{"id":"https://openalex.org/W2337221773","doi":"https://doi.org/10.3233/sw-150190","title":"TraitBank: Practical semantics for organism attribute data","display_name":"TraitBank: Practical semantics for organism attribute data","publication_year":2016,"publication_date":"2016-10-11","ids":{"openalex":"https://openalex.org/W2337221773","doi":"https://doi.org/10.3233/sw-150190","mag":"2337221773"},"language":"en","primary_location":{"id":"doi:10.3233/sw-150190","is_oa":true,"landing_page_url":"https://doi.org/10.3233/sw-150190","pdf_url":"https://content.iospress.com:443/download/semantic-web/sw190?id=semantic-web%2Fsw190","source":{"id":"https://openalex.org/S4210177235","display_name":"Semantic Web","issn_l":"1570-0844","issn":["1570-0844","2210-4968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Semantic Web","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://content.iospress.com:443/download/semantic-web/sw190?id=semantic-web%2Fsw190","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022119075","display_name":"Cynthia Parr","orcid":"https://orcid.org/0000-0002-8870-7099"},"institutions":[{"id":"https://openalex.org/I103187081","display_name":"Smithsonian Institution","ror":"https://ror.org/01pp8nd67","country_code":"US","type":"funder","lineage":["https://openalex.org/I103187081"]},{"id":"https://openalex.org/I1341618623","display_name":"National Museum of Natural History","ror":"https://ror.org/00cz47042","country_code":"US","type":"archive","lineage":["https://openalex.org/I103187081","https://openalex.org/I1341618623"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cynthia S. Parr","raw_affiliation_strings":["National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu","institution_ids":["https://openalex.org/I1341618623","https://openalex.org/I103187081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024250990","display_name":"Katja Schulz","orcid":"https://orcid.org/0000-0001-7134-3324"},"institutions":[{"id":"https://openalex.org/I1341618623","display_name":"National Museum of Natural History","ror":"https://ror.org/00cz47042","country_code":"US","type":"archive","lineage":["https://openalex.org/I103187081","https://openalex.org/I1341618623"]},{"id":"https://openalex.org/I103187081","display_name":"Smithsonian Institution","ror":"https://ror.org/01pp8nd67","country_code":"US","type":"funder","lineage":["https://openalex.org/I103187081"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Katja S. Schulz","raw_affiliation_strings":["National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu","institution_ids":["https://openalex.org/I1341618623","https://openalex.org/I103187081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020378268","display_name":"Jennifer Hammock","orcid":"https://orcid.org/0000-0002-9943-2342"},"institutions":[{"id":"https://openalex.org/I1341618623","display_name":"National Museum of Natural History","ror":"https://ror.org/00cz47042","country_code":"US","type":"archive","lineage":["https://openalex.org/I103187081","https://openalex.org/I1341618623"]},{"id":"https://openalex.org/I103187081","display_name":"Smithsonian Institution","ror":"https://ror.org/01pp8nd67","country_code":"US","type":"funder","lineage":["https://openalex.org/I103187081"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer Hammock","raw_affiliation_strings":["National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu","institution_ids":["https://openalex.org/I1341618623","https://openalex.org/I103187081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103824331","display_name":"Nathan Wilson","orcid":null},"institutions":[{"id":"https://openalex.org/I1338920048","display_name":"Marine Biological Laboratory","ror":"https://ror.org/046dg4z72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1338920048"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Nathan Wilson","raw_affiliation_strings":["Marine Biological Laboratory, Woods Hole, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marine Biological Laboratory, Woods Hole, Massachusetts, USA","institution_ids":["https://openalex.org/I1338920048"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089075136","display_name":"Patrick Leary","orcid":null},"institutions":[{"id":"https://openalex.org/I1338920048","display_name":"Marine Biological Laboratory","ror":"https://ror.org/046dg4z72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1338920048"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Patrick Leary","raw_affiliation_strings":["Marine Biological Laboratory, Woods Hole, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marine Biological Laboratory, Woods Hole, Massachusetts, USA","institution_ids":["https://openalex.org/I1338920048"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036047258","display_name":"Jeremy