{"id":"https://openalex.org/W4413040084","doi":"https://doi.org/10.3233/shti250839","title":"Automating Precision Oncology Literature Curation: A Decision Tree Approach Using Large Language Models","display_name":"Automating Precision Oncology Literature Curation: A Decision Tree Approach Using Large Language Models","publication_year":2025,"publication_date":"2025-08-07","ids":{"openalex":"https://openalex.org/W4413040084","doi":"https://doi.org/10.3233/shti250839","pmid":"https://pubmed.ncbi.nlm.nih.gov/40775857"},"language":"en","primary_location":{"id":"doi:10.3233/shti250839","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250839","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.3233/shti250839","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051679566","display_name":"Frank Lin","orcid":"https://orcid.org/0000-0001-9250-6874"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]},{"id":"https://openalex.org/I42131985","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70","country_code":"AU","type":"government","lineage":["https://openalex.org/I2801453606","https://openalex.org/I3149551504","https://openalex.org/I42131985"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Frank P. Lin","raw_affiliation_strings":["Faculty of Medicine and Health, UNSW Sydney, Australia","Garvan Institute of Medical Research, Sydney, Australia","NHMRC Clinical Trials Centre, University of Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Sydney, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"NHMRC Clinical Trials Centre, University of Sydney, Australia","institution_ids":["https://openalex.org/I129604602","https://openalex.org/I42131985"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101991810","display_name":"Minh Ngoc Tran","orcid":"https://orcid.org/0000-0003-4600-8211"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Minh Tran","raw_affiliation_strings":["Faculty of Medicine and Health, UNSW Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056579841","display_name":"Subotheni Thavaneswaran","orcid":"https://orcid.org/0000-0002-8946-6709"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]},{"id":"https://openalex.org/I4210153363","display_name":"The Kinghorn Cancer Centre","ror":"https://ror.org/04fw0fr46","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I4210153363"]},{"id":"https://openalex.org/I42131985","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70","country_code":"AU","type":"government","lineage":["https://openalex.org/I2801453606","https://openalex.org/I3149551504","https://openalex.org/I42131985"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Subotheni Thavaneswaran","raw_affiliation_strings":["Faculty of Medicine and Health, UNSW Sydney, Australia","Garvan Institute of Medical Research, Sydney, Australia","Kinghorn Cancer Centre, St Vincent\u2019s Hospital Sydney, Australia","NHMRC Clinical Trials Centre, University of Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Sydney, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"Kinghorn Cancer Centre, St Vincent\u2019s Hospital Sydney, Australia","institution_ids":["https://openalex.org/I4210153363"]},{"raw_affiliation_string":"NHMRC Clinical Trials Centre, University of Sydney, Australia","institution_ids":["https://openalex.org/I129604602","https://openalex.org/I42131985"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052524387","display_name":"John P. Grady","orcid":"https://orcid.org/0000-0001-9667-3872"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"John P. Grady","raw_affiliation_strings":["Centre for Molecular Oncology, UNSW Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular Oncology, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082768519","display_name":"Maya Kansara","orcid":"https://orcid.org/0000-0003-1908-3574"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Maya Kansara","raw_affiliation_strings":["Centre for Molecular Oncology, UNSW Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular Oncology, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017618347","display_name":"Jeffrey Chan","orcid":"https://orcid.org/0000-0002-7849-3488"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jeffrey Chan","raw_affiliation_strings":["Faculty of Medicine and Health, UNSW Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080428614","display_name":"Mandy L. Ballinger","orcid":"https://orcid.org/0000-0002-9706-0514"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Mandy L. Ballinger","raw_affiliation_strings":["Centre for Molecular Oncology, UNSW Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular Oncology, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111656389","display_name":"John Simes","orcid":null},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I42131985","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70","country_code":"AU","type":"government","lineage":["https://openalex.org/I2801453606","https://openalex.org/I3149551504","https://openalex.org/I42131985"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"John Simes","raw_affiliation_strings":["NHMRC Clinical Trials Centre, University of Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NHMRC Clinical Trials Centre, University of Sydney, Australia","institution_ids":["https://openalex.org/I129604602","https://openalex.org/I42131985"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057483557","display_name":"David M. Thomas","orcid":"https://orcid.org/0000-0002-2527-5428"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"David M. Thomas","raw_affiliation_strings":["Centre for Molecular Oncology, UNSW Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular Oncology, UNSW Sydney, Australia","institution_ids":["https://openalex.org/I31746571"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.31799923,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"329","issue":null,"first_page":"248","last_page":"252"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9714000225067139,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9096999764442444,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/precision-oncology","display_name":"Precision