{"id":"https://openalex.org/W7140075701","doi":"https://doi.org/10.3389/fbinf.2026.1756507","title":"SHACLens: a visualization workflow for SHACL violation exploration in knowledge graphs","display_name":"SHACLens: a visualization workflow for SHACL violation exploration in knowledge graphs","publication_year":2026,"publication_date":"2026-03-23","ids":{"openalex":"https://openalex.org/W7140075701","doi":"https://doi.org/10.3389/fbinf.2026.1756507","pmid":"https://pubmed.ncbi.nlm.nih.gov/41948189"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2026.1756507","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2026.1756507","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1756507/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1756507/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083283968","display_name":"Christian Steinparz","orcid":"https://orcid.org/0000-0002-6801-0438"},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Christian A. Steinparz","raw_affiliation_strings":["Visual Data Science Lab, Johannes Kepler University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Visual Data Science Lab, Johannes Kepler University","institution_ids":["https://openalex.org/I121883995"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066639486","display_name":"Andreas Hinterreiter","orcid":"https://orcid.org/0000-0003-4101-5180"},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Andreas Hinterreiter","raw_affiliation_strings":["Visual Data Science Lab, Johannes Kepler University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Visual Data Science Lab, Johannes Kepler University","institution_ids":["https://openalex.org/I121883995"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076156249","display_name":"Labinot Bajraktari","orcid":"https://orcid.org/0000-0002-2076-5292"},"institutions":[{"id":"https://openalex.org/I1330995197","display_name":"Boehringer Ingelheim (Germany)","ror":"https://ror.org/00q32j219","country_code":"DE","type":"company","lineage":["https://openalex.org/I1330995197"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Labinot Bajraktari","raw_affiliation_strings":["Boehringer Ingelheim RCV GmbH & Co KG"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boehringer Ingelheim RCV GmbH & Co KG","institution_ids":["https://openalex.org/I1330995197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052930466","display_name":"Vitaly Sedlyarov","orcid":"https://orcid.org/0000-0002-9872-3535"},"institutions":[{"id":"https://openalex.org/I1330995197","display_name":"Boehringer Ingelheim (Germany)","ror":"https://ror.org/00q32j219","country_code":"DE","type":"company","lineage":["https://openalex.org/I1330995197"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Vitaly Sedlyarov","raw_affiliation_strings":["Boehringer Ingelheim RCV GmbH & Co KG"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boehringer Ingelheim RCV GmbH & Co KG","institution_ids":["https://openalex.org/I1330995197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067697042","display_name":"Markus Bauer","orcid":"https://orcid.org/0000-0002-0978-197X"},"institutions":[{"id":"https://openalex.org/I1330995197","display_name":"Boehringer Ingelheim (Germany)","ror":"https://ror.org/00q32j219","country_code":"DE","type":"company","lineage":["https://openalex.org/I1330995197"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Markus J. Bauer","raw_affiliation_strings":["Boehringer Ingelheim RCV GmbH & Co KG"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boehringer Ingelheim RCV GmbH & Co KG","institution_ids":["https://openalex.org/I1330995197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060182416","display_name":"Thomas Zichner","orcid":"https://orcid.org/0000-0001-9848-7598"},"institutions":[{"id":"https://openalex.org/I1330995197","display_name":"Boehringer Ingelheim (Germany)","ror":"https://ror.org/00q32j219","country_code":"DE","type":"company","lineage":["https://openalex.org/I1330995197"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Zichner","raw_affiliation_strings":["Boehringer Ingelheim RCV GmbH & Co KG"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boehringer Ingelheim RCV GmbH & Co KG","institution_ids":["https://openalex.org/I1330995197"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5130333960","display_name":"Marc Streit","orcid":null},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Marc Streit","raw_affiliation_strings":["Visual Data Science Lab, Johannes Kepler University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Visual Data Science Lab, Johannes Kepler University","institution_ids":["https://openalex.org/I121883995"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.30386192,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"6","issue":null,"first_page":"1756507","last_page":"1756507"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.2069000005722046,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.2069000005722046,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.16169999539852142,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.1386999934911728,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6972000002861023},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6230000257492065},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.43149998784065247},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.4244000017642975},{"id":"https://openalex.org/keywords/trace","display_name":"TRACE (psycholinguistics)","score":0.42260000109672546},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.42080000042915344},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4099999964237213},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.40950000286102295},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.40869998931884766},{"id":"https://openalex.org/keywords/constraint","display_name":"Constraint (computer-aided design)","score":0.3652999997138977}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7598999738693237},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6972000002861023},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6230000257492065},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5133000016212463},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4361000061035156},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.43149998784065247},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.4244000017642975},{"id":"https://openalex.org/C75291252","wikidata":"https://www.wikidata.org/wiki/Q1315756","display_name":"TRACE (psycholinguistics)","level":2,"score":0.42260000109672546},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.42080000042915344},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4099999964237213},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.40950000286102295},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.40869998931884766},{"id":"https://openalex.org/C2776036281","wikidata":"https://www.wikidata.org/wiki/Q48769818","display_name":"Constraint (computer-aided design)","level":2,"score":0.3652999997138977},{"id":"https://openalex.org/C143587482","wikidata":"https://www.wikidata.org/wiki/Q1543216","display_name":"Iterative and incremental development","level":2,"score":0.35100001096725464},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.34869998693466187},{"id":"https://openalex.org/C57493831","wikidata":"https://www.wikidata.org/wiki/Q3134666","display_name":"Projection (relational algebra)","level":2,"score":0.3474999964237213},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.3467999994754791},{"id":"https://openalex.org/C45235069","wikidata":"https://www.wikidata.org/wiki/Q278425","display_name":"Table (database)","level":2,"score":0.3450999855995178},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34130001068115234},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3181000053882599},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.3149999976158142},{"id":"https://openalex.org/C33762810","wikidata":"https://www.wikidata.org/wiki/Q461671","display_name":"Data integrity","level":2,"score":0.3068000078201294},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.3019999861717224},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.3010999858379364},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.29190000891685486},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.2840999960899353},{"id":"https://openalex.org/C153185123","wikidata":"https://www.wikidata.org/wiki/Q1391624","display_name":"Sequence diagram","level":4,"score":0.265500009059906},{"id":"https://openalex.org/C44291984","wikidata":"https://www.wikidata.org/wiki/Q1074173","display_name":"Question answering","level":2,"score":0.2651999890804291},{"id":"https://openalex.org/C14669888","wikidata":"https://www.wikidata.org/wiki/Q4014850","display_name":"Creative visualization","level":3,"score":0.2540999948978424},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.25279998779296875},{"id":"https://openalex.org/C2778701210","wikidata":"https://www.wikidata.org/wiki/Q28130034","display_name":"Constructive","level":3,"score":0.25270000100135803},{"id":"https://openalex.org/C190290938","wikidata":"https://www.wikidata.org/wiki/Q387015","display_name":"Trie","level":3,"score":0.2526000142097473}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fbinf.2026.1756507","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2026.1756507","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1756507/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41948189","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41948189","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:9f18e735ea8e4a398e14725017f5884c","is_oa":true,"landing_page_url":"https://doaj.org/article/9f18e735ea8e4a398e14725017f5884c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 6 (2026)","raw_type":"article"},{"id":"pmh:oai:epub.jku.at/:13922187","is_oa":true,"landing_page_url":"https://epub.jku.at/doi/10.3389/fbinf.2026.1756507","pdf_url":null,"source":{"id":"https://openalex.org/S4306401788","display_name":"University Library Linz repository (Johannes Kepler Universitat Linz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121883995","host_organization_name":"Johannes Kepler University of Linz","host_organization_lineage":["https://openalex.org/I121883995"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:13051243","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13051243/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2026.1756507","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2026.1756507","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2026.1756507/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5298411846160889,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G4623047151","display_name":null,"funder_award_id":"FWF DFH 23-N","funder_id":"https://openalex.org/F4320321181","funder_display_name":"Austrian Science Fund"},{"id":"https://openalex.org/G5110192153","display_name":null,"funder_award_id":"FFG 911655 Pro2Future","funder_id":"https://openalex.org/F4320323031","funder_display_name":"\u00d6sterreichische Forschungsf\u00f6rderungsgesellschaft"}],"funders":[{"id":"https://openalex.org/F4320321181","display_name":"Austrian Science Fund","ror":"https://ror.org/013tf3c58"},{"id":"https://openalex.org/F4320323031","display_name":"\u00d6sterreichische Forschungsf\u00f6rderungsgesellschaft","ror":"https://ror.org/028jc0449"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7140075701.pdf","grobid_xml":"https://content.openalex.org/works/W7140075701.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W138233161","https://openalex.org/W1973012451","https://openalex.org/W2026743036","https://openalex.org/W2080133951","https://openalex.org/W2115556748","https://openalex.org/W2135415614","https://openalex.org/W2259122119","https://openalex.org/W2302501749","https://openalex.org/W2547288118","https://openalex.org/W2884339332","https://openalex.org/W2885943821","https://openalex.org/W2889326414","https://openalex.org/W2950796078","https://openalex.org/W2956831428","https://openalex.org/W2996569343","https://openalex.org/W3136296618","https://openalex.org/W3204781564","https://openalex.org/W4206937052","https://openalex.org/W4230130496","https://openalex.org/W4285723604","https://openalex.org/W4385711995","https://openalex.org/W4389764001","https://openalex.org/W6962694201"],"related_works":[],"abstract_inverted_index":{"Introduction:":[0],"Validating":[1],"large":[2,16],"knowledge":[3],"graphs":[4],"with":[5,41,63,84,93,163,179],"the":[6,114,146,164,180],"Shapes":[7],"Constraint":[8],"Language":[9],"(SHACL)":[10],"often":[11],"yields":[12],"violation":[13,51,94,140],"reports":[14,52],"too":[15],"to":[17,21,194],"interpret":[18],"and":[19,50,72,103,111,124,132,144,152,167,197,203],"trace":[20,145],"root":[22],"causes,":[23],"especially":[24],"in":[25],"industry-scale":[26],"datasets":[27],"such":[28],"as":[29],"pharmaceutical":[30,44,64],"omics":[31],"pipelines.":[32],"Methods:":[33],"We":[34,57,154],"present":[35],"SHACLens,":[36],"an":[37,104,158],"interactive":[38],"visualization":[39],"workflow-developed":[40],"a":[42,59,77,87,96,100,168,172],"major":[43],"partner-that":[45],"links":[46],"ontology,":[47],"instance":[48,91],"data,":[49],"across":[53,127],"multiple":[54],"coordinated":[55],"views.":[56],"contribute":[58],"practitioner-informed":[60],"workflow":[61],"co-designed":[62],"data-analysis":[65],"experts.":[66,182],"A":[67],"Node-Link":[68],"View":[69],"combines":[70,90],"ontology":[71],"groups":[73],"of":[74,82,149,191],"equivalent":[75],"violations,":[76],"projection":[78],"view":[79],"reveals":[80],"clusters":[81],"nodes":[83,178],"similar":[85],"errors,":[86],"LineUp":[88],"table":[89],"data":[92],"information,":[95],"Class":[97],"Tree":[98],"offers":[99],"class-hierarchy":[101],"overview,":[102],"integrated":[105],"LLM":[106],"assistant":[107],"provides":[108],"contextual":[109],"explanations":[110],"can":[112],"operate":[113],"system":[115],"via":[116],"natural-language":[117],"commands.":[118],"Results:":[119],"Within":[120],"this":[121,184],"workflow,":[122],"selections":[123],"filters":[125],"propagate":[126],"views,":[128],"exposing":[129],"co-occurring":[130],"errors":[131,192],"their":[133],"likely":[134],"upstream":[135],"causes.":[136],"Analysts":[137],"iteratively":[138],"identify":[139],"clusters,":[141],"inspect":[142],"correlations,":[143],"detailed":[147],"cause":[148],"errors.":[150],"Evaluation":[151],"implications:":[153],"evaluated":[155],"SHACLens":[156,186],"through":[157],"iterative":[159],"expert-in-the-loop":[160],"design":[161],"process":[162],"partner":[165],"team":[166],"qualitative":[169],"study":[170],"on":[171],"transcriptomics":[173],"dataset":[174],"containing":[175],"5,203":[176],"violating":[177],"same":[181],"In":[183],"study,":[185],"efficiently":[187],"surfaced":[188],"repeated":[189],"sets":[190],"due":[193],"missing":[195],"objects":[196],"schema":[198],"inconsistencies,":[199],"supporting":[200],"goal-oriented":[201],"analysis":[202],"serendipitous":[204],"findings.":[205]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2026-03-24T00:00:00"}
