.7432125806808472},{"id":"https://openalex.org/keywords/executable","display_name":"Executable","score":0.7397539615631104},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.6815612316131592},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.6327177286148071},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6138271689414978},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.5878936648368835},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.5481489300727844},{"id":"https://openalex.org/keywords/quality-assurance","display_name":"Quality assurance","score":0.4754747450351715},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4351273775100708},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4265679121017456},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3338168263435364},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.20465734601020813}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8510258197784424},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8332166075706482},{"id":"https://openalex.org/C168065819","wikidata":"https://www.wikidata.org/wiki/Q845566","display_name":"Debugging","level":2,"score":0.7432125806808472},{"id":"https://openalex.org/C160145156","wikidata":"https://www.wikidata.org/wiki/Q778586","display_name":"Executable","level":2,"score":0.7397539615631104},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.6815612316131592},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.6327177286148071},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6138271689414978},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.5878936648368835},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.5481489300727844},{"id":"https://openalex.org/C106436119","wikidata":"https://www.wikidata.org/wiki/Q836575","display_name":"Quality assurance","level":3,"score":0.4754747450351715},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4351273775100708},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4265679121017456},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3338168263435364},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.20465734601020813},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.0},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fninf.2016.00002","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2016.00002","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2016.00002/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:26869916","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26869916","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in neuroinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:8743eba0560c4e92ad3ba16b03d3b033","is_oa":true,"landing_page_url":"https://doaj.org/article/8743eba0560c4e92ad3ba16b03d3b033","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Neuroinformatics, Vol 10 (2016)","raw_type":"article"},{"id":"pmh:oai:kops.uni-konstanz.de:123456789/53671","is_oa":false,"landing_page_url":"http://nbn-resolving.de/urn:nbn:de:bsz:352-2-1dkruvziqus3v3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401487","display_name":"KOPS (University of Konstanz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189712700","host_organization_name":"University of Konstanz","host_organization_lineage":["https://openalex.org/I189712700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in neuroinformatics. Frontiers Research Foundation. 2016, 10, 00002. eISSN 1662-5196. Available under: doi: 10.3389/fninf.2016.00002","raw_type":"doc-type:Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4735413","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4735413","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Neuroinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fninf.2016.00002","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2016.00002","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2016.00002/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5199999809265137,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G1545846141","display_name":null,"funder_award_id":"P50HD071764","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"},{"id":"https://openalex.org/G2056762023","display_name":null,"funder_award_id":"P50NS062684","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G310714682","display_name":null,"funder_award_id":"1RC4NS073008-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8204160562","display_name":null,"funder_award_id":"P50HD071764","funder_id":"https://openalex.org/F4320337364","funder_display_name":"National Institute of Child Health and Human Development"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"},{"id":"https://openalex.org/F4320337364","display_name":"National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2277533176.pdf","grobid_xml":"https://content.openalex.org/works/W2277533176.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W2449283","https://openalex.org/W1514026819","https://openalex.org/W1897139626","https://openalex.org/W1993785488","https://openalex.org/W2004428985","https://openalex.org/W2008985174","https://openalex.org/W2053239079","https://openalex.org/W2069529061","https://openalex.org/W2084097533","https://openalex.org/W2110417468","https://openalex.org/W2113619522","https://openalex.org/W2117981173","https://openalex.org/W2143964357","https://openalex.org/W2148238464","https://openalex.org/W2150870182","https://openalex.org/W2275403358","https://openalex.org/W2916392783","https://openalex.org/W4285719527","https://openalex.org/W6630813498","https://openalex.org/W6734534431"],"related_works":["https://openalex.org/W4321442002","https://openalex.org/W2015265939","https://openalex.org/W2350278424","https://openalex.org/W2284072287","https://openalex.org/W2611067230","https://openalex.org/W2071432835","https://openalex.org/W2155788121","https://openalex.org/W3030873103","https://openalex.org/W4254242184","https://openalex.org/W4389880420"],"abstract_inverted_index":{"The":[0],"contribution":[1],"of":[2,35,40,43,94,97,169],"this":[3],"paper":[4,181],"is":[5],"to":[6,24,67,81,143,159,165,202],"describe":[7],"how":[8,23],"we":[9,90],"can":[10,91],"program":[11],"neuroimaging":[12,100,148],"workflow":[13],"using":[14,88],"Make,":[15],"a":[16,33,41,69,117,125,151,183],"software":[17],"development":[18],"tool":[19],"designed":[20],"for":[21,37],"describing":[22],"build":[25],"executables":[26],"from":[27,79],"source":[28],"files.":[29],"A":[30],"makefile":[31],"(or":[32],"file":[34],"instructions":[36],"Make)":[38],"consists":[39],"set":[42],"rules":[44,64],"that":[45,74,87,114],"create":[46,68],"or":[47,164],"update":[48],"target":[49],"files":[50],"if":[51],"they":[52],"have":[53],"not":[54],"been":[55],"modified":[56,158],"since":[57],"their":[58],"dependencies":[59],"were":[60],"last":[61],"modified.":[62],"These":[63],"are":[65,156,208],"processed":[66],"directed":[70],"acyclic":[71],"dependency":[72],"graph":[73],"allows":[75],"multiple":[76],"entry":[77],"points":[78],"which":[80],"execute":[82],"the":[83,95,137,167,175,204,211],"workflow.":[84],"We":[85,112],"show":[86],"Make":[89,115],"achieve":[92],"many":[93],"features":[96,122],"more":[98],"sophisticated":[99],"pipeline":[101],"systems,":[102],"including":[103],"reproducibility,":[104],"parallelization,":[105],"fault":[106],"tolerance,":[107],"and":[108,140,146,173,190,195,199,206],"quality":[109],"assurance":[110],"reports.":[111],"suggest":[113],"permits":[116],"large":[118],"step":[119],"toward":[120],"these":[121],"with":[123,187],"only":[124],"modest":[126],"increase":[127],"in":[128,150,210],"programming":[129],"demands":[130],"over":[131],"shell":[132],"scripts.":[133],"This":[134,180],"approach":[135],"reduces":[136],"technical":[138],"skill":[139],"time":[141],"required":[142],"write,":[144],"debug,":[145],"maintain":[147],"workflows":[149],"dynamic":[152],"environment,":[153],"where":[154,174],"pipelines":[155],"often":[157],"accommodate":[160],"new":[161],"best":[162],"practices":[163],"study":[166],"effect":[168],"alternative":[170],"preprocessing":[171],"steps,":[172],"underlying":[176],"packages":[177],"change":[178],"frequently.":[179],"has":[182],"comprehensive":[184],"accompanying":[185],"manual":[186],"lab":[188],"practicals":[189,205],"examples":[191,207],"(see":[192],"Supplemental":[193],"Materials)":[194],"all":[196],"data,":[197],"scripts,":[198],"makefiles":[200],"necessary":[201],"run":[203],"available":[209],"\"makepipelines\"":[212],"project":[213],"at":[214],"NITRC.":[215]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":4}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}