oncology","score":0.6385989189147949},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6297601461410522},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.620301365852356},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.5586886405944824},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5441601276397705},{"id":"https://openalex.org/keywords/knowledge-base","display_name":"Knowledge base","score":0.5122753977775574},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48762527108192444},{"id":"https://openalex.org/keywords/decision-tree","display_name":"Decision tree","score":0.4708749055862427},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.46648672223091125},{"id":"https://openalex.org/keywords/glossary","display_name":"Glossary","score":0.46274545788764954},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3303142189979553},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.30917036533355713},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2828190326690674},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1342165172100067}],"concepts":[{"id":"https://openalex.org/C3020497934","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision oncology","level":3,"score":0.6385989189147949},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6297601461410522},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.620301365852356},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.5586886405944824},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5441601276397705},{"id":"https://openalex.org/C4554734","wikidata":"https://www.wikidata.org/wiki/Q593744","display_name":"Knowledge base","level":2,"score":0.5122753977775574},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48762527108192444},{"id":"https://openalex.org/C84525736","wikidata":"https://www.wikidata.org/wiki/Q831366","display_name":"Decision tree","level":2,"score":0.4708749055862427},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.46648672223091125},{"id":"https://openalex.org/C2780031656","wikidata":"https://www.wikidata.org/wiki/Q859161","display_name":"Glossary","level":2,"score":0.46274545788764954},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3303142189979553},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.30917036533355713},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2828190326690674},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1342165172100067},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003663","descriptor_name":"Decision Trees","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003663","descriptor_name":"Decision Trees","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti250839","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250839","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:40775857","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40775857","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti250839","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250839","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.5199999809265137}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2751417344","https://openalex.org/W4392240901","https://openalex.org/W4224251126","https://openalex.org/W4390733788","https://openalex.org/W4405421352","https://openalex.org/W4200579603","https://openalex.org/W4389462258","https://openalex.org/W4380786209","https://openalex.org/W4390969366","https://openalex.org/W3040899714"],"abstract_inverted_index":{"The":[0,55],"curation":[1,25],"of":[2,10,90,102,118,125],"precision":[3,51,145],"oncology":[4,52,69,146],"knowledge":[5,22,53,147,167],"bases":[6,148],"requires":[7],"intensive":[8],"screening":[9,49,158],"scientific":[11],"literature.":[12],"Large":[13],"Language":[14],"Models":[15],"(LLMs)":[16],"offer":[17],"potential":[18],"to":[19,46,60],"assist":[20],"with":[21],"extraction":[23],"and":[24,132,135,154],"through":[26],"automated":[27],"abstract":[28],"screening,":[29],"though":[30],"their":[31],"utility":[32],"in":[33,72,97,114],"this":[34],"context":[35],"remains":[36],"unexplored.":[37],"We":[38],"developed":[39],"a":[40,111,162],"decision":[41],"tree-based":[42],"pipeline":[43,85,140],"utilising":[44],"LLMs":[45],"automate":[47],"literature":[48,142],"for":[50,144,149,165],"bases.":[54],"system":[56],"employs":[57],"structured":[58],"prompts":[59],"evaluate":[61],"biomarker-therapeutic":[62],"relationships":[63],"across":[64],"8,012":[65],"abstracts":[66,121],"from":[67],"25":[68],"journals":[70],"published":[71],"2024.":[73],"Performance":[74],"was":[75],"assessed":[76],"against":[77],"expert":[78],"review":[79],"using":[80],"standard":[81],"evaluation":[82],"metrics;":[83],"the":[84],"achieved":[86],"an":[87],"overall":[88],"accuracy":[89],"92.9%":[91],"(sensitivity":[92],"[recall]":[93],"87.1%,":[94],"specificity":[95,153],"93.7%)":[96],"shortlisting":[98],"1,328":[99],"candidate":[100],"abstracts,":[101],"which":[103],"888":[104],"are":[105],"considered":[106],"relevant":[107,136],"by":[108],"experts,":[109],"delivering":[110],"5.26-fold":[112],"enrichment":[113],"classification":[115],"precision.":[116],"Analysis":[117],"correctly":[119],"identified":[120],"revealed":[122],"comprehensive":[123],"coverage":[124],"key":[126],"molecular":[127],"targets,":[128],"drug":[129],"classes":[130],"(immunotherapies":[131],"targeted":[133],"therapies),":[134],"cancer":[137],"types.":[138],"This":[139],"automates":[141],"triage":[143],"relevance,":[150],"maintaining":[151],"high":[152],"potentially":[155],"reducing":[156],"manual":[157],"burden":[159],"whilst":[160],"offering":[161],"scalable":[163],"framework":[164],"sustainable":[166],"base":[168],"maintenance.":[169]},"counts_by_year":[],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
