{"id":"https://openalex.org/W4410447751","doi":"https://doi.org/10.3233/shti250424","title":"mdm2neo4j: Generating Graph Representations of Medical Data Models","display_name":"mdm2neo4j: Generating Graph Representations of Medical Data Models","publication_year":2025,"publication_date":"2025-05-15","ids":{"openalex":"https://openalex.org/W4410447751","doi":"https://doi.org/10.3233/shti250424","pmid":"https://pubmed.ncbi.nlm.nih.gov/40380533"},"language":"en","primary_location":{"id":"doi:10.3233/shti250424","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250424","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250424","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250424","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015671963","display_name":"Lea G\u00fctebier","orcid":"https://orcid.org/0000-0001-5504-5108"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lea G\u00fctebier","raw_affiliation_strings":["Medical Informatics Laboratory, University Medicine Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0001-5504-5108","affiliations":[{"raw_affiliation_string":"Medical Informatics Laboratory, University Medicine Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087461525","display_name":"Benjamin Winter","orcid":"https://orcid.org/0000-0003-1632-4328"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Benjamin Winter","raw_affiliation_strings":["Medical Informatics Laboratory, University Medicine Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0003-1632-4328","affiliations":[{"raw_affiliation_string":"Medical Informatics Laboratory, University Medicine Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038485965","display_name":"Max Blumenstock","orcid":"https://orcid.org/0000-0002-9816-0445"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Max Blumenstock","raw_affiliation_strings":["Institute of Medical Informatics, Heidelberg University Hospital, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9816-0445","affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Heidelberg University Hospital, Germany","institution_ids":["https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076375776","display_name":"Christian Niklas","orcid":"https://orcid.org/0000-0002-8887-0996"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christian Niklas","raw_affiliation_strings":["Institute of Medical Informatics, Heidelberg University Hospital, Germany"],"raw_orcid":"https://orcid.org/0000-0002-8887-0996","affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Heidelberg University Hospital, Germany","institution_ids":["https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002071945","display_name":"Martin Dugas","orcid":"https://orcid.org/0000-0001-9740-0788"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Dugas","raw_affiliation_strings":["Institute of Medical Informatics, Heidelberg University Hospital, Germany"],"raw_orcid":"https://orcid.org/0000-0001-9740-0788","affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, Heidelberg University Hospital, Germany","institution_ids":["https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103188993","display_name":"Dagmar Waltemath","orcid":"https://orcid.org/0000-0002-5886-5563"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dagmar Waltemath","raw_affiliation_strings":["Medical Informatics Laboratory, University Medicine Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0002-5886-5563","affiliations":[{"raw_affiliation_string":"Medical Informatics Laboratory, University Medicine Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029731037","display_name":"Ron Henkel","orcid":"https://orcid.org/0000-0001-6211-2719"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ron Henkel","raw_affiliation_strings":["Medical Informatics Laboratory, University Medicine Greifswald, Germany"],"raw_orcid":"https://orcid.org/0000-0001-6211-2719","affiliations":[{"raw_affiliation_string":"Medical Informatics Laboratory, University Medicine Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":8.0927,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.97039106,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":97},"biblio":{"volume":"327","issue":null,"first_page":"627","last_page":"631"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12292","display_name":"Graph Theory and Algorithms","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12292","display_name":"Graph Theory and Algorithms","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9775000214576721,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.9024052619934082},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7827543020248413},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.6549068093299866},{"id":"https://openalex.org/keywords/graph-database","display_name":"Graph database","score":0.6341084241867065},{"id":"https://openalex.org/keywords/data-element","display_name":"Data element","score":0.5677552223205566},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5250746607780457},{"id":"https://openalex.org/keywords/metadata-repository","display_name":"Metadata repository","score":0.4413600265979767},{"id":"https://openalex.org/keywords/data-mapping","display_name":"Data