{"id":"https://openalex.org/W4413050136","doi":"https://doi.org/10.3233/shti250943","title":"A Neural Embedding Approach to Mapping Health Concepts to Concept Unique Identifiers","display_name":"A Neural Embedding Approach to Mapping Health Concepts to Concept Unique Identifiers","publication_year":2025,"publication_date":"2025-08-07","ids":{"openalex":"https://openalex.org/W4413050136","doi":"https://doi.org/10.3233/shti250943","pmid":"https://pubmed.ncbi.nlm.nih.gov/40775961"},"language":"en","primary_location":{"id":"doi:10.3233/shti250943","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250943","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.3233/shti250943","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045470122","display_name":"Keyuan Jiang","orcid":"https://orcid.org/0000-0002-1565-3202"},"institutions":[{"id":"https://openalex.org/I117015748","display_name":"Purdue University Northwest","ror":"https://ror.org/04keq6987","country_code":"US","type":"education","lineage":["https://openalex.org/I117015748"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Keyuan Jiang","raw_affiliation_strings":["Purdue University Northwest"],"raw_orcid":"https://orcid.org/0000-0002-1565-3202","affiliations":[{"raw_affiliation_string":"Purdue University Northwest","institution_ids":["https://openalex.org/I117015748"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052393113","display_name":"Gordon R. Bernard","orcid":"https://orcid.org/0000-0002-4721-3068"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gordon R. Bernard","raw_affiliation_strings":["Vanderbilt University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University","institution_ids":["https://openalex.org/I200719446"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.23953363,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"329","issue":null,"first_page":"764","last_page":"768"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.5683000087738037,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.5683000087738037,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.764183759689331},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7025105357170105},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.5784770250320435},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4580681622028351},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08671671152114868}],"concepts":[{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.764183759689331},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7025105357170105},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.5784770250320435},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4580681622028351},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08671671152114868}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti250943","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250943","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:40775961","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40775961","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.3233/shti250943","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250943","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W4378651134","https://openalex.org/W4252684102","https://openalex.org/W2608983118","https://openalex.org/W2352307597","https://openalex.org/W1979633005","https://openalex.org/W2163724607","https://openalex.org/W3135403405"],"abstract_inverted_index":{"Understanding":[0],"health":[1,45,80],"concepts":[2,19,46,64,81,103],"in":[3,10,47],"free":[4,48],"text":[5,49],"is":[6,148],"an":[7],"important":[8],"task":[9],"biomedical":[11,31],"NLP.":[12],"Being":[13],"able":[14],"to":[15,20,43,61,65,78,82,156],"map":[16,62],"the":[17,59,63,83,98,133,140],"extracted":[18],"unique":[21,66,102],"concept":[22],"identifiers":[23,67],"can":[24],"facilitate":[25],"integration":[26,161],"of":[27,35,54,100,112,123],"and":[28,104,109,116,126],"interoperability":[29],"across":[30],"informatics":[32],"applications.":[33],"Advancement":[34],"pretrained":[36],"large":[37,163],"language":[38,164],"models":[39,165],"made":[40],"it":[41],"possible":[42],"identify":[44],"with":[50,162],"a":[51,74,110],"high":[52],"degree":[53],"accuracy.":[55],"However,":[56,151],"they":[57],"lack":[58],"ability":[60],"correctly.":[68],"In":[69],"this":[70],"study":[71],"we":[72],"investigated":[73],"neural":[75,124,134],"embedding":[76,135],"approach":[77,136],"mapping":[79],"Unified":[84],"Medical":[85],"Language":[86],"System":[87],"(UMLS)":[88],"Metathesaurus'":[89],"Concept":[90],"Unique":[91],"Identifier":[92],"(CUIs).":[93],"A":[94],"vector":[95,127],"store":[96],"containing":[97],"embeddings":[99,125],"57819":[101],"corresponding":[105],"CUIs":[106],"was":[107,118],"created,":[108],"collection":[111],"annotated":[113],"COVID-19":[114],"signs":[115],"symptoms":[117],"tested":[119],"on":[120],"3":[121],"combinations":[122],"stores.":[128],"The":[129],"results":[130],"show":[131],"that":[132],"does":[137],"significantly":[138],"outperform":[139],"baseline":[141],"string":[142],"match":[143],"method":[144],"by":[145],">200%,":[146],"which":[147],"very":[149],"encouraging.":[150],"its":[152],"performance":[153],"will":[154],"need":[155],"be":[157],"further":[158],"improved":[159],"for":[160],"(LLMs).":[166]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}