{"id":"https://openalex.org/W4413040271","doi":"https://doi.org/10.3233/shti250796","title":"Mapping ICD-10 Codes for Oncology Diseases to OncoTree: Lessons Learned","display_name":"Mapping ICD-10 Codes for Oncology Diseases to OncoTree: Lessons Learned","publication_year":2025,"publication_date":"2025-08-07","ids":{"openalex":"https://openalex.org/W4413040271","doi":"https://doi.org/10.3233/shti250796","pmid":"https://pubmed.ncbi.nlm.nih.gov/40775814"},"language":"en","primary_location":{"id":"doi:10.3233/shti250796","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250796","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.3233/shti250796","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021967578","display_name":"Tessa Ohlsen","orcid":"https://orcid.org/0000-0001-9775-0657"},"institutions":[{"id":"https://openalex.org/I4210112713","display_name":"University Hospital Schleswig-Holstein","ror":"https://ror.org/01tvm6f46","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210112713"]},{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tessa Ohlsen","raw_affiliation_strings":["Institute for Medical Informatics, University of Luebeck, Luebeck, Germany","Institute of Medical Biometric and Statistics, Section for Clinical Research IT, University of Luebeck and University Hospital Schleswig-Holstein, Luebeck, Germany"],"raw_orcid":"https://orcid.org/0000-0001-9775-0657","affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, University of Luebeck, Luebeck, Germany","institution_ids":["https://openalex.org/I9341345"]},{"raw_affiliation_string":"Institute of Medical Biometric and Statistics, Section for Clinical Research IT, University of Luebeck and University Hospital Schleswig-Holstein, Luebeck, Germany","institution_ids":["https://openalex.org/I9341345","https://openalex.org/I4210112713"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055912652","display_name":"Anke Neumann","orcid":"https://orcid.org/0000-0002-6697-8023"},"institutions":[{"id":"https://openalex.org/I4210112713","display_name":"University Hospital Schleswig-Holstein","ror":"https://ror.org/01tvm6f46","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210112713"]},{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Anke Neumann","raw_affiliation_strings":["Institute for Medical Informatics, University of Luebeck, Luebeck, Germany","Institute of Medical Biometric and Statistics, Section for Clinical Research IT, University of Luebeck and University Hospital Schleswig-Holstein, Luebeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, University of Luebeck, Luebeck, Germany","institution_ids":["https://openalex.org/I9341345"]},{"raw_affiliation_string":"Institute of Medical Biometric and Statistics, Section for Clinical Research IT, University of Luebeck and University Hospital Schleswig-Holstein, Luebeck, Germany","institution_ids":["https://openalex.org/I9341345","https://openalex.org/I4210112713"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074605677","display_name":"Josef Ingenerf","orcid":"https://orcid.org/0000-0002-3274-8422"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Josef Ingenerf","raw_affiliation_strings":["Institute for Medical Informatics, University of Luebeck, Luebeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, University of Luebeck, Luebeck, Germany","institution_ids":["https://openalex.org/I9341345"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077283446","display_name":"Niklas Reimer","orcid":"https://orcid.org/0000-0002-0491-3929"},"institutions":[{"id":"https://openalex.org/I4210092939","display_name":"Institute for Integrative and Experimental Genomics","ror":"https://ror.org/00fy7kr67","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210092939"]},{"id":"https://openalex.org/I4210112713","display_name":"University Hospital Schleswig-Holstein","ror":"https://ror.org/01tvm6f46","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210112713"]},{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Niklas Reimer","raw_affiliation_strings":["Medical Data Integration Center, University Hospital Schleswig-Holstein, Germany","Medical Systems Biology Group, L\u00fcbeck Institute of Experimental Dermatology, University of Luebeck, Luebeck, Germany","University Cancer Center Schleswig-Holstein, University Hospital Schleswig-Holstein, Luebeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Data Integration Center, University Hospital Schleswig-Holstein, Germany","institution_ids":["https://openalex.org/I4210112713","https://openalex.org/I9341345"]},{"raw_affiliation_string":"Medical Systems Biology Group, L\u00fcbeck Institute