{"id":"https://openalex.org/W4410447775","doi":"https://doi.org/10.3233/shti250483","title":"Automating Performance Status Annotation in Oncology Using Llama-3","display_name":"Automating Performance Status Annotation in Oncology Using Llama-3","publication_year":2025,"publication_date":"2025-05-15","ids":{"openalex":"https://openalex.org/W4410447775","doi":"https://doi.org/10.3233/shti250483","pmid":"https://pubmed.ncbi.nlm.nih.gov/40380591"},"language":"en","primary_location":{"id":"doi:10.3233/shti250483","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250483","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250483","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250483","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5117573274","display_name":"Irene Cara","orcid":"https://orcid.org/0000-0003-3396-2532"},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]},{"id":"https://openalex.org/I4210151833","display_name":"Amsterdam University Medical Centers","ror":"https://ror.org/05grdyy37","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Irene Cara","raw_affiliation_strings":["Amsterdam UMC, Department of Medical Oncology, Amsterdam","Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht"],"raw_orcid":"https://orcid.org/0000-0003-3396-2532","affiliations":[{"raw_affiliation_string":"Amsterdam UMC, Department of Medical Oncology, Amsterdam","institution_ids":["https://openalex.org/I4210151833"]},{"raw_affiliation_string":"Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht","institution_ids":["https://openalex.org/I4210142067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5117573275","display_name":"Nynke van \u2019t Hof","orcid":null},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]},{"id":"https://openalex.org/I4210151833","display_name":"Amsterdam University Medical Centers","ror":"https://ror.org/05grdyy37","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833"]},{"id":"https://openalex.org/I865915315","display_name":"Vrije Universiteit Amsterdam","ror":"https://ror.org/008xxew50","country_code":"NL","type":"education","lineage":["https://openalex.org/I865915315"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Nynke van \u2019t Hof","raw_affiliation_strings":["Amsterdam UMC, Department of Medical Oncology, Amsterdam","Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht","Vrije Universiteit, Department of Computational Lexicology, Amsterdam"],"raw_orcid":"https://orcid.org/0009-0003-7511-1979","affiliations":[{"raw_affiliation_string":"Amsterdam UMC, Department of Medical Oncology, Amsterdam","institution_ids":["https://openalex.org/I4210151833"]},{"raw_affiliation_string":"Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht","institution_ids":["https://openalex.org/I4210142067"]},{"raw_affiliation_string":"Vrije Universiteit, Department of Computational Lexicology, Amsterdam","institution_ids":["https://openalex.org/I865915315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061695000","display_name":"Sebastiaan Siegerink","orcid":"https://orcid.org/0009-0000-3692-844X"},"institutions":[{"id":"https://openalex.org/I4210151833","display_name":"Amsterdam University Medical Centers","ror":"https://ror.org/05grdyy37","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Sebastiaan Siegerink","raw_affiliation_strings":["Amsterdam UMC, Department of Medical Oncology, Amsterdam"],"raw_orcid":"https://orcid.org/0009-0000-3692-844X","affiliations":[{"raw_affiliation_string":"Amsterdam UMC, Department of Medical Oncology, Amsterdam","institution_ids":["https://openalex.org/I4210151833"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042376663","display_name":"Linde M. Veen","orcid":"https://orcid.org/0000-0003-0416-4013"},"institutions":[{"id":"https://openalex.org/I4210151833","display_name":"Amsterdam University Medical Centers","ror":"https://ror.org/05grdyy37","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Linde Veen","raw_affiliation_strings":["Amsterdam UMC, Department of Medical Oncology, Amsterdam"],"raw_orcid":"https://orcid.org/0000-0003-0416-4013","affiliations":[{"raw_affiliation_string":"Amsterdam UMC, Department of Medical Oncology, Amsterdam","institution_ids":["https://openalex.org/I4210151833"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056442086","display_name":"Gijs Geleijnse","orcid":"https://orcid.org/0000-0002-0947-8970"},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Gijs Geleijnse","raw_affiliation_strings":["Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht"],"raw_orcid":"https://orcid.org/0000-0002-0947-8970","affiliations":[{"raw_affiliation_string":"Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht","institution_ids":["https://openalex.org/I4210142067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106665758","display_name":"Hanneke W. M. van Laarhoven","orcid":"https://orcid.org/0000-0003-3546-9709"},"institutions":[{"id":"https://openalex.org/I4210151833","display_name":"Amsterdam University Medical Centers","ror":"https://ror.org/05grdyy37","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Hanneke van Laarhoven","raw_affiliation_strings":["Amsterdam UMC, Department of Medical Oncology, Amsterdam"],"raw_orcid":"https://orcid.org/0000-0003-3546-9709","affiliations":[{"raw_affiliation_string":"Amsterdam UMC, Department of Medical Oncology, Amsterdam","institution_ids":["https://openalex.org/I4210151833"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003532820","display_name":"Rob H.A. Verhoeven","orcid":"https://orcid.org/0000-0001-9678-1611"},"institutions":[{"id":"https://openalex.org/I4210142067","display_name":"Netherlands