{"id":"https://openalex.org/W2571549596","doi":"https://doi.org/10.32657/10356/2468","title":"Computational genomics on the grid","display_name":"Computational genomics on the grid","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W2571549596","doi":"https://doi.org/10.32657/10356/2468","mag":"2571549596"},"language":"en","primary_location":{"id":"doi:10.32657/10356/2468","is_oa":true,"landing_page_url":"https://doi.org/10.32657/10356/2468","pdf_url":"https://dr.ntu.edu.sg/bitstream/10356/2468/1/SCE-THESES_22.pdf","source":null,"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nanyang Technological University","raw_type":"dissertation"},"type":"dissertation","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dr.ntu.edu.sg/bitstream/10356/2468/1/SCE-THESES_22.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006874103","display_name":"Chunxi Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Chunxi Chen","raw_affiliation_strings":["Division of Information System School of Computer Engineering Nanyang Technological University Singapore 639798","Nanyang Technological University"],"affiliations":[{"raw_affiliation_string":"Division of Information System School of Computer Engineering Nanyang Technological University Singapore 639798","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Nanyang Technological University","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5006874103"],"corresponding_institution_ids":["https://openalex.org/I172675005"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-genomics","display_name":"Computational genomics","score":0.821174144744873},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7270367741584778},{"id":"https://openalex.org/keywords/computational-resource","display_name":"Computational resource","score":0.6324468851089478},{"id":"https://openalex.org/keywords/computational-complexity-theory","display_name":"Computational complexity theory","score":0.6123608350753784},{"id":"https://openalex.org/keywords/computational-problem","display_name":"Computational problem","score":0.6037732362747192},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.561522901058197},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.525198757648468},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4837651252746582},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.45306381583213806},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.41381925344467163},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.39362356066703796},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2649357318878174},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.20138007402420044},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.1913297176361084},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1117100715637207}],"concepts":[{"id":"https://openalex.org/C39238701","wikidata":"https://www.wikidata.org/wiki/Q2091816","display_name":"Computational genomics","level":5,"score":0.821174144744873},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7270367741584778},{"id":"https://openalex.org/C127964446","wikidata":"https://www.wikidata.org/wiki/Q1092142","display_name":"Computational resource","level":3,"score":0.6324468851089478},{"id":"https://openalex.org/C179799912","wikidata":"https://www.wikidata.org/wiki/Q205084","display_name":"Computational complexity theory","level":2,"score":0.6123608350753784},{"id":"https://openalex.org/C19754495","wikidata":"https://www.wikidata.org/wiki/Q3435924","display_name":"Computational problem","level":2,"score":0.6037732362747192},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.561522901058197},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.525198757648468},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4837651252746582},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.45306381583213806},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.41381925344467163},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.39362356066703796},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2649357318878174},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.20138007402420044},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.1913297176361084},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1117100715637207},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.32657/10356/2468","is_oa":true,"landing_page_url":"https://doi.org/10.32657/10356/2468","pdf_url":"https://dr.ntu.edu.sg/bitstream/10356/2468/1/SCE-THESES_22.pdf","source":null,"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nanyang Technological University","raw_type":"dissertation"},{"id":"pmh:oai:dr.ntu.edu.sg:10356/2468","is_oa":false,"landing_page_url":"https://hdl.handle.net/10356/2468","pdf_url":null,"source":{"id":"https://openalex.org/S4306402609","display_name":"DR-NTU (Nanyang Technological University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172675005","host_organization_name":"Nanyang Technological University","host_organization_lineage":["https://openalex.org/I172675005"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Thesis"},{"id":"pmh:oai:uilis.unsyiah.ac.id:18484","is_oa":false,"landing_page_url":"http://hdl.handle.net/10356/2468","pdf_url":null,"source":{"id":"https://openalex.org/S4377196378","display_name":"UPT. Syiah