{"id":"https://openalex.org/W4385580247","doi":"https://doi.org/10.3389/fbinf.2023.1255159","title":"Better research software tools to elevate the rate of scientific discovery or why we need to invest in research software engineering","display_name":"Better research software tools to elevate the rate of scientific discovery or why we need to invest in research software engineering","publication_year":2023,"publication_date":"2023-08-04","ids":{"openalex":"https://openalex.org/W4385580247","doi":"https://doi.org/10.3389/fbinf.2023.1255159","pmid":"https://pubmed.ncbi.nlm.nih.gov/37600971"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2023.1255159","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2023.1255159","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2023.1255159/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2023.1255159/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056038454","display_name":"J.R. Deschamps","orcid":"https://orcid.org/0000-0001-8462-2883"},"institutions":[{"id":"https://openalex.org/I4210115812","display_name":"Human Technopole","ror":"https://ror.org/029gmnc79","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210115812"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Joran Deschamps","raw_affiliation_strings":["Fondazione Human Technopole, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Human Technopole, Milan, Italy","institution_ids":["https://openalex.org/I4210115812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001334885","display_name":"Damian Dalle Nogare","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115812","display_name":"Human Technopole","ror":"https://ror.org/029gmnc79","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210115812"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Damian Dalle Nogare","raw_affiliation_strings":["Fondazione Human Technopole, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Human Technopole, Milan, Italy","institution_ids":["https://openalex.org/I4210115812"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045834690","display_name":"Florian Jug","orcid":"https://orcid.org/0000-0002-8499-5812"},"institutions":[{"id":"https://openalex.org/I4210115812","display_name":"Human Technopole","ror":"https://ror.org/029gmnc79","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210115812"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Florian Jug","raw_affiliation_strings":["Fondazione Human Technopole, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Human Technopole, Milan, Italy","institution_ids":["https://openalex.org/I4210115812"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210115812"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":2.9435,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.91081627,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"3","issue":null,"first_page":"1255159","last_page":"1255159"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6206000447273254},{"id":"https://openalex.org/keywords/volume","display_name":"Volume (thermodynamics)","score":0.5882036685943604},{"id":"https://openalex.org/keywords/scientific-discovery","display_name":"Scientific discovery","score":0.5166869163513184},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.49048277735710144},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.4903126060962677},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.42842793464660645},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07753336429595947},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.07185113430023193}],"concepts":[{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6206000447273254},{"id":"https://openalex.org/C20556612","wikidata":"https://www.wikidata.org/wiki/Q4469374","display_name":"Volume (thermodynamics)","level":2,"score":0.5882036685943604},{"id":"https://openalex.org/C2984917352","wikidata":"https://www.wikidata.org/wiki/Q12772819","display_name":"Scientific discovery","level":2,"score":0.5166869163513184},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.49048277735710144},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.4903126060962677},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42842793464660645},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07753336429595947},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.07185113430023193},{"id":"https://openalex.org/C188147891","wikidata":"https://www.wikidata.org/wiki/Q147638","display_name":"Cognitive science","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fbinf.2023.1255159","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2023.1255159","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2023.1255159/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37600971","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37600971","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10438982","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10438982","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10438982/pdf/fbinf-03-1255159.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:b55d30785e914d37ba3ff39b0774b26c","is_oa":true,"landing_page_url":"https://doaj.org/article/b55d30785e914d37ba3ff39b0774b26c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Bioinformatics, Vol 3 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2023.1255159","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2023.1255159","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2023.1255159/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5600000023841858,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4385580247.pdf"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1580913419","https://openalex.org/W1599633451","https://openalex.org/W1979900513","https://openalex.org/W1997854308","https://openalex.org/W2006302594","https://openalex.org/W2167279371","https://openalex.org/W2302501749","https://openalex.org/W2529052661","https://openalex.org/W2580035316","https://openalex.org/W2782676011","https://openalex.org/W2811106513","https://openalex.org/W2955250617","https://openalex.org/W2971492802","https://openalex.org/W2975634117","https://openalex.org/W3022286624","https://openalex.org/W3046401567","https://openalex.org/W3094620661","https://openalex.org/W3156643147","https://openalex.org/W4220652264","https://openalex.org/W4238092834","https://openalex.org/W4281665512","https://openalex.org/W4285395122","https://openalex.org/W4306173528","https://openalex.org/W4308361273","https://openalex.org/W4319941966","https://openalex.org/W4327785514","https://openalex.org/W4377010744","https://openalex.org/W6767227118"],"related_works":["https://openalex.org/W2361206279","https://openalex.org/W2798121181","https://openalex.org/W2016805743","https://openalex.org/W4242592912","https://openalex.org/W1481711077","https://openalex.org/W2126681669","https://openalex.org/W2148010638","https://openalex.org/W4206663545","https://openalex.org/W1978317178","https://openalex.org/W2413102523"],"abstract_inverted_index":{"OPINION":[0],"article":[1],"Front.":[2],"Bioinform.,":[3],"04":[4],"August":[5],"2023Sec.":[6],"Computational":[7],"BioImaging":[8],"Volume":[9],"3":[10],"-":[11],"2023":[12],"|":[13],"https://doi.org/10.3389/fbinf.2023.1255159":[14]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
