{"id":"https://openalex.org/W1983366858","doi":"https://doi.org/10.3389/fninf.2012.00011","title":"Visual Systems for Interactive Exploration and Mining of Large-Scale Neuroimaging Data Archives","display_name":"Visual Systems for Interactive Exploration and Mining of Large-Scale Neuroimaging Data Archives","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W1983366858","doi":"https://doi.org/10.3389/fninf.2012.00011","mag":"1983366858","pmid":"https://pubmed.ncbi.nlm.nih.gov/22536181"},"language":"en","primary_location":{"id":"doi:10.3389/fninf.2012.00011","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2012.00011","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2012.00011/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fninf.2012.00011/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072594625","display_name":"Ian Bowman","orcid":"https://orcid.org/0000-0001-7366-9192"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ian Bowman","raw_affiliation_strings":["Laboratory of Neuro Imaging, Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, CA, USA","Laboratory of Neuroimaging, University of California at Los Angeles, Neurology, Los Angeles, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Neuro Imaging, Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, CA, USA","institution_ids":[]},{"raw_affiliation_string":"Laboratory of Neuroimaging, University of California at Los Angeles, Neurology, Los Angeles, United States","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115590666","display_name":"Shantanu H. Joshi","orcid":"https://orcid.org/0000-0002-7292-8022"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shantanu H. Joshi","raw_affiliation_strings":["Laboratory of Neuroimaging, University of California at Los Angeles, Neurology, Los Angeles, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Neuroimaging, University of California at Los Angeles, Neurology, Los Angeles, United States","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085358934","display_name":"John D. Van Horn","orcid":"https://orcid.org/0000-0003-1537-0816"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John D. Van Horn","raw_affiliation_strings":["Laboratory of Neuroimaging, University of California at Los Angeles, Neurology, Los Angeles, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Neuroimaging, University of California at Los Angeles, Neurology, Los Angeles, United States","institution_ids":["https://openalex.org/I161318765"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5072594625"],"corresponding_institution_ids":["https://openalex.org/I161318765"],"apc_list":{"value":2950,"currency":"USD","value_usd":2950},"apc_paid":{"value":2950,"currency":"USD","value_usd":2950},"fwci":1.6645,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.8506005,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"6","issue":null,"first_page":"11","last_page":"11"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.6297817230224609},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6247662901878357},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5885642170906067},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5183835625648499},{"id":"https://openalex.org/keywords/visual-analytics","display_name":"Visual analytics","score":0.5105406045913696},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.45119521021842957},{"id":"https://openalex.org/keywords/interactive-visual-analysis","display_name":"Interactive visual analysis","score":0.4281367361545563},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.27417561411857605},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.16126322746276855},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.13290420174598694},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.10195061564445496},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.0974222719669342}],"concepts":[{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.6297817230224609},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6247662901878357},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5885642170906067},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5183835625648499},{"id":"https://openalex.org/C59732488","wikidata":"https://www.wikidata.org/wiki/Q2528440","display_name":"Visual analytics","level":3,"score":0.5105406045913696},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.45119521021842957},{"id":"https://openalex.org/C99740376","wikidata":"https://www.wikidata.org/wiki/Q17092520","display_name":"Interactive visual analysis","level":4,"score":0.4281367361545563},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.27417561411857605},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.16126322746276855},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.13290420174598694},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.10195061564445496},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0974222719669342}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fninf.2012.00011","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2012.00011","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2012.00011/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:22536181","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22536181","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in neuroinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:4450d417859243e9908287a2ce91cca6","is_oa":false,"landing_page_url":"https://doaj.org/article/4450d417859243e9908287a2ce91cca6","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Neuroinformatics, Vol 6 (2012)","raw_type":"article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt63x4n46n","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/63x4n46n","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Neuroinformatics, vol 6, iss MARCH","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2340558","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3332235","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fninf.2012.00011","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fninf.2012.00011","pdf_url":"https://www.frontiersin.org/articles/10.3389/fninf.2012.00011/pdf","source":{"id":"https://openalex.org/S179816892","display_name":"Frontiers