mapping","score":0.44131559133529663},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4213344156742096},{"id":"https://openalex.org/keywords/metadata-management","display_name":"Metadata management","score":0.416703462600708},{"id":"https://openalex.org/keywords/metadata-modeling","display_name":"Metadata modeling","score":0.41254910826683044},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.31023746728897095},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2963353991508484},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.15839049220085144},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14355850219726562}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.9024052619934082},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7827543020248413},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.6549068093299866},{"id":"https://openalex.org/C176225458","wikidata":"https://www.wikidata.org/wiki/Q595971","display_name":"Graph database","level":3,"score":0.6341084241867065},{"id":"https://openalex.org/C30872290","wikidata":"https://www.wikidata.org/wiki/Q1172389","display_name":"Data element","level":3,"score":0.5677552223205566},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5250746607780457},{"id":"https://openalex.org/C153048206","wikidata":"https://www.wikidata.org/wiki/Q3454922","display_name":"Metadata repository","level":3,"score":0.4413600265979767},{"id":"https://openalex.org/C137314826","wikidata":"https://www.wikidata.org/wiki/Q2330408","display_name":"Data mapping","level":2,"score":0.44131559133529663},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4213344156742096},{"id":"https://openalex.org/C2779489174","wikidata":"https://www.wikidata.org/wiki/Q6822246","display_name":"Metadata management","level":3,"score":0.416703462600708},{"id":"https://openalex.org/C110326360","wikidata":"https://www.wikidata.org/wiki/Q17149476","display_name":"Metadata modeling","level":4,"score":0.41254910826683044},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.31023746728897095},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2963353991508484},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.15839049220085144},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14355850219726562}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti250424","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250424","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250424","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:40380533","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40380533","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.3233/shti250424","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti250424","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI250424","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1818531448","display_name":null,"funder_award_id":"FKZ01KX2121","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G3806456426","display_name":null,"funder_award_id":"DU 352/14-4","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G750904052","display_name":null,"funder_award_id":"01KX2121","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410447751.pdf","grobid_xml":"https://content.openalex.org/works/W4410447751.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3084772717","https://openalex.org/W3199469221","https://openalex.org/W4399418670","https://openalex.org/W3198210148","https://openalex.org/W4387914223","https://openalex.org/W2368830475","https://openalex.org/W2372299323","https://openalex.org/W3198863654","https://openalex.org/W3016309384","https://openalex.org/W3199626854"],"abstract_inverted_index":{"Medical":[0,36],"sciences":[1],"generate":[2],"and":[3,29,111,121],"collect":[4],"large":[5],"amounts":[6],"of":[7,69,97,128,132],"data.":[8],"To":[9],"advance":[10],"patient":[11],"care,":[12],"it":[13],"is":[14,24,101,125],"necessary":[15],"to":[16],"analyse":[17],"the":[18,45,66,87,98,129],"data":[19,28,42,70,137],"at":[20],"hand.":[21],"This":[22],"however":[23],"only":[25],"possible":[26],"if":[27],"metadata":[30,55,85,100,109,116],"are":[31],"findable.":[32],"The":[33,123],"Portal":[34],"for":[35,58],"Data":[37,48],"Models":[38],"provides":[39],"reusable":[40],"medical":[41],"forms":[43,71],"in":[44,60,135],"CDISC":[46],"Operational":[47],"Model":[49],"format,":[50],"thereby":[51],"making":[52],"numerous":[53],"structural":[54],"sets":[56,110],"available":[57],"reuse":[59],"a":[61,73,79,91],"standardised":[62],"format.":[63],"However,":[64],"exploring":[65],"growing":[67],"collection":[68],"remains":[72],"challenge.":[74],"Here,":[75],"we":[76],"present":[77],"mdm2neo4j,":[78],"software":[80],"tool":[81],"that":[82],"transforms":[83],"ODM":[84,99,115],"from":[86],"MDM":[88],"portal":[89],"into":[90],"neo4j":[92],"graph.":[93],"Thereby,":[94],"graph-based":[95],"exploration":[96],"enabled":[102],"together":[103],"with":[104],"complex":[105],"queries":[106],"across":[107],"linked":[108],"efficient":[112],"syntax":[113],"checking.":[114],"becomes":[117],"easily":[118],"explorable,":[119],"findable":[120],"retrievable.":[122],"mdm2neo4j":[124],"one":[126],"example":[127],"increasing":[130],"use":[131],"graph":[133],"databases":[134],"health":[136],"management.":[138]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