Kuala University Library (Syiah Kuala University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I187494767","host_organization_name":"Universitas Syiah Kuala","host_organization_lineage":["https://openalex.org/I187494767"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"}],"best_oa_location":{"id":"doi:10.32657/10356/2468","is_oa":true,"landing_page_url":"https://doi.org/10.32657/10356/2468","pdf_url":"https://dr.ntu.edu.sg/bitstream/10356/2468/1/SCE-THESES_22.pdf","source":null,"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nanyang Technological University","raw_type":"dissertation"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2571549596.pdf","grobid_xml":"https://content.openalex.org/works/W2571549596.grobid-xml"},"referenced_works_count":96,"referenced_works":["https://openalex.org/W36405680","https://openalex.org/W1487179814","https://openalex.org/W1492040731","https://openalex.org/W1492522106","https://openalex.org/W1502171645","https://openalex.org/W1502188345","https://openalex.org/W1502621331","https://openalex.org/W1517600056","https://openalex.org/W1524798462","https://openalex.org/W1540616176","https://openalex.org/W1571053466","https://openalex.org/W1693765438","https://openalex.org/W1792200765","https://openalex.org/W1898245000","https://openalex.org/W1903036498","https://openalex.org/W1931584711","https://openalex.org/W1955121107","https://openalex.org/W1964918240","https://openalex.org/W1967321130","https://openalex.org/W1981014117","https://openalex.org/W1986014242","https://openalex.org/W1990061958","https://openalex.org/W2002452469","https://openalex.org/W2003608043","https://openalex.org/W2004618348","https://openalex.org/W2008841836","https://openalex.org/W2011318182","https://openalex.org/W2015292449","https://openalex.org/W2029195137","https://openalex.org/W2030962049","https://openalex.org/W2033512766","https://openalex.org/W2035524445","https://openalex.org/W2036881356","https://openalex.org/W2038605324","https://openalex.org/W2041351581","https://openalex.org/W2045271686","https://openalex.org/W2048481414","https://openalex.org/W2054849588","https://openalex.org/W2055417893","https://openalex.org/W2055771427","https://openalex.org/W2057998009","https://openalex.org/W2059513841","https://openalex.org/W2060951907","https://openalex.org/W2063822318","https://openalex.org/W2074231493","https://openalex.org/W2077783617","https://openalex.org/W2081612620","https://openalex.org/W2086327284","https://openalex.org/W2087064593","https://openalex.org/W2091257550","https://openalex.org/W2094186309","https://openalex.org/W2096499877","https://openalex.org/W2105926960","https://openalex.org/W2107282968","https://openalex.org/W2108165346","https://openalex.org/W2108215151","https://openalex.org/W2111996486","https://openalex.org/W2115761267","https://openalex.org/W2116628377","https://openalex.org/W2116688916","https://openalex.org/W2120381149","https://openalex.org/W2120588157","https://openalex.org/W2121252285","https://openalex.org/W2123864088","https://openalex.org/W2125106792","https://openalex.org/W2126216121","https://openalex.org/W2127495498","https://openalex.org/W2128591967","https://openalex.org/W2132926880","https://openalex.org/W2133512442","https://openalex.org/W2134616089","https://openalex.org/W2135938932","https://openalex.org/W2139126523","https://openalex.org/W2143136620","https://openalex.org/W2144176169","https://openalex.org/W2148203983","https://openalex.org/W2153609988","https://openalex.org/W2154284350","https://openalex.org/W2163680465","https://openalex.org/W2533248932","https://openalex.org/W2780466810","https://openalex.org/W2903691225","https://openalex.org/W2949835970","https://openalex.org/W3137100784","https://openalex.org/W4206374842","https://openalex.org/W4231640021","https://openalex.org/W4233712203","https://openalex.org/W4236236547","https://openalex.org/W4241051276","https://openalex.org/W4255701709","https://openalex.org/W4293196852","https://openalex.org/W4312489764","https://openalex.org/W4386749951","https://openalex.org/W6632287593","https://openalex.org/W6665077095","https://openalex.org/W6671836984"],"related_works":["https://openalex.org/W2354102142","https://openalex.org/W2378302565","https://openalex.org/W2125016965","https://openalex.org/W2141467654","https://openalex.org/W1569631234","https://openalex.org/W4214707141","https://openalex.org/W15898768","https://openalex.org/W4383863468","https://openalex.org/W2365377379","https://openalex.org/W2751685088"],"abstract_inverted_index":{"The":[0,14],"post-genomic":[1],"era":[2],"is":[3,51],"characterized":[4],"by":[5],"large":[6,15,37],"amount":[7],"of":[8,17,23],"data":[9,19,33],"available":[10],"from":[11],"sequencing":[12],"projects.":[13],"size":[16],"biological":[18,24],"sets,":[20],"inherent":[21],"complexity":[22],"problems":[25,49],"and":[26,39],"the":[27],"ability":[28],"to":[29,45],"deal":[30],"with":[31],"error-prone":[32],"all":[34],"result":[35],"in":[36],"run-time":[38],"memory":[40],"requirements.":[41],"Using":[42],"parallel":[43],"computing":[44],"solve":[46],"computational":[47],"genomics":[48],"efficiently":[50],"therefore":[52],"widely":[53],"used":[54],"approach.":[55]},"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
