{"id":"https://openalex.org/W4327747323","doi":"https://doi.org/10.3233/sw-223226","title":"Terminology and ontology development for semantic annotation: A use case on sepsis and adverse events","display_name":"Terminology and ontology development for semantic annotation: A use case on sepsis and adverse events","publication_year":2023,"publication_date":"2023-03-17","ids":{"openalex":"https://openalex.org/W4327747323","doi":"https://doi.org/10.3233/sw-223226"},"language":"en","primary_location":{"id":"doi:10.3233/sw-223226","is_oa":true,"landing_page_url":"https://doi.org/10.3233/sw-223226","pdf_url":"https://content.iospress.com:443/download/semantic-web/sw223226?id=semantic-web%2Fsw223226","source":{"id":"https://openalex.org/S4210177235","display_name":"Semantic Web","issn_l":"1570-0844","issn":["1570-0844","2210-4968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Semantic Web","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://content.iospress.com:443/download/semantic-web/sw223226?id=semantic-web%2Fsw223226","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044150479","display_name":"Melissa Y. Yan","orcid":"https://orcid.org/0000-0002-8079-7923"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Melissa Y. Yan","raw_affiliation_strings":["Department of Computer Science, Norwegian University of Science and Technology, Trondheim, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Norwegian University of Science and Technology, Trondheim, Norway","institution_ids":["https://openalex.org/I204778367"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006178262","display_name":"Lise Tuset Gustad","orcid":"https://orcid.org/0000-0003-2709-3991"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]},{"id":"https://openalex.org/I2800375777","display_name":"Levanger Hospital","ror":"https://ror.org/029nzwk08","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I2800375777"]},{"id":"https://openalex.org/I2802079931","display_name":"Nord University","ror":"https://ror.org/030mwrt98","country_code":"NO","type":"education","lineage":["https://openalex.org/I2802079931"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Lise Tuset Gustad","raw_affiliation_strings":["Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway","Department of Medicine, Levanger Hospital, Nord-Tr\u00f8ndelag Hospital Trust, Levanger, Norway","Faculty of Nursing and Health Sciences, Nord University, Levanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway","institution_ids":["https://openalex.org/I204778367"]},{"raw_affiliation_string":"Department of Medicine, Levanger Hospital, Nord-Tr\u00f8ndelag Hospital Trust, Levanger, Norway","institution_ids":["https://openalex.org/I2800375777"]},{"raw_affiliation_string":"Faculty of Nursing and Health Sciences, Nord University, Levanger, Norway","institution_ids":["https://openalex.org/I2802079931"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058109134","display_name":"Lise Husby H\u00f8vik","orcid":"https://orcid.org/0000-0001-6380-029X"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]},{"id":"https://openalex.org/I4210104358","display_name":"St Olav's University Hospital","ror":"https://ror.org/01a4hbq44","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I4210104358"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Lise Husby H\u00f8vik","raw_affiliation_strings":["Clinic of Anaesthesia and Intensive Care, St. Olavs hospital, Trondheim University Hospital, Trondheim, Norway","Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinic of Anaesthesia and Intensive Care, St. Olavs hospital, Trondheim University Hospital, Trondheim, Norway","institution_ids":["https://openalex.org/I4210104358"]},{"raw_affiliation_string":"Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway","institution_ids":["https://openalex.org/I204778367"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022242950","display_name":"\u00d8ystein Nytr\u00f8","orcid":"https://orcid.org/0000-0002-8163-2362"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"\u00d8ystein Nytr\u00f8","raw_affiliation_strings":["Department of Computer Science, Norwegian University of Science and Technology, Trondheim, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Norwegian University of Science and Technology, Trondheim, Norway","institution_ids":["https://openalex.org/I204778367"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044150479"],"corresponding_institution_ids":["https://openalex.org/I204778367"],"apc_list":null,"apc_paid":null,"fwci":0.4077,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.64142102,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"14","issue":"5","first_page":"811","last_page":"871"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12881","display_name":"linguistics and terminology studies","score":0.9592000246047974,"subfield":{"id":"https://openalex.org/subfields/1203","display_name":"Language and Linguistics"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8285003900527954},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.8266427516937256},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.804620087146759},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6225982308387756},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5951297879219055},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5313825011253357},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5270079374313354},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.5061699748039246},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.4762080907821655},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.44680255651474},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.3068711757659912},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.1687050759792328}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8285003900527954},