of Experimental Dermatology, University of Luebeck, Luebeck, Germany","institution_ids":["https://openalex.org/I9341345","https://openalex.org/I4210092939"]},{"raw_affiliation_string":"University Cancer Center Schleswig-Holstein, University Hospital Schleswig-Holstein, Luebeck, Germany","institution_ids":["https://openalex.org/I4210112713","https://openalex.org/I9341345"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.3410906,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"329","issue":null,"first_page":"32","last_page":"36"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9800999760627747,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.906869649887085},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5796875953674316},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5630995035171509},{"id":"https://openalex.org/keywords/systematized-nomenclature-of-medicine","display_name":"Systematized Nomenclature of Medicine","score":0.554474949836731},{"id":"https://openalex.org/keywords/icd-10","display_name":"ICD-10","score":0.48187097907066345},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.44561082124710083},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4180735945701599},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.35999980568885803},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.3520873785018921},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.1254812777042389}],"concepts":[{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.906869649887085},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5796875953674316},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5630995035171509},{"id":"https://openalex.org/C44681071","wikidata":"https://www.wikidata.org/wiki/Q4048820","display_name":"Systematized Nomenclature of Medicine","level":4,"score":0.554474949836731},{"id":"https://openalex.org/C2781116378","wikidata":"https://www.wikidata.org/wiki/Q45127","display_name":"ICD-10","level":2,"score":0.48187097907066345},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.44561082124710083},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4180735945701599},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.35999980568885803},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.3520873785018921},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.1254812777042389},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti250796","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250796","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:40775814","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40775814","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti250796","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250796","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2581432157","https://openalex.org/W983237315","https://openalex.org/W4386159309","https://openalex.org/W4295077997","https://openalex.org/W4384914659","https://openalex.org/W2419080317","https://openalex.org/W328302119","https://openalex.org/W2244353837","https://openalex.org/W239564604","https://openalex.org/W2942046592"],"abstract_inverted_index":{"Despite":[0,93],"the":[1,8,74,84,87,95,113],"existence":[2],"of":[3,86,101],"ICD-O":[4],"for":[5,40],"tumor":[6,25],"classification,":[7],"broader":[9],"ICD-10":[10,51,67],"system":[11],"is":[12,19,104],"often":[13],"used":[14],"in":[15,21,83],"practice.":[16],"While":[17],"OncoTree":[18,53,69],"significant":[20],"research":[22],"and":[23,36,44,52,68,90],"molecular":[24,35],"boards,":[26],"it":[27],"provides":[28],"a":[29,48],"more":[30],"detailed":[31],"classification":[32],"based":[33],"on":[34,111],"histological":[37],"characteristics,":[38],"crucial":[39],"clinical":[41],"trial":[42],"enrollment":[43],"data":[45],"comparison.":[46],"Therefore,":[47],"mapping":[49,57,75,114],"between":[50],"was":[54],"developed.":[55],"The":[56],"uses":[58],"SNOMED":[59],"CT":[60],"as":[61,81],"an":[62,98],"intermediary":[63],"step":[64],"because":[65],"both":[66],"are":[70],"structured":[71],"differently.":[72],"During":[73],"process,":[76],"some":[77],"challenges":[78],"arose,":[79],"such":[80],"differences":[82],"structure":[85],"coding":[88],"systems":[89],"inaccurate":[91],"mappings.":[92],"this,":[94],"approach":[96],"achieved":[97],"accuracy":[99],"rate":[100],"86.18%,":[102],"which":[103],"considered":[105],"satisfactory.":[106],"Future":[107],"efforts":[108],"will":[109],"focus":[110],"refining":[112],"process":[115],"to":[116],"enhance":[117],"its":[118],"integration":[119],"into":[120],"production":[121],"systems.":[122]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
