{"id":"https://openalex.org/W4406379599","doi":"https://doi.org/10.3389/fbinf.2024.1487292","title":"hsa-miR-548d-3p: a potential microRNA to target nucleocapsid and/or capsid genes in multiple members of the Flaviviridae family","display_name":"hsa-miR-548d-3p: a potential microRNA to target nucleocapsid and/or capsid genes in multiple members of the Flaviviridae family","publication_year":2025,"publication_date":"2025-01-14","ids":{"openalex":"https://openalex.org/W4406379599","doi":"https://doi.org/10.3389/fbinf.2024.1487292","pmid":"https://pubmed.ncbi.nlm.nih.gov/39877236"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2024.1487292","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2024.1487292","pdf_url":null,"source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3389/fbinf.2024.1487292","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115881664","display_name":"H. W. Cayatineto","orcid":null},"institutions":[{"id":"https://openalex.org/I142089014","display_name":"Din\u00e9 College","ror":"https://ror.org/03rbsqr59","country_code":"US","type":"education","lineage":["https://openalex.org/I142089014"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"H. W. Cayatineto","raw_affiliation_strings":["Hakim's Lab, Department of Biology, School of STEM, Din\u00e9 College, Tuba City, AZ, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hakim's Lab, Department of Biology, School of STEM, Din\u00e9 College, Tuba City, AZ, United States","institution_ids":["https://openalex.org/I142089014"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060056021","display_name":"Shazia Tabassum Hakim","orcid":"https://orcid.org/0000-0003-2904-6531"},"institutions":[{"id":"https://openalex.org/I142089014","display_name":"Din\u00e9 College","ror":"https://ror.org/03rbsqr59","country_code":"US","type":"education","lineage":["https://openalex.org/I142089014"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. T. Hakim","raw_affiliation_strings":["Hakim's Lab, Department of Biology, School of STEM, Din\u00e9 College, Tuba City, AZ, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hakim's Lab, Department of Biology, School of STEM, Din\u00e9 College, Tuba City, AZ, United States","institution_ids":["https://openalex.org/I142089014"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5115881664"],"corresponding_institution_ids":["https://openalex.org/I142089014"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00951977,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"4","issue":null,"first_page":"1487292","last_page":"1487292"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10166","display_name":"Mosquito-borne diseases and control","score":0.5095000267028809,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10166","display_name":"Mosquito-borne diseases and control","score":0.5095000267028809,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.08290000259876251,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14463","display_name":"Diverse Scientific Research Studies","score":0.03669999912381172,"subfield":{"id":"https://openalex.org/subfields/3600","display_name":"General Health Professions"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8130480051040649},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.6548906564712524},{"id":"https://openalex.org/keywords/capsid","display_name":"Capsid","score":0.6504479646682739},{"id":"https://openalex.org/keywords/flaviviridae","display_name":"Flaviviridae","score":0.5939738750457764},{"id":"https://openalex.org/keywords/flavivirus","display_name":"Flavivirus","score":0.552203893661499},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5338469743728638},{"id":"https://openalex.org/keywords/viral-replication","display_name":"Viral replication","score":0.4806560277938843},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.45966020226478577},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.44257885217666626},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.3923768699169159},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.36352598667144775},{"id":"https://openalex.org/keywords/hepatitis-c-virus","display_name":"Hepatitis C