{"id":"https://openalex.org/W4406906295","doi":"https://doi.org/10.3389/fdgth.2025.1423621","title":"Harmonizing population health data into OMOP common data model: a demonstration using COVID-19 sero-surveillance data from Nairobi Urban Health and Demographic Surveillance System","display_name":"Harmonizing population health data into OMOP common data model: a demonstration using COVID-19 sero-surveillance data from Nairobi Urban Health and Demographic Surveillance System","publication_year":2025,"publication_date":"2025-01-28","ids":{"openalex":"https://openalex.org/W4406906295","doi":"https://doi.org/10.3389/fdgth.2025.1423621","pmid":"https://pubmed.ncbi.nlm.nih.gov/39949611"},"language":"en","primary_location":{"id":"doi:10.3389/fdgth.2025.1423621","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fdgth.2025.1423621","pdf_url":null,"source":{"id":"https://openalex.org/S4210170686","display_name":"Frontiers in Digital Health","issn_l":"2673-253X","issn":["2673-253X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Digital Health","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3389/fdgth.2025.1423621","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5093813101","display_name":"Michael Ochola","orcid":"https://orcid.org/0000-0001-9081-3360"},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Michael Ochola","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078088172","display_name":"Sylvia Kiwuwa-Muyingo","orcid":"https://orcid.org/0000-0002-9978-5690"},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":true,"raw_author_name":"Sylvia Kiwuwa-Muyingo","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036960872","display_name":"Tathagata Bhattacharjee","orcid":"https://orcid.org/0000-0001-9437-0894"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I4210089966","display_name":"London School of Hygiene & Tropical Medicine","ror":"https://ror.org/00a0jsq62","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tathagata Bhattacharjee","raw_affiliation_strings":["Department of Population Health, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Department of Population Health, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092031559","display_name":"David Amadi","orcid":"https://orcid.org/0000-0001-6814-4439"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I4210089966","display_name":"London School of Hygiene & Tropical Medicine","ror":"https://ror.org/00a0jsq62","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Amadi","raw_affiliation_strings":["Department of Population Health, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Department of Population Health, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061015917","display_name":"Maureen Ng\u2019etich","orcid":"https://orcid.org/0009-0007-4945-4635"},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Maureen Ng\u2019etich","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033311233","display_name":"Damazo T. Kadengye","orcid":"https://orcid.org/0000-0001-7586-4928"},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Damazo Kadengye","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093274244","display_name":"Henry Owoko Odero","orcid":"https://orcid.org/0000-0002-3678-4332"},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Henry Owoko","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116061283","display_name":"Boniface Igumba","orcid":null},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Boniface Igumba","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033169371","display_name":"Jay Greenfield","orcid":"https://orcid.org/0000-0003-2773-5317"},"institutions":[{"id":"https://openalex.org/I4210128065","display_name":"International Science Council","ror":"https://ror.org/034s44556","country_code":"FR","type":"funder","lineage":["https://openalex.org/I4210128065"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jay Greenfield","raw_affiliation_strings":["Machine Learning (AI and ML), Committee on Data of the International Science Council (CODATA), Paris, France"],"affiliations":[{"raw_affiliation_string":"Machine Learning (AI and ML), Committee on Data of the International Science Council (CODATA), Paris, France","institution_ids":["https://openalex.org/I4210128065"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075734443","display_name":"Jim Todd","orcid":"https://orcid.org/0000-0001-5918-4914"},"institutions":[{"id":"https://openalex.org/I4210089966","display_name":"London School of Hygiene & Tropical Medicine","ror":"https://ror.org/00a0jsq62","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]},{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jim Todd","raw_affiliation_strings":["Department of Population Health, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Department of Population Health, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042934531","display_name":"Agnes Kiragga","orcid":"https://orcid.org/0000-0002-0969-0699"},"institutions":[{"id":"https://openalex.org/I4210129448","display_name":"African Population and Health Research Center","ror":"https://ror.org/032ztsj35","country_code":"KE","type":"healthcare","lineage":["https://openalex.org/I4210129448"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Agnes Kiragga","raw_affiliation_strings":["Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","Implementation Network for Sharing Population Information from Research Entities (INSPIRE Network), Nairobi, Kenya"],"affiliations":[{"raw_affiliation_string":"Data Science Program, African Population and Health Research Center (APHRC), Nairobi, Kenya","institution_ids":["https://openalex.org/I4210129448"]},{"raw_affiliation_string":"Implementation Network for Sharing Population Information from Research Entities (INSPIRE Network), Nairobi, Kenya","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5078088172"],"corresponding_institution_ids":["https://openalex.org/I4210129448"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":5.5711,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.9449528,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"7","issue":null,"first_page":"1423621","last_page":"1423621"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11396","display_name":"Artificial Intelligence in Healthcare","score":0.9871000051498413,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11819","display_name":"Data-Driven Disease Surveillance","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/observational-study","display_name":"Observational study","score":0.6845346689224243},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47514939308166504},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4577540159225464},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.4562155306339264},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38157349824905396},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3372122645378113},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.26954132318496704},{"id":"https://openalex.org/keywords/environmental-health","display_name":"Environmental health","score":0.1979123055934906}],"concepts":[{"id":"https://openalex.org/C23131810","wikidata":"https://www.wikidata.org/wiki/Q818574","display_name":"Observational study","level":2,"score":0.6845346689224243},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47514939308166504},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4577540159225464},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4562155306339264},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38157349824905396},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3372122645378113},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.26954132318496704},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.1979123055934906},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fdgth.2025.1423621","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fdgth.2025.1423621","pdf_url":null,"source":{"id":"https://openalex.org/S4210170686","display_name":"Frontiers in Digital Health","issn_l":"2673-253X","issn":["2673-253X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Digital Health","raw_type":"journal-article"},{"id":"pmid:39949611","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39949611","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in digital health","raw_type":null},{"id":"pmh:oai:researchonline.lshtm.ac.uk:4674944","is_oa":false,"landing_page_url":"https://orcid.org/0000-0001-9437-0894>;","pdf_url":null,"source":{"id":"https://openalex.org/S4306402527","display_name":"LSHTM Research Online (London School of Hygiene and Tropical Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210089966","host_organization_name":"London School of Hygiene & Tropical Medicine","host_organization_lineage":["https://openalex.org/I4210089966"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:11822943","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11822943","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Digit Health","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:400363d8387344a0931650d5d16f6bd4","is_oa":true,"landing_page_url":"https://doaj.org/article/400363d8387344a0931650d5d16f6bd4","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Digital Health, Vol 7 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fdgth.2025.1423621","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fdgth.2025.1423621","pdf_url":null,"source":{"id":"https://openalex.org/S4210170686","display_name":"Frontiers in Digital Health","issn_l":"2673-253X","issn":["2673-253X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Digital Health","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.49000000953674316,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W2020891651","https://openalex.org/W2304359685","https://openalex.org/W2518786827","https://openalex.org/W2755562077","https://openalex.org/W2784358526","https://openalex.org/W2958057146","https://openalex.org/W3139465892","https://openalex.org/W3210129127","https://openalex.org/W4206907874","https://openalex.org/W4225867564","https://openalex.org/W4281735080","https://openalex.org/W4291143774","https://openalex.org/W4293067519","https://openalex.org/W4304588233","https://openalex.org/W4380077406"],"related_works":["https://openalex.org/W4381328000","https://openalex.org/W2109147503","https://openalex.org/W2103779230","https://openalex.org/W2911339178","https://openalex.org/W334096847","https://openalex.org/W2322581019","https://openalex.org/W3141050733","https://openalex.org/W2030936866","https://openalex.org/W1533309927","https://openalex.org/W3141550469"],"abstract_inverted_index":{"The":[0],"OMOP":[1,14],"CDM":[2,15],"is":[3],"a":[4,27],"valuable":[5],"tool":[6],"for":[7],"harmonizing":[8],"observational":[9,22],"health":[10,23,39],"data.":[11],"Using":[12],"the":[13,17],"facilitates":[16],"sharing":[18],"and":[19,33,35],"analysis":[20],"of":[21,30],"data,":[24],"leading":[25],"to":[26],"better":[28],"understanding":[29],"disease":[31],"conditions":[32],"trends":[34],"improving":[36],"evidence-based":[37],"population":[38],"strategies.":[40]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
