{"id":"https://openalex.org/W4390610516","doi":"https://doi.org/10.3389/fncom.2023.1323182","title":"Challenges and limitations in computational prediction of protein misfolding in neurodegenerative diseases","display_name":"Challenges and limitations in computational prediction of protein misfolding in neurodegenerative diseases","publication_year":2024,"publication_date":"2024-01-05","ids":{"openalex":"https://openalex.org/W4390610516","doi":"https://doi.org/10.3389/fncom.2023.1323182","pmid":"https://pubmed.ncbi.nlm.nih.gov/38250244"},"language":"en","primary_location":{"id":"doi:10.3389/fncom.2023.1323182","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fncom.2023.1323182","pdf_url":"https://www.frontiersin.org/articles/10.3389/fncom.2023.1323182/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S19778766","display_name":"Frontiers in Computational Neuroscience","issn_l":"1662-5188","issn":["1662-5188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Computational Neuroscience","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fncom.2023.1323182/pdf?isPublishedV2=False","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102713405","display_name":"Marios G. Krokidis","orcid":"https://orcid.org/0000-0002-7001-5078"},"institutions":[{"id":"https://openalex.org/I187792471","display_name":"Ionian University","ror":"https://ror.org/01xm4n520","country_code":"GR","type":"education","lineage":["https://openalex.org/I187792471"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Marios G. Krokidis","raw_affiliation_strings":["Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece","institution_ids":["https://openalex.org/I187792471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077147419","display_name":"Georgios \u039d. Dimitrakopoulos","orcid":"https://orcid.org/0000-0002-7817-9552"},"institutions":[{"id":"https://openalex.org/I187792471","display_name":"Ionian University","ror":"https://ror.org/01xm4n520","country_code":"GR","type":"education","lineage":["https://openalex.org/I187792471"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Georgios N. Dimitrakopoulos","raw_affiliation_strings":["Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece","institution_ids":["https://openalex.org/I187792471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082119404","display_name":"Aristidis G. Vrahatis","orcid":"https://orcid.org/0000-0003-1892-0000"},"institutions":[{"id":"https://openalex.org/I187792471","display_name":"Ionian University","ror":"https://ror.org/01xm4n520","country_code":"GR","type":"education","lineage":["https://openalex.org/I187792471"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Aristidis G. Vrahatis","raw_affiliation_strings":["Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece","institution_ids":["https://openalex.org/I187792471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104150275","display_name":"Themis P. Exarchos","orcid":null},"institutions":[{"id":"https://openalex.org/I187792471","display_name":"Ionian University","ror":"https://ror.org/01xm4n520","country_code":"GR","type":"education","lineage":["https://openalex.org/I187792471"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Themis P. Exarchos","raw_affiliation_strings":["Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece","institution_ids":["https://openalex.org/I187792471"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002406655","display_name":"Panagiotis Vlamos","orcid":"https://orcid.org/0000-0003-0053-7847"},"institutions":[{"id":"https://openalex.org/I187792471","display_name":"Ionian University","ror":"https://ror.org/01xm4n520","country_code":"GR","type":"education","lineage":["https://openalex.org/I187792471"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Panagiotis Vlamos","raw_affiliation_strings":["Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece","institution_ids":["https://openalex.org/I187792471"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5002406655"],"corresponding_institution_ids":["https://openalex.org/I187792471"],"apc_list":{"value":3295,"currency":"USD","value_usd":3295},"apc_paid":{"value":3295,"currency":"USD","value_usd":3295},"fwci":1.4728,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.8040668,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"17","issue":null,"first_page":"1323182","last_page":"1323182"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.5406455993652344},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44146183133125305},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4349025785923004},{"id":"https://openalex.org/keywords/protein-folding","display_name":"Protein