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.8266427516937256},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.804620087146759},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6225982308387756},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5951297879219055},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5313825011253357},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5270079374313354},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.5061699748039246},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.4762080907821655},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.44680255651474},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.3068711757659912},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.1687050759792328},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3233/sw-223226","is_oa":true,"landing_page_url":"https://doi.org/10.3233/sw-223226","pdf_url":"https://content.iospress.com:443/download/semantic-web/sw223226?id=semantic-web%2Fsw223226","source":{"id":"https://openalex.org/S4210177235","display_name":"Semantic Web","issn_l":"1570-0844","issn":["1570-0844","2210-4968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Semantic Web","raw_type":"journal-article"},{"id":"pmh:oai:munin.uit.no:10037/29241","is_oa":true,"landing_page_url":"https://hdl.handle.net/10037/29241","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:nordopen.nord.no:11250/3069848","is_oa":true,"landing_page_url":"https://hdl.handle.net/11250/3069848","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"811-871","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:ntnuopen.ntnu.no:11250/3069657","is_oa":true,"landing_page_url":"https://hdl.handle.net/11250/3069657","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"811-871","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.3233/sw-223226","is_oa":true,"landing_page_url":"https://doi.org/10.3233/sw-223226","pdf_url":"https://content.iospress.com:443/download/semantic-web/sw223226?id=semantic-web%2Fsw223226","source":{"id":"https://openalex.org/S4210177235","display_name":"Semantic Web","issn_l":"1570-0844","issn":["1570-0844","2210-4968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Semantic Web","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.800000011920929,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4327747323.pdf"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W50022627","https://openalex.org/W1075774232","https://openalex.org/W1861620696","https://openalex.org/W1912501061","https://openalex.org/W2000397925","https://openalex.org/W2023806451","https://openalex.org/W2048351815","https://openalex.org/W2074944495","https://openalex.org/W2078922557","https://openalex.org/W2088911157","https://openalex.org/W2103260426","https://openalex.org/W2106851243","https://openalex.org/W2114388055","https://openalex.org/W2116034137","https://openalex.org/W2118686428","https://openalex.org/W2129458770","https://openalex.org/W2141201603","https://openalex.org/W2142093121","https://openalex.org/W2144581466","https://openalex.org/W2148014577","https://openalex.org/W2159583324","https://openalex.org/W2163670493","https://openalex.org/W2164699478","https://openalex.org/W2282181907","https://openalex.org/W2324853350","https://openalex.org/W2397115164","https://openalex.org/W2468221466","https://openalex.org/W2604710187","https://openalex.org/W2742218798","https://openalex.org/W2764222390","https://openalex.org/W2771524216","https://openalex.org/W2786912752","https://openalex.org/W2806490016","https://openalex.org/W2891115123","https://openalex.org/W2901493185","https://openalex.org/W2937307384","https://openalex.org/W2971885957","https://openalex.org/W3043067930","https://openalex.org/W3113523639","https://openalex.org/W4205771048","https://openalex.org/W4206245411","https://openalex.org/W4241904535","https://openalex.org/W6609507529","https://openalex.org/W6627066560","https://openalex.org/W6711985232"],"related_works":["https://openalex.org/W2355326633","https://openalex.org/W2726617685","https://openalex.org/W2804669904","https://openalex.org/W2066689607","https://openalex.org/W2396811154","https://openalex.org/W2363188691","https://openalex.org/W2393025778","https://openalex.org/W2111194626","https://openalex.org/W2357775360","https://openalex.org/W1506177826"],"abstract_inverted_index":{"Annotations":[0],"enrich":[1],"text":[2],"corpora":[3],"and":[4,15,48,60,75,95,102,115],"provide":[5,28],"necessary":[6],"labels":[7],"for":[8,45,92],"natural":[9],"language":[10],"processing":[11],"studies.":[12],"To":[13],"reason":[14,101],"infer":[16,103],"underlying":[17],"implicit":[18,104],"knowledge":[19,98],"captured":[20],"by":[21],"labels,":[22],"an":[23],"ontology":[24,62,112,122],"is":[25,90],"needed":[26,99],"to":[27,100,117],"a":[29,38,51,58],"semantically":[30],"annotated":[31,44,73],"corpus":[32,39],"with":[33],"structured":[34],"domain":[35,97,118],"knowledge.":[36],"Utilizing":[37],"of":[40],"adverse":[41],"event":[42],"documents":[43,74],"sepsis-related":[46],"signs":[47],"symptoms":[49],"as":[50],"use":[52,94],"case,":[53],"this":[54],"paper":[55],"details":[56],"how":[57],"terminology":[59],"corresponding":[61],"were":[63],"developed.":[64],"The":[65,108],"Annotated":[66],"Adverse":[67],"Event":[68],"NOte":[69],"TErminology":[70],"(AAENOTE)":[71],"represents":[72],"assists":[76],"annotators":[77],"in":[78],"annotating":[79],"text.":[80],"In":[81],"contrast,":[82],"the":[83],"complementary":[84],"Catheter":[85],"Infection":[86],"Indications":[87],"Ontology":[88],"(CIIO)":[89],"intended":[91],"clinician":[93],"captures":[96],"information":[105],"from":[106],"data.":[107],"approach":[109],"taken":[110],"makes":[111],"development":[113],"understandable":[114],"accessible":[116],"experts":[119],"without":[120],"formal":[121],"training.":[123]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
