{"id":"https://openalex.org/W4412855600","doi":"https://doi.org/10.3389/fbinf.2025.1573744","title":"Nf\u03baBin: a machine learning based method for screening TNF-\u03b1 induced NF-\u03baB inhibitors","display_name":"Nf\u03baBin: a machine learning based method for screening TNF-\u03b1 induced NF-\u03baB inhibitors","publication_year":2025,"publication_date":"2025-07-17","ids":{"openalex":"https://openalex.org/W4412855600","doi":"https://doi.org/10.3389/fbinf.2025.1573744","pmid":"https://pubmed.ncbi.nlm.nih.gov/40746657"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2025.1573744","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1573744","pdf_url":null,"source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3389/fbinf.2025.1573744","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046619508","display_name":"Shipra Jain","orcid":"https://orcid.org/0000-0002-7045-5188"},"institutions":[{"id":"https://openalex.org/I119939252","display_name":"Indraprastha Institute of Information Technology Delhi","ror":"https://ror.org/03vfp4g33","country_code":"IN","type":"education","lineage":["https://openalex.org/I119939252"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Shipra Jain","raw_affiliation_strings":["Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India"],"affiliations":[{"raw_affiliation_string":"Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India","institution_ids":["https://openalex.org/I119939252"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008198832","display_name":"Ritu Tomer","orcid":"https://orcid.org/0000-0002-6171-8660"},"institutions":[{"id":"https://openalex.org/I119939252","display_name":"Indraprastha Institute of Information Technology Delhi","ror":"https://ror.org/03vfp4g33","country_code":"IN","type":"education","lineage":["https://openalex.org/I119939252"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ritu Tomer","raw_affiliation_strings":["Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India"],"affiliations":[{"raw_affiliation_string":"Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India","institution_ids":["https://openalex.org/I119939252"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048158238","display_name":"Sumeet Patiyal","orcid":"https://orcid.org/0000-0003-1358-292X"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sumeet Patiyal","raw_affiliation_strings":["Cancer and Data Science Laboratory (CDSL), National Cancer Institute, National Institutes of Health, Bethesda, MD, United States"],"affiliations":[{"raw_affiliation_string":"Cancer and Data Science Laboratory (CDSL), National Cancer Institute, National Institutes of Health, Bethesda, MD, United States","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I1299303238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051938893","display_name":"Gajendra P. S. Raghava","orcid":"https://orcid.org/0000-0002-8902-2876"},"institutions":[{"id":"https://openalex.org/I119939252","display_name":"Indraprastha Institute of Information Technology Delhi","ror":"https://ror.org/03vfp4g33","country_code":"IN","type":"education","lineage":["https://openalex.org/I119939252"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Gajendra P. S. Raghava","raw_affiliation_strings":["Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India"],"affiliations":[{"raw_affiliation_string":"Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi, India","institution_ids":["https://openalex.org/I119939252"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5051938893"],"corresponding_institution_ids":["https://openalex.org/I119939252"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.25271873,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"5","issue":null,"first_page":"1573744","last_page":"1573744"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11591","display_name":"NF-\u03baB Signaling Pathways","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11591","display_name":"NF-\u03baB Signaling Pathways","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10678","display_name":"Inflammatory mediators and NSAID effects","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11503","display_name":"Cytokine Signaling Pathways and Interactions","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.759142279624939},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6605978012084961},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.6357632279396057},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5804370641708374},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43746042251586914}],"concepts":[{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.759142279624939},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6605978012084961},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.6357632279396057},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5804370641708374},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43746042251586914}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2025.1573744","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1573744","pdf_url":null,"source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40746657","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40746657","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:b334ef92f10942eaba29072854f84ddb","is_oa":true,"landing_page_url":"https://doaj.org/article/b334ef92f10942eaba29072854f84ddb","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 5 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11123421","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12310657","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2025.1573744","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2025.1573744","pdf_url":null,"source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6899999976158142}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":59,"referenced_works":["https://openalex.org/W1933542063","https://openalex.org/W1983074899","https://openalex.org/W1998812648","https://openalex.org/W2004691988","https://openalex.org/W2009077982","https://openalex.org/W2014301459","https://openalex.org/W2027676536","https://openalex.org/W2046056065","https://openalex.org/W2055632365","https://openalex.org/W2061434349","https://openalex.org/W2064711537","https://openalex.org/W2064728018","https://openalex.org/W2071305573","https://openalex.org/W2074150439","https://openalex.org/W2074688366","https://openalex.org/W2086189875","https://openalex.org/W2087990981","https://openalex.org/W2090198980","https://openalex.org/W2094863064","https://openalex.org/W2096560421","https://openalex.org/W2098275471","https://openalex.org/W2099308584","https://openalex.org/W2134887638","https://openalex.org/W2135919238","https://openalex.org/W2144109738","https://openalex.org/W2148119611","https://openalex.org/W2157319908","https://openalex.org/W2159887157","https://openalex.org/W2166781237","https://openalex.org/W2193162667","https://openalex.org/W2315613727","https://openalex.org/W2335925695","https://openalex.org/W2604610798","https://openalex.org/W2619450713","https://openalex.org/W2735527928","https://openalex.org/W2895264766","https://openalex.org/W2907009213","https://openalex.org/W2949800055","https://openalex.org/W2972033918","https://openalex.org/W2997591727","https://openalex.org/W3042581723","https://openalex.org/W3046909772","https://openalex.org/W3169739706","https://openalex.org/W3180882235","https://openalex.org/W3189511324","https://openalex.org/W4200385903","https://openalex.org/W4210855167","https://openalex.org/W4223592813","https://openalex.org/W4226068113","https://openalex.org/W4283789736","https://openalex.org/W4296162381","https://openalex.org/W4319748867","https://openalex.org/W4320855848","https://openalex.org/W4365458778","https://openalex.org/W4387966218","https://openalex.org/W4393152099","https://openalex.org/W4400553478","https://openalex.org/W6650437622","https://openalex.org/W6839248759"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W4387369504","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3107602296","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W4283697347"],"abstract_inverted_index":{"Finally,":[0],"this":[1],"best-performing":[2,36],"model":[3],"was":[4],"employed":[5],"to":[6,21],"screen":[7],"FDA-approved":[8],"drugs":[9,22],"for":[10],"potential":[11],"NF-\u03baB":[12],"inhibitors.":[13],"Notably,":[14],"most":[15],"of":[16],"the":[17,31],"predicted":[18],"inhibitors":[19,26],"corresponded":[20],"previously":[23],"identified":[24],"as":[25],"in":[27],"experimental":[28],"studies,":[29],"underscoring":[30],"model's":[32],"predictive":[33],"reliability.":[34],"Our":[35],"models":[37],"have":[38],"been":[39],"integrated":[40],"into":[41],"a":[42],"standalone":[43],"software":[44],"and":[45],"web":[46],"server,":[47],"Nf\u03baBin.":[48],"(https://webs.iiitd.edu.in/raghava/nfkbin/).":[49]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
