{"id":"https://openalex.org/W4414086572","doi":"https://doi.org/10.3389/fbinf.2025.1657895","title":"Single-cell splicing QTL analysis in pancreatic islets","display_name":"Single-cell splicing QTL analysis in pancreatic islets","publication_year":2025,"publication_date":"2025-09-10","ids":{"openalex":"https://openalex.org/W4414086572","doi":"https://doi.org/10.3389/fbinf.2025.1657895","pmid":"https://pubmed.ncbi.nlm.nih.gov/41000275"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2025.1657895","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1657895","pdf_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1657895/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1657895/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5104217614","display_name":"Jae-Won Cho","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jae-Won Cho","raw_affiliation_strings":["The Gene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital, Massachusetts General Hospital, and Harvard Medical School, Boston, MA, United States"],"affiliations":[{"raw_affiliation_string":"The Gene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital, Massachusetts General Hospital, and Harvard Medical School, Boston, MA, United States","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112111650","display_name":"Jingyi Cao","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jingyi Cao","raw_affiliation_strings":["The Gene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital, Massachusetts General Hospital, and Harvard Medical School, Boston, MA, United States"],"affiliations":[{"raw_affiliation_string":"The Gene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital, Massachusetts General Hospital, and Harvard Medical School, Boston, MA, United States","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022843288","display_name":"Martin Hemberg","orcid":"https://orcid.org/0000-0001-8895-5239"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin Hemberg","raw_affiliation_strings":["The Gene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital, Massachusetts General Hospital, and Harvard Medical School, Boston, MA, United States"],"affiliations":[{"raw_affiliation_string":"The Gene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital, Massachusetts General Hospital, and Harvard Medical School, Boston, MA, United States","institution_ids":["https://openalex.org/I1283280774"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5104217614"],"corresponding_institution_ids":["https://openalex.org/I1283280774"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.2034064,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"5","issue":null,"first_page":"1657895","last_page":"1657895"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10839","display_name":"Pancreatic function and diabetes","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11928","display_name":"Genetic Syndromes and Imprinting","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pancreatic-islets","display_name":"Pancreatic islets","score":0.7153000235557556},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.48030000925064087},{"id":"https://openalex.org/keywords/quantitative-trait-locus","display_name":"Quantitative trait locus","score":0.4016999900341034},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.33809998631477356},{"id":"https://openalex.org/keywords/islet","display_name":"Islet","score":0.33239999413490295}],"concepts":[{"id":"https://openalex.org/C2779855799","wikidata":"https://www.wikidata.org/wiki/Q728309","display_name":"Pancreatic islets","level":4,"score":0.7153000235557556},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5564000010490417},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.48030000925064087},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4083999991416931},{"id":"https://openalex.org/C81941488","wikidata":"https://www.wikidata.org/wiki/Q853421","display_name":"Quantitative trait locus","level":3,"score":0.4016999900341034},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3792000114917755},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.33809998631477356},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3352000117301941},{"id":"https://openalex.org/C165220095","wikidata":"https://www.wikidata.org/wiki/Q207524","display_name":"Islet","level":3,"score":0.33239999413490295},{"id":"https://openalex.org/C189014844","wikidata":"https://www.wikidata.org/wiki/Q189118","display_name":"Cell type","level":3,"score":0.3244999945163727},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2948000133037567},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.2818000018596649},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27219998836517334}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fbinf.2025.1657895","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1657895","pdf_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1657895/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41000275","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41000275","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:9d1486853b6d49a79791cd8a3e03d507","is_oa":true,"landing_page_url":"https://doaj.org/article/9d1486853b6d49a79791cd8a3e03d507","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 