folding","score":0.4347218871116638},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3067997992038727},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.11125656962394714}],"concepts":[{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.5406455993652344},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44146183133125305},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4349025785923004},{"id":"https://openalex.org/C204328495","wikidata":"https://www.wikidata.org/wiki/Q847556","display_name":"Protein folding","level":2,"score":0.4347218871116638},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3067997992038727},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.11125656962394714}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fncom.2023.1323182","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fncom.2023.1323182","pdf_url":"https://www.frontiersin.org/articles/10.3389/fncom.2023.1323182/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S19778766","display_name":"Frontiers in Computational Neuroscience","issn_l":"1662-5188","issn":["1662-5188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Computational Neuroscience","raw_type":"journal-article"},{"id":"pmid:38250244","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38250244","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in computational neuroscience","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10796696","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10796696","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10796696/pdf/fncom-17-1323182.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Comput Neurosci","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:0c60e4b012864ca099752bc301e8f04e","is_oa":true,"landing_page_url":"https://doaj.org/article/0c60e4b012864ca099752bc301e8f04e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Computational Neuroscience, Vol 17 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fncom.2023.1323182","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fncom.2023.1323182","pdf_url":"https://www.frontiersin.org/articles/10.3389/fncom.2023.1323182/pdf?isPublishedV2=False","source":{"id":"https://openalex.org/S19778766","display_name":"Frontiers in Computational Neuroscience","issn_l":"1662-5188","issn":["1662-5188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Computational Neuroscience","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.41999998688697815,"id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4390610516.pdf"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W1607931568","https://openalex.org/W1992830187","https://openalex.org/W1997820716","https://openalex.org/W2045777307","https://openalex.org/W2081763325","https://openalex.org/W2106639656","https://openalex.org/W2129020329","https://openalex.org/W2130303726","https://openalex.org/W2134143754","https://openalex.org/W2146491495","https://openalex.org/W2159847394","https://openalex.org/W2171755502","https://openalex.org/W2401818773","https://openalex.org/W2595891670","https://openalex.org/W2807767616","https://openalex.org/W2952317511","https://openalex.org/W2967606876","https://openalex.org/W2998620327","https://openalex.org/W2999044305","https://openalex.org/W3000982932","https://openalex.org/W3008186720","https://openalex.org/W3088578860","https://openalex.org/W3100571307","https://openalex.org/W3162614523","https://openalex.org/W3163965514","https://openalex.org/W3165545667","https://openalex.org/W3177828909","https://openalex.org/W3186179742","https://openalex.org/W4200013470","https://openalex.org/W4205161581","https://openalex.org/W4211196614","https://openalex.org/W4220728003","https://openalex.org/W4220898475","https://openalex.org/W4280569813","https://openalex.org/W4281291878","https://openalex.org/W4282920722","https://openalex.org/W4289544619","https://openalex.org/W4293109689","https://openalex.org/W4294719209","https://openalex.org/W4295107433","https://openalex.org/W4296032638","https://openalex.org/W4296293027","https://openalex.org/W4300861364","https://openalex.org/W4304789266","https://openalex.org/W4306888844","https://openalex.org/W4308119366","https://openalex.org/W4311392616","https://openalex.org/W4313654640","https://openalex.org/W4321019178","https://openalex.org/W4323309784","https://openalex.org/W4327550249","https://openalex.org/W4377097042","https://openalex.org/W4380551816","https://openalex.org/W4383216409","https://openalex.org/W4386328074","https://openalex.org/W4386965525","https://openalex.org/W4387535142","https://openalex.org/W4388573959"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2151865869","https://openalex.org/W2117258802"],"abstract_inverted_index":{"OPINION":[0],"article":[1],"Front.":[2],"Comput.":[3],"Neurosci.,":[4],"05":[5],"January":[6],"2024":[7],"Volume":[8],"17":[9],"-":[10],"2023":[11],"|":[12],"https://doi.org/10.3389/fncom.2023.1323182":[13]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2}],"updated_date":"2026-07-25T15:57:00.446498","created_date":"2025-10-10T00:00:00"}
