{"id":"https://openalex.org/W4415781817","doi":"https://doi.org/10.3389/fbinf.2025.1665892","title":"Identification of ordinal relations and alternative suborders within high-dimensional molecular data","display_name":"Identification of ordinal relations and alternative suborders within high-dimensional molecular data","publication_year":2025,"publication_date":"2025-11-03","ids":{"openalex":"https://openalex.org/W4415781817","doi":"https://doi.org/10.3389/fbinf.2025.1665892","pmid":"https://pubmed.ncbi.nlm.nih.gov/41255565"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2025.1665892","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1665892","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1665892/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1665892/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072182158","display_name":"Ana Stolnicu","orcid":"https://orcid.org/0000-0003-3936-5851"},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ana Stolnicu","raw_affiliation_strings":["Institute of Medical Systems Biology, Ulm University, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Systems Biology, Ulm University, Ulm, Germany","institution_ids":["https://openalex.org/I196349391"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073115606","display_name":"Peter Bellmann","orcid":"https://orcid.org/0000-0003-0182-4469"},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter Eckhardt-Bellmann","raw_affiliation_strings":["Institute of Medical Systems Biology, Ulm University, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Systems Biology, Ulm University, Ulm, Germany","institution_ids":["https://openalex.org/I196349391"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034147176","display_name":"Angelika Kestler","orcid":"https://orcid.org/0000-0001-5214-9884"},"institutions":[{"id":"https://openalex.org/I4210155144","display_name":"University Hospital Ulm","ror":"https://ror.org/05emabm63","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210155144"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Angelika M. R. Kestler","raw_affiliation_strings":["Department of Internal Medicine I, Ulm University Hospital, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine I, Ulm University Hospital, Ulm, Germany","institution_ids":["https://openalex.org/I4210155144"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023316486","display_name":"Hans A. Kestler","orcid":"https://orcid.org/0000-0002-4759-5254"},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]},{"id":"https://openalex.org/I4210127789","display_name":"Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)","ror":"https://ror.org/039a53269","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210127789"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Hans A. Kestler","raw_affiliation_strings":["Institute of Medical Systems Biology, Ulm University, Ulm, Germany","Leibniz Institute on Aging - Fritz Lipmann Institute, Jena, Germany","Leibniz Institute on Aging \u2013 Fritz Lipmann Institute, Jena, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Systems Biology, Ulm University, Ulm, Germany","institution_ids":["https://openalex.org/I196349391"]},{"raw_affiliation_string":"Leibniz Institute on Aging - Fritz Lipmann Institute, Jena, Germany","institution_ids":["https://openalex.org/I4210127789"]},{"raw_affiliation_string":"Leibniz Institute on Aging \u2013 Fritz Lipmann Institute, Jena, Germany","institution_ids":["https://openalex.org/I4210127789"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5023316486"],"corresponding_institution_ids":["https://openalex.org/I196349391","https://openalex.org/I4210127789"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.23652503,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"5","issue":null,"first_page":"1665892","last_page":"1665892"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.15209999680519104,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.15209999680519104,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11582","display_name":"Nanopore and Nanochannel Transport Studies","score":0.07349999994039536,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12536","display_name":"Topological and Geometric Data Analysis","score":0.04820000007748604,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6776000261306763},{"id":"https://openalex.org/keywords/dimension","display_name":"Dimension (graph theory)","score":0.5572999715805054},{"id":"https://openalex.org/keywords/ordinal-data","display_name":"Ordinal data","score":0.5306000113487244},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.46950000524520874},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.3686999976634979}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6776000261306763},{"id":"https://openalex.org/C33676613","wikidata":"https://www.wikidata.org/wiki/Q13415176","display_name":"Dimension (graph theory)","level":2,"score":0.5572999715805054},{"id":"https://openalex.org/C85461838","wikidata":"https://www.wikidata.org/wiki/Q7100785","display_name":"Ordinal