5 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11266211","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12457394","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12457394","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12457394/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2025.1657895","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1657895","pdf_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1657895/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4414086572.pdf"},"referenced_works_count":88,"referenced_works":["https://openalex.org/W1963905877","https://openalex.org/W1983291888","https://openalex.org/W1983924599","https://openalex.org/W1992021142","https://openalex.org/W1999574084","https://openalex.org/W2048618925","https://openalex.org/W2054584406","https://openalex.org/W2079588819","https://openalex.org/W2081561931","https://openalex.org/W2087036932","https://openalex.org/W2096766502","https://openalex.org/W2098000994","https://openalex.org/W2098918791","https://openalex.org/W2122327538","https://openalex.org/W2129558248","https://openalex.org/W2131478115","https://openalex.org/W2141983917","https://openalex.org/W2157752701","https://openalex.org/W2187181884","https://openalex.org/W2195724570","https://openalex.org/W2241686927","https://openalex.org/W2248907500","https://openalex.org/W2264731258","https://openalex.org/W2463988862","https://openalex.org/W2510286488","https://openalex.org/W2511131985","https://openalex.org/W2523369352","https://openalex.org/W2523419694","https://openalex.org/W2551194178","https://openalex.org/W2729434079","https://openalex.org/W2735577846","https://openalex.org/W2758815122","https://openalex.org/W2761275051","https://openalex.org/W2784545598","https://openalex.org/W2789901584","https://openalex.org/W2794480084","https://openalex.org/W2854536540","https://openalex.org/W2867868648","https://openalex.org/W2887117829","https://openalex.org/W2901534288","https://openalex.org/W2902200003","https://openalex.org/W2907618040","https://openalex.org/W2915985519","https://openalex.org/W2925762110","https://openalex.org/W2945340622","https://openalex.org/W2949807535","https://openalex.org/W2969718750","https://openalex.org/W2984472267","https://openalex.org/W2987780668","https://openalex.org/W2990360822","https://openalex.org/W3010054644","https://openalex.org/W3016974908","https://openalex.org/W3037323964","https://openalex.org/W3038774644","https://openalex.org/W3082594163","https://openalex.org/W3113755912","https://openalex.org/W3123487455","https://openalex.org/W3125889104","https://openalex.org/W3128957759","https://openalex.org/W3131055609","https://openalex.org/W3134994139","https://openalex.org/W3145969289","https://openalex.org/W3159056526","https://openalex.org/W3164845562","https://openalex.org/W3184264001","https://openalex.org/W3207492948","https://openalex.org/W4205518324","https://openalex.org/W4206027885","https://openalex.org/W4206393016","https://openalex.org/W4210522117","https://openalex.org/W4210568567","https://openalex.org/W4214586565","https://openalex.org/W4223893712","https://openalex.org/W4224212251","https://openalex.org/W4280594254","https://openalex.org/W4286839303","https://openalex.org/W4292883548","https://openalex.org/W4293068541","https://openalex.org/W4296034620","https://openalex.org/W4308616307","https://openalex.org/W4323036511","https://openalex.org/W4383894648","https://openalex.org/W4385268385","https://openalex.org/W4386600134","https://openalex.org/W4386825686","https://openalex.org/W4387264054","https://openalex.org/W4390500426","https://openalex.org/W4404969338"],"related_works":["https://openalex.org/W2379881015","https://openalex.org/W2942351976","https://openalex.org/W47320847","https://openalex.org/W2158717226","https://openalex.org/W2166735118","https://openalex.org/W2803670087","https://openalex.org/W2413302882","https://openalex.org/W3144110022","https://openalex.org/W2072376182","https://openalex.org/W2114496290"],"abstract_inverted_index":{"Our":[0],"results":[1],"provide":[2],"a":[3],"proof":[4],"of":[5,33],"concept":[6],"that":[7,20],"it":[8],"is":[9],"possible":[10],"to":[11,27],"identify":[12],"cell":[13],"type":[14],"level":[15],"sQTLs,":[16],"and":[17],"we":[18],"envision":[19],"better":[21],"powered":[22],"studies":[23],"will":[24],"allow":[25],"us":[26],"further":[28],"uncover":[29],"the":[30],"genetic":[31],"regulation":[32],"splicing.":[34]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
