{"id":"https://openalex.org/W3132087365","doi":"https://doi.org/10.3389/fdata.2021.582468","title":"Named Data Networking for Genomics Data Management and Integrated Workflows","display_name":"Named Data Networking for Genomics Data Management and Integrated Workflows","publication_year":2021,"publication_date":"2021-02-15","ids":{"openalex":"https://openalex.org/W3132087365","doi":"https://doi.org/10.3389/fdata.2021.582468","mag":"3132087365","pmid":"https://pubmed.ncbi.nlm.nih.gov/33748749"},"language":"en","primary_location":{"id":"doi:10.3389/fdata.2021.582468","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fdata.2021.582468","pdf_url":"https://www.frontiersin.org/articles/10.3389/fdata.2021.582468/pdf","source":{"id":"https://openalex.org/S4210201220","display_name":"Frontiers in Big Data","issn_l":"2624-909X","issn":["2624-909X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Big Data","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fdata.2021.582468/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042450814","display_name":"Cameron Ogle","orcid":"https://orcid.org/0009-0001-1114-6094"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cameron Ogle","raw_affiliation_strings":["School of Computing, Clemson University, Clemson, SC, United States"],"affiliations":[{"raw_affiliation_string":"School of Computing, Clemson University, Clemson, SC, United States","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022191122","display_name":"David Reddick","orcid":"https://orcid.org/0000-0002-0684-5915"},"institutions":[{"id":"https://openalex.org/I63920570","display_name":"Tennessee Technological University","ror":"https://ror.org/05drmrq39","country_code":"US","type":"education","lineage":["https://openalex.org/I63920570"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Reddick","raw_affiliation_strings":["Department of Computer Science, Tennessee Tech University, Cookeville, TN, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Tennessee Tech University, Cookeville, TN, United States","institution_ids":["https://openalex.org/I63920570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013477756","display_name":"Coleman B. McKnight","orcid":null},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Coleman McKnight","raw_affiliation_strings":["Department of Genetics and Biochemistry, Clemson University, Clemson, SC, United States"],"affiliations":[{"raw_affiliation_string":"Department of Genetics and Biochemistry, Clemson University, Clemson, SC, United States","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059972300","display_name":"Tyler D. Biggs","orcid":null},"institutions":[{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tyler Biggs","raw_affiliation_strings":["Department of Horticulture, Washington State University, Pullman, WA, United States"],"affiliations":[{"raw_affiliation_string":"Department of Horticulture, Washington State University, Pullman, WA, United States","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030673145","display_name":"Rini Pauly","orcid":"https://orcid.org/0000-0002-0664-9308"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rini Pauly","raw_affiliation_strings":["Biomedical Data Science and Informatics Program, Clemson, SC, United States"],"affiliations":[{"raw_affiliation_string":"Biomedical Data Science and Informatics Program, Clemson, SC, United States","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015114586","display_name":"Stephen Ficklin","orcid":"https://orcid.org/0000-0001-9138-6292"},"institutions":[{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen P. Ficklin","raw_affiliation_strings":["Department of Horticulture, Washington State University, Pullman, WA, United States"],"affiliations":[{"raw_affiliation_string":"Department of Horticulture, Washington State University, Pullman, WA, United States","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021360029","display_name":"F. Alex Feltus","orcid":null},"institutions":[{"id":"https://openalex.org/I4210149064","display_name":"Greenwood Genetic Center","ror":"https://ror.org/03p64mj41","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210149064"]},{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I4210105714","display_name":"Center for Human Genetics","ror":"https://ror.org/01gcrbc43","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210105714"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"F. Alex