in Neuroinformatics","issn_l":"1662-5196","issn":["1662-5196"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Neuroinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3630907223","display_name":null,"funder_award_id":"P41 RR013642","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1983366858.pdf","grobid_xml":"https://content.openalex.org/works/W1983366858.grobid-xml"},"referenced_works_count":77,"referenced_works":["https://openalex.org/W19097475","https://openalex.org/W46655187","https://openalex.org/W131918210","https://openalex.org/W655089096","https://openalex.org/W1503196035","https://openalex.org/W1507525820","https://openalex.org/W1584474385","https://openalex.org/W1600069255","https://openalex.org/W1965551074","https://openalex.org/W1966039278","https://openalex.org/W1970085768","https://openalex.org/W1977050089","https://openalex.org/W1981323832","https://openalex.org/W1981852940","https://openalex.org/W1985487562","https://openalex.org/W1987576501","https://openalex.org/W1993412785","https://openalex.org/W1994329769","https://openalex.org/W1995277044","https://openalex.org/W2001141328","https://openalex.org/W2003690991","https://openalex.org/W2004388578","https://openalex.org/W2017794330","https://openalex.org/W2039605938","https://openalex.org/W2043857376","https://openalex.org/W2052320679","https://openalex.org/W2062024414","https://openalex.org/W2065802146","https://openalex.org/W2071881327","https://openalex.org/W2078524519","https://openalex.org/W2096347908","https://openalex.org/W2096931656","https://openalex.org/W2098072631","https://openalex.org/W2103994377","https://openalex.org/W2104612543","https://openalex.org/W2114005694","https://openalex.org/W2115799070","https://openalex.org/W2121155062","https://openalex.org/W2125047311","https://openalex.org/W2126043693","https://openalex.org/W2131678497","https://openalex.org/W2132458496","https://openalex.org/W2133420504","https://openalex.org/W2134262590","https://openalex.org/W2143522330","https://openalex.org/W2145072179","https://openalex.org/W2146950091","https://openalex.org/W2150321679","https://openalex.org/W2151103935","https://openalex.org/W2151721316","https://openalex.org/W2158514158","https://openalex.org/W2162948416","https://openalex.org/W2170860445","https://openalex.org/W2171380313","https://openalex.org/W2319794630","https://openalex.org/W2414493750","https://openalex.org/W2489799469","https://openalex.org/W2582743722","https://openalex.org/W3104298728","https://openalex.org/W3142828467","https://openalex.org/W4246354968","https://openalex.org/W4249164391","https://openalex.org/W4254607142","https://openalex.org/W4294576732","https://openalex.org/W6601863487","https://openalex.org/W6629984606","https://openalex.org/W6641632649","https://openalex.org/W6647454092","https://openalex.org/W6648573353","https://openalex.org/W6665990373","https://openalex.org/W6668885906","https://openalex.org/W6679859286","https://openalex.org/W6681764063","https://openalex.org/W6682228772","https://openalex.org/W6785959367","https://openalex.org/W6828693573","https://openalex.org/W7047381192"],"related_works":["https://openalex.org/W348707231","https://openalex.org/W1558485007","https://openalex.org/W2064719069","https://openalex.org/W2067923524","https://openalex.org/W3004497735","https://openalex.org/W1873226627","https://openalex.org/W2911982569","https://openalex.org/W2362367986","https://openalex.org/W3041760129","https://openalex.org/W2571228289"],"abstract_inverted_index":{"While":[0],"technological":[1],"advancements":[2],"in":[3,35,41,105,154,199],"neuroimaging":[4,26,73,89,126,132],"scanner":[5],"engineering":[6],"have":[7],"improved":[8],"the":[9,22,46,53,69,77,85,94,177],"efficiency":[10],"of":[11,24,55,87,109,124,137,161,163,194],"data":[12,15,60,90,169,206],"acquisition,":[13],"electronic":[14,195],"capture":[16],"methods":[17],"will":[18],"likewise":[19],"significantly":[20],"expedite":[21],"populating":[23],"large-scale":[25,88],"databases.":[27],"As":[28,171],"they":[29],"do":[30],"and":[31,43,62,81,101,141,158,168,205],"these":[32,49],"archives":[33,198],"grow":[34],"size,":[36],"a":[37,107,121,130,135,155,185],"particular":[38],"challenge":[39],"lies":[40],"examining":[42,106,144],"interacting":[44],"with":[45,84,191],"information":[47],"that":[48],"resources":[50],"contain":[51],"through":[52],"development":[54],"compelling,":[56],"user-driven":[57],"approaches":[58],"for":[59,72,76,143,179,202],"exploration":[61],"mining.":[63,170,207],"In":[64],"this":[65],"article,":[66],"we":[67],"introduce":[68],"informatics":[70],"visualization":[71],"(INVIZIAN)":[74],"framework":[75],"graphical":[78],"rendering":[79],"of,":[80],"dynamic":[82],"interaction":[83],"contents":[86],"sets.":[91],"We":[92],"describe":[93],"rationale":[95],"behind":[96],"INVIZIAN,":[97],"detail":[98],"its":[99,103],"development,":[100],"demonstrate":[102],"usage":[104],"collection":[108,136],"over":[110],"900":[111],"T1-anatomical":[112],"magnetic":[113],"resonance":[114],"imaging":[115,197],"(MRI)":[116],"image":[117],"volumes":[118],"from":[119,129],"across":[120],"diverse":[122],"set":[123],"clinical":[125],"studies":[127],"drawn":[128],"leading":[131],"database.":[133],"Using":[134],"cortical":[138],"surface":[139],"metrics":[140],"means":[142,188],"brain":[145,150,196],"similarity,":[146],"INVIZIAN":[147,183],"graphically":[148],"displays":[149],"surfaces":[151],"as":[152],"points":[153],"coordinate":[156],"space":[157],"enables":[159],"classification":[160],"clusters":[162],"neuroanatomically":[164],"similar":[165],"MRI":[166],"images":[167],"an":[172],"initial":[173],"step":[174],"toward":[175],"addressing":[176],"need":[178],"such":[180],"user-friendly":[181],"tools,":[182],"provides":[184],"highly":[186],"unique":[187],"to":[189],"interact":[190],"large":[192],"quantities":[193],"ways":[200],"suitable":[201],"hypothesis":[203],"generation":[204]},"counts_by_year":[{"year":2021,"cited_by_count":12},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}