{"id":"https://openalex.org/W4410905695","doi":"https://doi.org/10.3389/fbinf.2025.1613866","title":"Trail-blazing and keeping pace: building, retaining and expanding image analysis expertise","display_name":"Trail-blazing and keeping pace: building, retaining and expanding image analysis expertise","publication_year":2025,"publication_date":"2025-05-30","ids":{"openalex":"https://openalex.org/W4410905695","doi":"https://doi.org/10.3389/fbinf.2025.1613866","pmid":"https://pubmed.ncbi.nlm.nih.gov/40520511"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2025.1613866","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1613866","pdf_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1613866/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1613866/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045569388","display_name":"David Kirchenb\u00fcechler","orcid":null},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Kirchenbuechler","raw_affiliation_strings":["Center for Advanced Microscopy and Nikon Imaging Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","Department of Cell and Developmental Biology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States"],"affiliations":[{"raw_affiliation_string":"Center for Advanced Microscopy and Nikon Imaging Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","institution_ids":["https://openalex.org/I111979921"]},{"raw_affiliation_string":"Department of Cell and Developmental Biology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076289671","display_name":"Mariana De Niz","orcid":"https://orcid.org/0000-0001-6987-6789"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mariana De Niz","raw_affiliation_strings":["Center for Advanced Microscopy and Nikon Imaging Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","Department of Cell and Developmental Biology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States"],"affiliations":[{"raw_affiliation_string":"Center for Advanced Microscopy and Nikon Imaging Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","institution_ids":["https://openalex.org/I111979921"]},{"raw_affiliation_string":"Department of Cell and Developmental Biology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055273220","display_name":"Constadina Arvanitis","orcid":"https://orcid.org/0000-0002-6311-0974"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Constadina Arvanitis","raw_affiliation_strings":["Center for Advanced Microscopy and Nikon Imaging Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","Department of Cell and Developmental Biology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States"],"affiliations":[{"raw_affiliation_string":"Center for Advanced Microscopy and Nikon Imaging Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","institution_ids":["https://openalex.org/I111979921"]},{"raw_affiliation_string":"Department of Cell and Developmental Biology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States","institution_ids":["https://openalex.org/I111979921"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055273220"],"corresponding_institution_ids":["https://openalex.org/I111979921"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":3.0476,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.91218787,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"5","issue":null,"first_page":"1613866","last_page":"1613866"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9702000021934509,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pace","display_name":"Pace","score":0.8865322470664978},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.5202904343605042},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.39184221625328064},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.2609263062477112},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.1523500680923462},{"id":"https://openalex.org/keywords/geodesy","display_name":"Geodesy","score":0.07494321465492249}],"concepts":[{"id":"https://openalex.org/C2777526511","wikidata":"https://www.wikidata.org/wiki/Q691543","display_name":"Pace","level":2,"score":0.8865322470664978},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.5202904343605042},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.39184221625328064},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.2609263062477112},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.1523500680923462},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.07494321465492249}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2025.1613866","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1613866","pdf_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1613866/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40520511","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40520511","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:528dd2e4b79146b7b7e2b4ec8a83d385","is_oa":true,"landing_page_url":"https://doaj.org/article/528dd2e4b79146b7b7e2b4ec8a83d385","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 5 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:10974051","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12162573","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2025.1613866","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1613866","pdf_url":"https://www.frontiersin.org/journals/bioinformatics/articles/10.3389/fbinf.2025.1613866/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4410905695.pdf"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W2107554012","https://openalex.org/W2811106513","https://openalex.org/W3123753728","https://openalex.org/W3160059695","https://openalex.org/W3196897371","https://openalex.org/W4311126177","https://openalex.org/W4382345223","https://openalex.org/W4386271735","https://openalex.org/W4404692845"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2386723501","https://openalex.org/W2387879414","https://openalex.org/W2390304029","https://openalex.org/W2354923724","https://openalex.org/W2146830340","https://openalex.org/W2377101853","https://openalex.org/W2362180844"],"abstract_inverted_index":{"Scientific":[0],"studies":[1],"are":[2,108,232],"increasingly":[3],"complex,":[4],"involving":[5],"quantification":[6],"of":[7,34,159,197,223,238],"many":[8],"different":[9],"experimental":[10],"approaches":[11],"and":[12,24,28,44,65,104,134,157,242],"technologies.":[13],"However,":[14],"it":[15],"is":[16,40,58,93,173,183,204],"challenging":[17],"for":[18,42,154,165,189],"any":[19],"individual":[20],"scientist":[21],"to":[22,54,63,79,94,110,176,234,247],"build":[23],"retain":[25],"sufficient":[26],"expertise":[27,39,48,80],"competency":[29],"in":[30,81,219],"a":[31,52,116,174],"large":[32],"range":[33],"scientific":[35,192,240],"tools.":[36],"A":[37],"deep":[38],"critical":[41],"rigor":[43],"reproducibility;":[45],"however,":[46],"focused":[47],"can":[49,124],"easily":[50],"become":[51],"hindrance":[53],"inter-disciplinary":[55],"science.":[56],"This":[57],"particularly":[59],"true":[60],"with":[61,89,98,206],"respect":[62],"microscopy":[64,200],"image":[66,112,160,178,185,248],"analysis.":[67],"Core":[68,101],"facilities":[69],"often":[70],"bridge":[71],"this":[72,90,121,144],"gap,":[73],"serving":[74],"as":[75,115,210],"an":[76],"access":[77,246],"point":[78],"cutting-edge":[82],"technologies":[83],"while":[84],"facilitating":[85],"collaboration.":[86],"Our":[87],"purpose":[88],"perspective":[91],"piece":[92],"share":[95],"our":[96,131,140],"experience":[97,123],"other":[99],"Microscopy":[100,167],"Facility":[102],"Directors":[103],"Image":[105],"analysts":[106],"who":[107],"aiming":[109],"establish":[111],"analysis":[113,161,179,186,198],"training":[114,187],"service.":[117,180],"We":[118],"hope":[119],"that":[120,150],"shared":[122],"help":[125],"others":[126],"optimize":[127],"their":[128],"service":[129],"though":[130],"lessons":[132],"learned,":[133],"avoid":[135],"pitfalls":[136],"we":[137,146],"faced":[138],"during":[139],"Core's":[141],"timeline.":[142],"In":[143],"paper":[145],"explore":[147],"three":[148,230],"elements":[149,231],"have":[151],"been":[152],"vital":[153],"the":[155,163,190,220,227,236],"establishment":[156],"expansion":[158],"at":[162,168],"Center":[164],"Advanced":[166],"Northwestern":[169],"University.":[170],"The":[171,181,202],"first":[172],"commitment":[175],"dedicated":[177],"second":[182],"establishing":[184],"programs":[188],"local":[191],"community,":[193],"which":[194,216],"facilitates":[195],"integration":[196],"into":[199],"workflows.":[201],"third":[203],"engagement":[205],"international":[207],"organizations":[208],"such":[209],"BINA.":[211],"These":[212,229],"organization":[213],"foster":[214],"collaborations":[215],"ultimately":[217,243],"result":[218],"fruitful":[221],"dissemination":[222],"novel":[224],"tools":[225],"across":[226],"community.":[228],"essential":[233],"maximize":[235],"potential":[237],"imaging-based":[239],"research":[241],"ensuring":[244],"equal":[245],"informatics.":[249]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}