Feltus","raw_affiliation_strings":["Biomedical Data Science and Informatics Program, Clemson, SC, United States","Center for Human Genetics, Clemson University, Greenwood, SC, United States","Department of Genetics and Biochemistry, Clemson University, Clemson, SC, United States"],"affiliations":[{"raw_affiliation_string":"Biomedical Data Science and Informatics Program, Clemson, SC, United States","institution_ids":["https://openalex.org/I8078737"]},{"raw_affiliation_string":"Center for Human Genetics, Clemson University, Greenwood, SC, United States","institution_ids":["https://openalex.org/I4210149064","https://openalex.org/I8078737","https://openalex.org/I4210105714"]},{"raw_affiliation_string":"Department of Genetics and Biochemistry, Clemson University, Clemson, SC, United States","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013575880","display_name":"Susmit Shannigrahi","orcid":"https://orcid.org/0000-0001-6213-7473"},"institutions":[{"id":"https://openalex.org/I63920570","display_name":"Tennessee Technological University","ror":"https://ror.org/05drmrq39","country_code":"US","type":"education","lineage":["https://openalex.org/I63920570"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Susmit Shannigrahi","raw_affiliation_strings":["Department of Computer Science, Tennessee Tech University, Cookeville, TN, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Tennessee Tech University, Cookeville, TN, United States","institution_ids":["https://openalex.org/I63920570"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5013575880"],"corresponding_institution_ids":["https://openalex.org/I63920570"],"apc_list":{"value":1150,"currency":"USD","value_usd":1150},"apc_paid":{"value":1150,"currency":"USD","value_usd":1150},"fwci":0.9169,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.75004595,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"4","issue":null,"first_page":"582468","last_page":"582468"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11478","display_name":"Caching and Content Delivery","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11478","display_name":"Caching and Content Delivery","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10796","display_name":"Cooperative Communication and Network Coding","score":0.9811000227928162,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9588000178337097,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/petabyte","display_name":"Petabyte","score":0.8230750560760498},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7608585357666016},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7124533653259277},{"id":"https://openalex.org/keywords/terabyte","display_name":"Terabyte","score":0.6861028671264648},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.5647678375244141},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.47801053524017334},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.46748417615890503},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.4406556487083435},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.43599486351013184},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.41190651059150696},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3828217089176178},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.29442912340164185},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.27433696389198303},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2677474021911621},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.19313830137252808}],"concepts":[{"id":"https://openalex.org/C13600138","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Petabyte","level":3,"score":0.8230750560760498},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7608585357666016},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7124533653259277},{"id":"https://openalex.org/C199683683","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Terabyte","level":2,"score":0.6861028671264648},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.5647678375244141},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.47801053524017334},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.46748417615890503},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.4406556487083435},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.43599486351013184},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.41190651059150696},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3828217089176178},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.29442912340164185},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.27433696389198303},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2677474021911621},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.19313830137252808},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fdata.2021.582468","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fdata.2021.582468","pdf_url":"https://www.frontiersin.org/articles/10.3389/fdata.2021.582468/pdf","source":{"id":"https://openalex.org/S4210201220","display_name":"Frontiers