virus","score":0.3495815396308899}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8130480051040649},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6548906564712524},{"id":"https://openalex.org/C202878990","wikidata":"https://www.wikidata.org/wiki/Q830465","display_name":"Capsid","level":3,"score":0.6504479646682739},{"id":"https://openalex.org/C2777510210","wikidata":"https://www.wikidata.org/wiki/Q1331256","display_name":"Flaviviridae","level":4,"score":0.5939738750457764},{"id":"https://openalex.org/C2780568436","wikidata":"https://www.wikidata.org/wiki/Q1165479","display_name":"Flavivirus","level":3,"score":0.552203893661499},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5338469743728638},{"id":"https://openalex.org/C140704245","wikidata":"https://www.wikidata.org/wiki/Q3933202","display_name":"Viral replication","level":3,"score":0.4806560277938843},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.45966020226478577},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.44257885217666626},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.3923768699169159},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.36352598667144775},{"id":"https://openalex.org/C2776408679","wikidata":"https://www.wikidata.org/wiki/Q708693","display_name":"Hepatitis C virus","level":3,"score":0.3495815396308899}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2024.1487292","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2024.1487292","pdf_url":null,"source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39877236","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39877236","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11772435","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11772435","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:73130566b9e1450e9cec36455cb8bd4f","is_oa":true,"landing_page_url":"https://doaj.org/article/73130566b9e1450e9cec36455cb8bd4f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 4 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2024.1487292","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2024.1487292","pdf_url":null,"source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6600000262260437,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":89,"referenced_works":["https://openalex.org/W140418572","https://openalex.org/W196214360","https://openalex.org/W1119894075","https://openalex.org/W1493432185","https://openalex.org/W1582171523","https://openalex.org/W1617545988","https://openalex.org/W1657824585","https://openalex.org/W1750736953","https://openalex.org/W1857453373","https://openalex.org/W1964493174","https://openalex.org/W1971151718","https://openalex.org/W1988163167","https://openalex.org/W1995842242","https://openalex.org/W2006247279","https://openalex.org/W2016003471","https://openalex.org/W2017426710","https://openalex.org/W2022887029","https://openalex.org/W2034878866","https://openalex.org/W2046710525","https://openalex.org/W2064707126","https://openalex.org/W2065566217","https://openalex.org/W2066568438","https://openalex.org/W2066944164","https://openalex.org/W2068895548","https://openalex.org/W2070571588","https://openalex.org/W2071506940","https://openalex.org/W2073151846","https://openalex.org/W2081983232","https://openalex.org/W2091789910","https://openalex.org/W2095247923","https://openalex.org/W2105597814","https://openalex.org/W2111942038","https://openalex.org/W2112192177","https://openalex.org/W2118512880","https://openalex.org/W2124326956","https://openalex.org/W2125247714","https://openalex.org/W2129257204","https://openalex.org/W2132468289","https://openalex.org/W2134386213","https://openalex.org/W2150361201","https://openalex.org/W2150767213","https://openalex.org/W2157301325","https://openalex.org/W2168079335","https://openalex.org/W2168748007","https://openalex.org/W2170700544","https://openalex.org/W2171062859","https://openalex.org/W2171583504","https://openalex.org/W2180251151","https://openalex.org/W2214457652","https://openalex.org/W2329824334","https://openalex.org/W2418959584","https://openalex.org/W2588731051","https://openalex.org/W2751961442","https://openalex.org/W2758146432","https://openalex.org/W2775798617","https://openalex.org/W2798042901","https://openalex.org/W2810144884","https://openalex.org/W2811212358