Comprehensive Cancer Organisation","ror":"https://ror.org/03g5hcd33","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210142067"]},{"id":"https://openalex.org/I4210151833","display_name":"Amsterdam University Medical Centers","ror":"https://ror.org/05grdyy37","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Rob Verhoeven","raw_affiliation_strings":["Amsterdam UMC, Department of Medical Oncology, Amsterdam","Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht"],"raw_orcid":"https://orcid.org/0000-0001-9678-1611","affiliations":[{"raw_affiliation_string":"Amsterdam UMC, Department of Medical Oncology, Amsterdam","institution_ids":["https://openalex.org/I4210151833"]},{"raw_affiliation_string":"Netherlands Comprehensive Cancer Organisation (IKNL), Utrecht","institution_ids":["https://openalex.org/I4210142067"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.2275664,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"327","issue":null,"first_page":"868","last_page":"869"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.8456000089645386,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.8456000089645386,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11396","display_name":"Artificial Intelligence in Healthcare","score":0.829200029373169,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.751800000667572,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7815941572189331},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4906836748123169},{"id":"https://openalex.org/keywords/precision-oncology","display_name":"Precision oncology","score":0.45696088671684265},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.33711957931518555},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.33531516790390015},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.32548290491104126},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.2570655941963196},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2213151752948761},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.07734847068786621}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7815941572189331},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4906836748123169},{"id":"https://openalex.org/C3020497934","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision oncology","level":3,"score":0.45696088671684265},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.33711957931518555},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.33531516790390015},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.32548290491104126},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.2570655941963196},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2213151752948761},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.07734847068786621}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004938","descriptor_name":"Esophageal Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D004938","descriptor_name":"Esophageal Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009426","descriptor_name":"Netherlands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009426","descriptor_name":"Netherlands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.3233/shti250483","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250483","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250483","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:40380591","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40380591","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":"Journal Article"},{"id":"pmh:oai:pure.amsterdamumc.nl:openaire_cris_publications/6be20402-ff35-42b9-821c-563db98e58b5","is_oa":true,"landing_page_url":"https://pure.amsterdamumc.nl/en/publications/6be20402-ff35-42b9-821c-563db98e58b5","pdf_url":"https://pure.amsterdamumc.nl/files/142002366/Automating-performance-status-annotation-in-oncology-using-llama-3.pdf","source":{"id":"https://openalex.org/S7407055222","display_name":"Pure Amsterdam UMC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Cara, I, van 't Hof, N, Siegerink, S, Veen, L, Geleijnse, G, van Laarhoven, H & Verhoeven, R 2025, 'Automating Performance Status Annotation in Oncology Using Llama-3', Studies in health technology and informatics, vol. 327, pp. 868-869. https://doi.org/10.3233/SHTI250483","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.3233/shti250483","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250483","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250483","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410447775.pdf","grobid_xml":"https://content.openalex.org/works/W4410447775.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W4389568370","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W1506200166","https://openalex.org/W1489783725"],"abstract_inverted_index":{"This":[0],"work":[1,52],"explores":[2],"the":[3,29,48,57],"automated":[4],"extraction":[5,30],"of":[6,19,31,34],"medical":[7],"information":[8],"from":[9],"Dutch":[10],"clinical":[11],"notes":[12],"using":[13],"Llama-3":[14],"and":[15,25,42],"a":[16],"limited":[17],"amount":[18],"annotations.":[20],"We":[21],"compared":[22],"zero-,":[23],"one-":[24],"few-shot":[26,40],"learning":[27,41],"for":[28],"performance":[32],"status":[33],"patients":[35],"with":[36,44],"palliative":[37],"esophagogastric":[38],"cancer":[39],"one-shot":[43],"ACSESS-selected":[45],"examples,":[46],"showed":[47],"best":[49],"performance.":[50],"Future":[51],"shall":[53],"focus":[54],"on":[55],"improving":[56],"model's":[58],"precision.":[59]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