Rice","orcid":null},"institutions":[{"id":"https://openalex.org/I1338920048","display_name":"Marine Biological Laboratory","ror":"https://ror.org/046dg4z72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1338920048"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeremy Rice","raw_affiliation_strings":["Marine Biological Laboratory, Woods Hole, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marine Biological Laboratory, Woods Hole, Massachusetts, USA","institution_ids":["https://openalex.org/I1338920048"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075655263","display_name":"Robert J. Corrigan","orcid":null},"institutions":[{"id":"https://openalex.org/I1341618623","display_name":"National Museum of Natural History","ror":"https://ror.org/00cz47042","country_code":"US","type":"archive","lineage":["https://openalex.org/I103187081","https://openalex.org/I1341618623"]},{"id":"https://openalex.org/I103187081","display_name":"Smithsonian Institution","ror":"https://ror.org/01pp8nd67","country_code":"US","type":"funder","lineage":["https://openalex.org/I103187081"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert J. Corrigan","raw_affiliation_strings":["National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. E-mails:\u00a0csparr@gmail.com,\u00a0schulzk@si.edu","institution_ids":["https://openalex.org/I1341618623","https://openalex.org/I103187081"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5022119075","https://openalex.org/A5024250990","https://openalex.org/A5089075136","https://openalex.org/A5103824331"],"corresponding_institution_ids":["https://openalex.org/I103187081","https://openalex.org/I1338920048","https://openalex.org/I1341618623"],"apc_list":null,"apc_paid":null,"fwci":7.8252,"has_fulltext":true,"cited_by_count":47,"citation_normalized_percentile":{"value":0.96782497,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"7","issue":"6","first_page":"577","last_page":"588"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6902822256088257},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.6515451669692993},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.6492515802383423},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5791100859642029},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.4985833168029785},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4647146463394165},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4528062343597412},{"id":"https://openalex.org/keywords/tree-of-life","display_name":"Tree of life (biology)","score":0.4376474618911743},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4341300129890442},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.33667898178100586},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1130061149597168},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10365256667137146}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6902822256088257},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.6515451669692993},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.6492515802383423},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5791100859642029},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.4985833168029785},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4647146463394165},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4528062343597412},{"id":"https://openalex.org/C124388736","wikidata":"https://www.wikidata.org/wiki/Q3247497","display_name":"Tree of life (biology)","level":4,"score":0.4376474618911743},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4341300129890442},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.33667898178100586},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1130061149597168},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10365256667137146},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3233/sw-150190","is_oa":true,"landing_page_url":"https://doi.org/10.3233/sw-150190","pdf_url":"https://content.iospress.com:443/download/semantic-web/sw190?id=semantic-web%2Fsw190","source":{"id":"https://openalex.org/S4210177235","display_name":"Semantic Web","issn_l":"1570-0844","issn":["1570-0844","2210-4968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Semantic Web","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.684.737","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.684.737","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.semantic-web-journal.net/system/files/swj650.pdf","raw_type":"text"},{"id":"pmh:oai:darchive.mblwhoilibrary.org:1912/8642","is_oa":true,"landing_page_url":"https://hdl.handle.net/1912/8642","pdf_url":null,"source":{"id":"https://openalex.org/S4306400781","display_name":"Open