","https://openalex.org/W2884330149","https://openalex.org/W2892869232","https://openalex.org/W2900054574","https://openalex.org/W2910740782","https://openalex.org/W2950420258","https://openalex.org/W2970998293","https://openalex.org/W3005969689","https://openalex.org/W3023251337","https://openalex.org/W3096001390","https://openalex.org/W3111403312","https://openalex.org/W3163796343","https://openalex.org/W3167543103","https://openalex.org/W3182701217","https://openalex.org/W3202852421","https://openalex.org/W3210626848","https://openalex.org/W4210967474","https://openalex.org/W4210980969","https://openalex.org/W4232438220","https://openalex.org/W4233595417","https://openalex.org/W4236236547","https://openalex.org/W4244307272","https://openalex.org/W4281477291","https://openalex.org/W4285087472","https://openalex.org/W4302761288","https://openalex.org/W4307358063","https://openalex.org/W4323314249","https://openalex.org/W6605626427","https://openalex.org/W6637785043","https://openalex.org/W6679354330","https://openalex.org/W6681922830","https://openalex.org/W6744214808"],"related_works":["https://openalex.org/W1968644509","https://openalex.org/W2169487979","https://openalex.org/W1990135737","https://openalex.org/W2164776953","https://openalex.org/W4283449193","https://openalex.org/W3080274936","https://openalex.org/W2002545308","https://openalex.org/W1968194809","https://openalex.org/W3005289097","https://openalex.org/W1997359722"],"abstract_inverted_index":{"Introduction:":[0],"Flaviviridae":[1,104,219],"comprise":[2],"a":[3,86,114,179,211],"group":[4],"of":[5,102,116,195],"enveloped,":[6],"positive-stranded":[7],"RNA":[8],"viruses":[9,30,216],"that":[10,90,118],"are":[11,39,46,63,187],"mainly":[12],"transmitted":[13],"through":[14],"either":[15],"mosquitoes":[16],"or":[17,25],"tick":[18],"bites":[19],"and/or":[20,98],"contaminated":[21],"blood,":[22],"blood":[23],"products,":[24],"other":[26],"body":[27],"secretions.":[28],"These":[29,60],"cause":[31],"diseases":[32],"ranging":[33],"from":[34],"mild":[35],"to":[36,84,94,182,189,207],"severe":[37],"and":[38,58,106,124,134,146,167,175],"considered":[40],"important":[41],"human":[42],"pathogens.":[43],"MicroRNAs":[44],"(miRNAs)":[45],"non-coding":[47],"molecules":[48,62],"involved":[49],"in":[50,70],"growth,":[51],"development,":[52],"cell":[53],"proliferation,":[54],"protein":[55],"synthesis,":[56],"apoptosis,":[57],"pathogenesis.":[59],"small":[61],"even":[64],"being":[65],"used":[66,81,139],"as":[67,143,178],"gene":[68,101,166,174],"suppressors":[69],"antiviral":[71],"therapeutics,":[72],"inhibiting":[73],"viral":[74,135,169],"replication.":[75],"In":[76],"the":[77,95,103,129,154,163,191,204,218],"current":[78],"study,":[79],"we":[80,138],"bioinformatic":[82],"tools":[83],"predict":[85,128],"possible":[87,180,192],"miRNA":[88,133],"sequence":[89,125],"could":[91],"be":[92,203],"complementary":[93,160],"nucleocapsid":[96],"(NP)":[97],"capsid":[99,165,173],"(CP)":[100],"family":[105,220],"provide":[107],"an":[108],"inhibitory":[109,193],"solution.":[110],"Methods:":[111],"Bioinformatics":[112],"is":[113],"field":[115],"science":[117],"includes":[119],"tremendous":[120],"computational":[121,140,200],"analysis,":[122],"logarithms,":[123],"alignments.":[126],"To":[127],"right":[130],"alignments":[131],"between":[132],"mRNA":[136],"genomes,":[137],"databases":[141],"such":[142],"miRBase,":[144],"NCBI,":[145],"Basic":[147],"Alignment":[148],"Search":[149],"Tool-nucleotides":[150],"(BLAST-n).":[151],"Results:":[152],"Of":[153],"2,600":[155],"mature":[156],"miRNAs,":[157],"hsa-miR-548d-3p":[158,196],"revealed":[159],"sequences":[161],"with":[162],"flavivirus":[164],"bovine":[168],"diarrhea":[170],"virus":[171],"(BVDV)":[172],"was":[176],"selected":[177],"candidate":[181,223],"inhibit":[183],"flaviviruses.":[184],"Conclusion:":[185],"studies":[186],"required":[188],"test":[190],"effects":[194],"against":[197],"flaviviruses,":[198],"this":[199],"study":[201,208],"may":[202],"first":[205],"step":[206],"further,":[209],"developing":[210],"novel":[212],"therapeutic":[213],"for":[214],"lethal":[215],"within":[217],"using":[221],"suggested":[222],"miRNAs.":[224]},"counts_by_year":[],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