in Big Data","issn_l":"2624-909X","issn":["2624-909X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Big Data","raw_type":"journal-article"},{"id":"pmid:33748749","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33748749","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in big data","raw_type":null},{"id":"pmh:oai:doaj.org/article:95cc455b41bb42f69de9c301dcda8788","is_oa":true,"landing_page_url":"https://doaj.org/article/95cc455b41bb42f69de9c301dcda8788","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Big Data, Vol 4 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7968724","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7968724","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Big Data","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fdata.2021.582468","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fdata.2021.582468","pdf_url":"https://www.frontiersin.org/articles/10.3389/fdata.2021.582468/pdf","source":{"id":"https://openalex.org/S4210201220","display_name":"Frontiers in Big Data","issn_l":"2624-909X","issn":["2624-909X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Big Data","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.6200000047683716}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320319572","display_name":"Tennessee Tech University","ror":"https://ror.org/05drmrq39"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3132087365.pdf","grobid_xml":"https://content.openalex.org/works/W3132087365.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W1490161904","https://openalex.org/W1963311772","https://openalex.org/W2013486114","https://openalex.org/W2021235830","https://openalex.org/W2030448197","https://openalex.org/W2042539274","https://openalex.org/W2050616093","https://openalex.org/W2094335965","https://openalex.org/W2096525273","https://openalex.org/W2104846587","https://openalex.org/W2117608012","https://openalex.org/W2123171788","https://openalex.org/W2140174214","https://openalex.org/W2155903900","https://openalex.org/W2159092541","https://openalex.org/W2178932184","https://openalex.org/W2189948602","https://openalex.org/W2286261512","https://openalex.org/W2463997949","https://openalex.org/W2605897695","https://openalex.org/W2623443302","https://openalex.org/W2742474178","https://openalex.org/W2783035651","https://openalex.org/W2803692993","https://openalex.org/W2818001250","https://openalex.org/W2903458588","https://openalex.org/W2916836301","https://openalex.org/W2921895833","https://openalex.org/W2943017635","https://openalex.org/W2949393942","https://openalex.org/W2981548924","https://openalex.org/W2983817879","https://openalex.org/W3008283206","https://openalex.org/W4211046286","https://openalex.org/W4248735723","https://openalex.org/W4250359879","https://openalex.org/W4298068285","https://openalex.org/W6657955557","https://openalex.org/W6661198176","https://openalex.org/W6673712567","https://openalex.org/W6674952988","https://openalex.org/W6685434962","https://openalex.org/W6686127269","https://openalex.org/W6893785989","https://openalex.org/W7066110932"],"related_works":["https://openalex.org/W1538652242","https://openalex.org/W2011521129","https://openalex.org/W2461968736","https://openalex.org/W4386544342","https://openalex.org/W4379164835","https://openalex.org/W1971438544","https://openalex.org/W4390503034","https://openalex.org/W2034909456","https://openalex.org/W2481053450","https://openalex.org/W2514911858"],"abstract_inverted_index":{"Advanced":[0],"imaging":[1],"and":[2,15,59,117,172,185,217,241,249,279,294,328,361,407,431,436],"DNA":[3,43,107],"sequencing":[4],"technologies":[5],"now":[6],"enable":[7],"the":[8,29,38,54,87,128,132,155,187,219,268,272,296,310,326,342,348,384,394,404,414],"diverse":[9],"biology":[10],"community":[11,24,220,274,327,406],"to":[12,166,180,221,333,400,403],"