{"id":"https://openalex.org/W3154284343","doi":"https://doi.org/10.3389/fbinf.2021.646581","title":"OMPdb: A Global Hub of Beta-Barrel Outer Membrane Proteins","display_name":"OMPdb: A Global Hub of Beta-Barrel Outer Membrane Proteins","publication_year":2021,"publication_date":"2021-04-09","ids":{"openalex":"https://openalex.org/W3154284343","doi":"https://doi.org/10.3389/fbinf.2021.646581","mag":"3154284343","pmid":"https://pubmed.ncbi.nlm.nih.gov/36303794"},"language":"en","primary_location":{"id":"doi:10.3389/fbinf.2021.646581","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2021.646581","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2021.646581/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2021.646581/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063502033","display_name":"Ahmed F. Roumia","orcid":"https://orcid.org/0000-0003-0977-0995"},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Ahmed F. Roumia","raw_affiliation_strings":["Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece","institution_ids":["https://openalex.org/I145722265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087868319","display_name":"Konstantinos D. Tsirigos","orcid":"https://orcid.org/0000-0001-5280-1107"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Konstantinos D. Tsirigos","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Cambridge, United Kingdom"],"affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Cambridge, United Kingdom","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080412387","display_name":"Margarita C. Theodoropoulou","orcid":null},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Margarita C. Theodoropoulou","raw_affiliation_strings":["Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece","institution_ids":["https://openalex.org/I145722265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074156910","display_name":"Ioannis Tamposis","orcid":"https://orcid.org/0000-0001-9247-6871"},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Ioannis A. Tamposis","raw_affiliation_strings":["Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece","institution_ids":["https://openalex.org/I145722265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023208593","display_name":"Stavros J. Hamodrakas","orcid":"https://orcid.org/0000-0001-6280-1645"},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Stavros J. Hamodrakas","raw_affiliation_strings":["Section of Cell Biology and Biophysics, Department of Biology, School of Sciences, National and Kapodistrian University of Athens, Athens, Greece"],"affiliations":[{"raw_affiliation_string":"Section of Cell Biology and Biophysics, Department of Biology, School of Sciences, National and Kapodistrian University of Athens, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035334094","display_name":"Pantelis G. Bagos","orcid":"https://orcid.org/0000-0003-4935-2325"},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Pantelis G. Bagos","raw_affiliation_strings":["Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece","institution_ids":["https://openalex.org/I145722265"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5035334094"],"corresponding_institution_ids":["https://openalex.org/I145722265"],"apc_list":{"value":1900,"currency":"USD","value_usd":1900},"apc_paid":{"value":1900,"currency":"USD","value_usd":1900},"fwci":1.5581,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.83552615,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"1","issue":null,"first_page":"646581","last_page":"646581"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/barrel","display_name":"Barrel (horology)","score":0.9141161441802979},{"id":"https://openalex.org/keywords/bacterial-outer-membrane","display_name":"Bacterial outer membrane","score":0.7684164643287659},{"id":"https://openalex.org/keywords/transmembrane-protein","display_name":"Transmembrane protein","score":0.7611649036407471},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4612841010093689},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.45447900891304016},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44279226660728455},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.4271388649940491},{"id":"https://openalex.org/keywords/membrane-protein","display_name":"Membrane protein","score":0.41944172978401184},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3797839879989624},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26209694147109985},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.24791809916496277},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.20660173892974854},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.113923579454422},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.11341595649719238},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.08257907629013062}],"concepts":[{"id":"https://openalex.org/C172227984","wikidata":"https://www.wikidata.org/wiki/Q1400397","display_name":"Barrel (horology)","level":2,"score":0.9141161441802979},{"id":"https://openalex.org/C146587185","wikidata":"https://www.wikidata.org/wiki/Q258248","display_name":"Bacterial outer