data","level":2,"score":0.5306000113487244},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.527400016784668},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.46950000524520874},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4318999946117401},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43070000410079956},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3750999867916107},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.3686999976634979},{"id":"https://openalex.org/C81386100","wikidata":"https://www.wikidata.org/wiki/Q7100792","display_name":"Ordinal optimization","level":3,"score":0.2791999876499176},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.2551000118255615}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2025.1665892","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1665892","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1665892/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41255565","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41255565","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:bfbae9db5089455c9c4db27c98ffc90a","is_oa":true,"landing_page_url":"https://doaj.org/article/bfbae9db5089455c9c4db27c98ffc90a","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 5 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11428828","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12620363","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2025.1665892","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1665892","pdf_url":"https://public-pages-files-2025.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1665892/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3299165440","display_name":null,"funder_award_id":"SFB 150","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G4164456307","display_name":null,"funder_award_id":"SFB_1506","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G4546850303","display_name":null,"funder_award_id":"450627322","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6281369417","display_name":null,"funder_award_id":"SFB 15","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6514247201","display_name":null,"funder_award_id":"SFB 1506","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7047655498","display_name":null,"funder_award_id":"01ZZ2316N","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G7743612666","display_name":null,"funder_award_id":"520750254","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4415781817.pdf","grobid_xml":"https://content.openalex.org/works/W4415781817.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W1145671308","https://openalex.org/W1980748394","https://openalex.org/W1984439054","https://openalex.org/W1985514943","https://openalex.org/W1992242907","https://openalex.org/W2001619934","https://openalex.org/W2005250386","https://openalex.org/W2013543641","https://openalex.org/W2033808368","https://openalex.org/W2037789405","https://openalex.org/W2043458700","https://openalex.org/W2067826589","https://openalex.org/W2068380327","https://openalex.org/W2089100006","https://openalex.org/W2096010941","https://openalex.org/W2099789788","https://openalex.org/W2100269353","https://openalex.org/W2103925554","https://openalex.org/W2105581244","https://openalex.org/W2109948920","https://openalex.org/W2116515765","https://openalex.org/W2118258530","https://openalex.org/W2121122425","https://openalex.org/W2125735327","https://openalex.org/W2129497119","https://openalex.org/W2136876513","https://openalex.org/W2138155367","https://openalex.org/W2138261897","https://openalex.org/W2150575159","https://openalex.org/W2156854847","https://openalex.org/W2158191842","https://openalex.org/W2196075541","https://openalex.org/W2395037329","https://openalex.org/W2531887049","https://openalex.org/W2603756957","https://openalex.org/W2748710555","https://openalex.org/W2750548948","https://openalex.org/W2755014682","https://openalex.org/W2761423298","https://openalex.org/W2785205694","https://openalex.org/W2786672974","https://openalex.org/W2904746252","https://openalex.org/W2952011786","https://openalex.org/W2968322776","https://openalex.org/W3045927859","https://openalex.org/W3083607226","https://openalex.org/W3093284892","https://openalex.org/W3189197737","https://openalex.org/W4211256927","https://openalex.org/W4221041873","https://openalex.org/W4229016240","https://openalex.org/W4297548975","https://openalex.org/W4406114774"],"related_works":[],"abstract_inverted_index":{"This":[0],"approach":[1],"preserves":[2],"the":[3,20,24,28,35],"inherent":[4],"ordinal":[5],"structure":[6],"by":[7],"projecting":[8],"high-dimensional":[9],"data":[10],"onto":[11],"one":[12],"single":[13],"dimension":[14],"while":[15],"simultaneously":[16],"decreasing":[17],"complexity.":[18],"Additionally,":[19],"distinct":[21],"features":[22],"of":[23,30],"resulting":[25],"thresholds":[26],"allow":[27],"prediction":[29],"potential":[31],"alternative":[32],"paths":[33],"among":[34],"suborders.":[36]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-11-03T00:00:00"}