Access Server of the Woods Hole Scientific Community (Woods Hole Scientific Community)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.3233/sw-150190","is_oa":true,"landing_page_url":"https://doi.org/10.3233/sw-150190","pdf_url":"https://content.iospress.com:443/download/semantic-web/sw190?id=semantic-web%2Fsw190","source":{"id":"https://openalex.org/S4210177235","display_name":"Semantic Web","issn_l":"1570-0844","issn":["1570-0844","2210-4968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Semantic Web","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.5699999928474426}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306083","display_name":"Smithsonian Institution","ror":"https://ror.org/01pp8nd67"},{"id":"https://openalex.org/F4320306142","display_name":"John D. and Catherine T. MacArthur Foundation","ror":"https://ror.org/00dxczh48"},{"id":"https://openalex.org/F4320306151","display_name":"Alfred P. Sloan Foundation","ror":"https://ror.org/052csg198"},{"id":"https://openalex.org/F4320332618","display_name":"Faculty of Arts and Sciences","ror":"https://ror.org/03vek6s52"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2337221773.pdf","grobid_xml":"https://content.openalex.org/works/W2337221773.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W139226361","https://openalex.org/W618057993","https://openalex.org/W1714145855","https://openalex.org/W1964255443","https://openalex.org/W1965535779","https://openalex.org/W1990628530","https://openalex.org/W1997592224","https://openalex.org/W2001306005","https://openalex.org/W2002507929","https://openalex.org/W2004321980","https://openalex.org/W2007859640","https://openalex.org/W2015191210","https://openalex.org/W2028027437","https://openalex.org/W2032578329","https://openalex.org/W2036427984","https://openalex.org/W2041241689","https://openalex.org/W2042279614","https://openalex.org/W2049916132","https://openalex.org/W2061920292","https://openalex.org/W2065930183","https://openalex.org/W2067227875","https://openalex.org/W2075391940","https://openalex.org/W2079335886","https://openalex.org/W2097877306","https://openalex.org/W2111299816","https://openalex.org/W2111887915","https://openalex.org/W2112744842","https://openalex.org/W2113619626","https://openalex.org/W2116034137","https://openalex.org/W2120534674","https://openalex.org/W2124282646","https://openalex.org/W2134148450","https://openalex.org/W2136445550","https://openalex.org/W2138900077","https://openalex.org/W2144427809","https://openalex.org/W2146679517","https://openalex.org/W2146713153","https://openalex.org/W2156828625","https://openalex.org/W2158155342","https://openalex.org/W2159327312","https://openalex.org/W2162584119","https://openalex.org/W2168494870","https://openalex.org/W2178026535","https://openalex.org/W2250162742","https://openalex.org/W2253872639","https://openalex.org/W2273729489","https://openalex.org/W2467734813","https://openalex.org/W2902140193","https://openalex.org/W2985505473","https://openalex.org/W4233939380","https://openalex.org/W6619266041","https://openalex.org/W6647966299"],"related_works":["https://openalex.org/W24843447","https://openalex.org/W2093262417","https://openalex.org/W2123131699","https://openalex.org/W94193318","https://openalex.org/W913131694","https://openalex.org/W650116260","https://openalex.org/W2378329187","https://openalex.org/W4390790060","https://openalex.org/W1603423477","https://openalex.org/W3100853633"],"abstract_inverted_index":{"Encyclopedia":[0],"of":[1,28,88,96],"Life":[2],"(EOL)":[3],"has":[4],"developed":[5],"TraitBank":[6,16,45,67],"(http://eol.org/traitbank),":[7],"a":[8,52],"new":[9],"repository":[10],"for":[11,23],"organism":[12],"attribute":[13,21],"(trait)":[14],"data.":[15,98],"aggregates,":[17],"manages":[18,48],"and":[19,38,47,59,69,81,83,86],"serves":[20],"data":[22,40,50],"organisms":[24],"across":[25,65],"the":[26,66,84,94],"tree":[27],"life,":[29],"including":[30],"life":[31],"history":[32],"characteristics,":[33],"habitats,":[34],"distributions,":[35],"ecological":[36],"relationships":[37],"other":[39,72],"types.":[41],"We":[42,74],"describe":[43],"how":[44],"ingests":[46],"these":[49],"in":[51],"way":[53],"that":[54],"leverages":[55],"EOL's":[56],"existing":[57],"infrastructure":[58],"semantic":[60],"annotations":[61],"to":[62,93],"facilitate":[63],"reasoning":[64],"corpus":[68],"interoperability":[70],"with":[71],"resources.":[73],"also":[75],"discuss":[76],"TraitBank's":[77],"impact":[78],"on":[79],"users":[80],"collaborators":[82],"challenges":[85],"benefits":[87],"our":[89],"lightweight,":[90],"scalable":[91],"approach":[92],"integration":[95],"biodiversity":[97]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