membrane","level":4,"score":0.7684164643287659},{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.7611649036407471},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4612841010093689},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.45447900891304016},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44279226660728455},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.4271388649940491},{"id":"https://openalex.org/C144647389","wikidata":"https://www.wikidata.org/wiki/Q423042","display_name":"Membrane protein","level":3,"score":0.41944172978401184},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3797839879989624},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26209694147109985},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.24791809916496277},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.20660173892974854},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.113923579454422},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.11341595649719238},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.08257907629013062},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3389/fbinf.2021.646581","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2021.646581","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2021.646581/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36303794","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36303794","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9581022","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9581022","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3389/fbinf.2021.646581","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fbinf.2021.646581","pdf_url":"https://www.frontiersin.org/articles/10.3389/fbinf.2021.646581/pdf","source":{"id":"https://openalex.org/S4210219554","display_name":"Frontiers in Bioinformatics","issn_l":"2673-7647","issn":["2673-7647"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.699999988079071,"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10"}],"awards":[{"id":"https://openalex.org/G1337233005","display_name":null,"funder_award_id":"NSRF 2014-2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3019969596","display_name":null,"funder_award_id":"5002780","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3875748329","display_name":null,"funder_award_id":"European Regional Development Fund","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G453067482","display_name":null,"funder_award_id":"014-2020","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G5634946813","display_name":null,"funder_award_id":"2014-2020","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G588361457","display_name":null,"funder_award_id":"16/2017","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6870533126","display_name":null,"funder_award_id":"2014-2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7538097724","display_name":null,"funder_award_id":"NSRF 2014-2020","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G8538941428","display_name":null,"funder_award_id":"Regional Development Fund","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8770806815","display_name":null,"funder_award_id":"NSRF 2014-20","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3154284343.pdf","grobid_xml":"https://content.openalex.org/works/W3154284343.grobid-xml"},"referenced_works_count":162,"referenced_works":["https://openalex.org/W151550344","https://openalex.org/W840773783","https://openalex.org/W1518421544","https://openalex.org/W1527241561","https://openalex.org/W1551504358","https://openalex.org/W1554827914","https://openalex.org/W1562626508","https://openalex.org/W1581392276","https://openalex.org/W1601879187","https://openalex.org/W1686077750","https://openalex.org/W1803102843","https://openalex.org/W1849156717","https://openalex.org/W1965202893","https://openalex.org/W1972222351","https://openalex.org/W1973253766","https://openalex.org/W1973904153","https://openalex.org/W1974875314","https://openalex.org/W1977503336","https://openalex.org/W1980496535","https://openalex.org/W1982077771","https://openalex.org/W1984167965","https://openalex.org/W1984717522","https://openalex.org/W1987622073","https://openalex.org/W1988529338","https://openalex.org/W1990697265","https://openalex.org/W1991340439","https://openalex.org/W1992003822","https://openalex.org/W1996764065","https://openalex.org/W1997420324","https://openalex.org/W2001276190","https://openalex.org/W2004696942","https://openalex.org/W2004916218","https://openalex.org/W2005271347","https://openalex.org/W2005988933","https://openalex.org/W2008407831","https://openalex.org/W2012534599","https://openalex.org/W2013809486","https://openalex.org/W2016752185","https://openalex.org/W2020969907","https://openalex.org/W2024103813","https://openalex.org/W2028819914","https://openalex.org/W2033134532","https://openalex.org/W2045007178","https://openalex.org/W2047663485","https://openalex.org/W2052156860","https://openalex.org/W2052164601","https://openalex.org/W2056403785","https://openalex.org/W2056825408","https://openalex.org/W2057972192","https://openalex.org/W2058735872","https://openalex.org/W2063401542","https://openalex.org/W2065663471","https://openalex.org/W2068936707","https://openalex.org/W2069564574","https://openalex.org/W2070343649","https://openalex.org/W2071571442","https://openalex.org/W2072663421","https://openalex.org/W2072805003","https://openalex.org/W2073445575","https://openalex.org/W2073592717","https://openalex.org