routinely":[13],"generate":[14],"analyze":[16],"terabytes":[17],"of":[18,50,57,65,73,110,131,150,214,231,251,271,396,425],"high":[19],"resolution":[20],"biological":[21,51,67],"data.":[22,52],"The":[23,71,298,389],"is":[25,69,148,399],"rapidly":[26],"heading":[27],"toward":[28],"petascale":[30],"in":[31,86,92,96,259,285,306,330,366,375,441],"single":[32,39],"investigator":[33],"laboratory":[34],"settings.":[35],"As":[36,313],"evidence,":[37],"NCBI":[40,343],"SRA":[41],"central":[42],"sequence":[44],"repository":[45],"contains":[46],"over":[47,359],"45":[48],"petabytes":[49],"Given":[53],"geometric":[55],"growth":[56],"this":[58,121,260,397],"other":[60],"genomics":[61,133,202,273,291,405,415],"repositories,":[62,233],"an":[63,319,421],"exabyte":[64],"mineable":[66],"data":[68,167,197,205,209,239,307,335,339],"imminent.":[70],"challenges":[72,130,153,270],"effectively":[74],"utilizing":[75],"these":[76,152,352],"datasets":[77],"are":[78,82,178,262,427],"enormous":[79],"as":[80,100,163,228,263,383],"they":[81],"not":[83,419],"only":[84],"large":[85],"size":[88],"but":[89,144],"also":[90,246],"stored":[91],"geographically":[93],"distributed":[94],"repositories":[95,98,340],"various":[97,254],"such":[99,162,227,382],"National":[101],"Center":[102],"for":[103,189,196,201,288],"Biotechnology":[104],"Information":[105],"(NCBI),":[106],"Data":[108,139],"Bank":[109],"Japan":[111],"(DDBJ),":[112],"European":[113],"Bioinformatics":[114],"Institute":[115],"(EBI),":[116],"NASA's":[118],"GeneLab.":[119],"In":[120],"work,":[122],"we":[123,266,281,316,370],"first":[124],"systematically":[125],"point":[126],"out":[127],"data-management":[129],"community.":[134,416],"We":[135,345,417],"then":[136],"introduce":[137,401],"Named":[138,243],"Networking":[140],"(NDN),":[141],"a":[142,190,289,302,314,442],"novel":[143],"well-researched":[145],"Internet":[146],"architecture,":[147],"capable":[149],"solving":[151],"at":[154],"network":[156],"layer.":[157],"NDN":[158,200,276,287,320,349,360,377,402],"performs":[159],"all":[160],"operations":[161,226,245],"forwarding":[164],"requests":[165],"sources,":[168,237],"content":[169,175,232],"discovery,":[170,206],"access,":[171],"retrieval":[173,210,234],"using":[174,211],"names":[176],"(that":[177],"similar":[179],"traditional":[181],"filenames":[182],"or":[183],"filepaths)":[184],"eliminates":[186],"need":[188],"location":[191],"layer":[192],"(the":[193],"IP":[194],"address)":[195],"management.":[198],"Utilizing":[199],"workflows":[203,252],"simplifies":[204],"speeds":[207],"up":[208,305],"in-network":[212],"caching":[213],"popular":[215],"datasets,":[216],"allows":[218],"create":[222],"infrastructure":[223],"that":[224,275,355,393,411],"supports":[225],"creating":[229],"federation":[230],"from":[235,336],"multiple":[236],"remote":[238],"subsetting,":[240],"others.":[242],"based":[244],"streamlines":[247],"deployment":[248,435],"integration":[250],"with":[253,351,378],"cloud":[255,379],"platforms.":[256],"Our":[257],"contributions":[258],"work":[261],"follows":[264],"1)":[265],"enumerate":[267],"cyberinfrastructure":[269],"can":[277,356,412],"alleviate,":[278],"2)":[280],"describe":[282],"our":[283,372,433],"efforts":[284],"applying":[286],"contemporary":[290],"workflow":[292],"(GEMmaker)":[293],"quantify":[295],"improvements.":[297],"preliminary":[299],"evaluation":[300,424],"shows":[301],"sixfold":[303],"speed":[304],"insertion":[308],"into":[309],"workflow.":[311],"3)":[312],"pilot,":[315],"have":[317,346],"used":[318,338,362],"naming":[321],"scheme":[322],"(agreed":[323],"upon":[324],"by":[325,363],"discussed":[329],"Section":[331],"4)":[332],"publish":[334],"broadly":[337],"including":[341],"SRA.":[344],"loaded":[347],"testbed":[350],"pre-processed":[353],"genomes":[354],"be":[357],"accessed":[358],"anyone":[364],"interested":[365],"those":[367],"datasets.":[368],"Finally,":[369],"discuss":[371,408],"continued":[373],"effort":[374],"integrating":[376],"computing":[380],"platforms,":[381],"Pacific":[385],"Research":[386],"Platform":[387],"(PRP).":[388],"reader":[390],"should":[391],"note":[392],"goal":[395],"paper":[398],"NDN's":[409],"properties":[410],"benefit":[413],"do":[418],"present":[420,438],"extensive":[422],"performance":[423],"NDN-we":[426],"working":[428],"on":[429],"extending":[430],"evaluating":[432],"pilot":[434],"will":[437],"systematic":[439],"results":[440],"future":[443],"work.":[444]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