/W2076583210","https://openalex.org/W2077244176","https://openalex.org/W2078999162","https://openalex.org/W2080239512","https://openalex.org/W2081717721","https://openalex.org/W2085019401","https://openalex.org/W2085899859","https://openalex.org/W2089511414","https://openalex.org/W2090821297","https://openalex.org/W2092490323","https://openalex.org/W2094201044","https://openalex.org/W2096525273","https://openalex.org/W2098038570","https://openalex.org/W2100548922","https://openalex.org/W2102319161","https://openalex.org/W2104267463","https://openalex.org/W2105456657","https://openalex.org/W2105537627","https://openalex.org/W2107217578","https://openalex.org/W2108564508","https://openalex.org/W2109926934","https://openalex.org/W2110596761","https://openalex.org/W2112811744","https://openalex.org/W2113541275","https://openalex.org/W2114347076","https://openalex.org/W2115069651","https://openalex.org/W2115123145","https://openalex.org/W2117129602","https://openalex.org/W2118764420","https://openalex.org/W2119130600","https://openalex.org/W2119587675","https://openalex.org/W2120061656","https://openalex.org/W2122550753","https://openalex.org/W2123947865","https://openalex.org/W2124530114","https://openalex.org/W2125879333","https://openalex.org/W2129443011","https://openalex.org/W2130106891","https://openalex.org/W2132926880","https://openalex.org/W2134087185","https://openalex.org/W2134141380","https://openalex.org/W2135819136","https://openalex.org/W2137095432","https://openalex.org/W2137531911","https://openalex.org/W2139543196","https://openalex.org/W2140831051","https://openalex.org/W2146225611","https://openalex.org/W2147987529","https://openalex.org/W2148402407","https://openalex.org/W2148993805","https://openalex.org/W2149525061","https://openalex.org/W2150433232","https://openalex.org/W2151762458","https://openalex.org/W2151831732","https://openalex.org/W2152012295","https://openalex.org/W2153180326","https://openalex.org/W2156201297","https://openalex.org/W2158714788","https://openalex.org/W2161201184","https://openalex.org/W2162792752","https://openalex.org/W2168898781","https://openalex.org/W2169262243","https://openalex.org/W2170455757","https://openalex.org/W2171132114","https://openalex.org/W2180566168","https://openalex.org/W2284964827","https://openalex.org/W2295316676","https://openalex.org/W2305992299","https://openalex.org/W2308145610","https://openalex.org/W2384587916","https://openalex.org/W2471339849","https://openalex.org/W2471671221","https://openalex.org/W2510407459","https://openalex.org/W2513652107","https://openalex.org/W2518485865","https://openalex.org/W2540140763","https://openalex.org/W2619363404","https://openalex.org/W2735058053","https://openalex.org/W2742302497","https://openalex.org/W2783952753","https://openalex.org/W2887768614","https://openalex.org/W2898402099","https://openalex.org/W2899749851","https://openalex.org/W2901361432","https://openalex.org/W2912990441","https://openalex.org/W2942626330","https://openalex.org/W2951856557","https://openalex.org/W2971001996","https://openalex.org/W3000053261","https://openalex.org/W3004395690","https://openalex.org/W3015560610","https://openalex.org/W3047377217","https://openalex.org/W3127322550","https://openalex.org/W3136918052","https://openalex.org/W4211196363","https://openalex.org/W4242123597","https://openalex.org/W4242679254","https://openalex.org/W4245447821","https://openalex.org/W4252109149","https://openalex.org/W4285719527","https://openalex.org/W6636076146","https://openalex.org/W6648144544"],"related_works":["https://openalex.org/W4388182537","https://openalex.org/W3154284343","https://openalex.org/W2146899109","https://openalex.org/W1977121829","https://openalex.org/W2768043139","https://openalex.org/W2135749642","https://openalex.org/W2097747021","https://openalex.org/W2075741622","https://openalex.org/W2090357800","https://openalex.org/W1974240269"],"abstract_inverted_index":{"OMPdb":[0],"(www.ompdb.org)":[1],"was":[2],"introduced":[3],"as":[4],"a":[5,33,60,104],"database":[6,27],"for":[7,107],"\u03b2-barrel":[8,110],"outer":[9],"membrane":[10],"proteins":[11],"from":[12,98],"Gram-negative":[13],"bacteria":[14],"in":[15,65,78],"2011":[16],"and":[17,86,114],"then":[18],"included":[19],"69,354":[20],"entries":[21],"classified":[22],"into":[23],"85":[24],"families.":[25,89],"The":[26,52],"has":[28,56],"been":[29,76],"updated":[30],"continuously":[31],"using":[32],"collection":[34],"of":[35,48,54,62,71,95],"characteristic":[36],"profile":[37],"Hidden":[38],"Markov":[39],"Models":[40],"able":[41],"to":[42,59,82,102],"discriminate":[43],"between":[44],"the":[45,66,93],"different":[46],"families":[47,55,64,85],"prokaryotic":[49],"transmembrane":[50,109],"\u03b2-barrels.":[51],"number":[53],"increased":[57],"ultimately":[58],"total":[61],"129":[63],"current,":[67],"second":[68],"major":[69],"version":[70],"OMPdb.":[72],"New":[73],"additions":[74],"have":[75],"made":[77],"parallel":[79],"with":[80],"efforts":[81],"update":[83],"existing":[84],"add":[87],"novel":[88],"Here,":[90],"we":[91],"present":[92],"upgrade":[94],"OMPdb,":[96],"which":[97],"now":[99],"on":[100],"aims":[101],"become":[103],"global":[105],"repository":[106],"all":[108],"proteins,":[111],"both":[112],"eukaryotic":[113],"bacterial.":[115]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
