{"id":"https://openalex.org/W4401824781","doi":"https://doi.org/10.3233/shti240749","title":"Automatic Extraction of Medication Data from Semi-Structured Prescriptions","display_name":"Automatic Extraction of Medication Data from Semi-Structured Prescriptions","publication_year":2024,"publication_date":"2024-08-22","ids":{"openalex":"https://openalex.org/W4401824781","doi":"https://doi.org/10.3233/shti240749","pmid":"https://pubmed.ncbi.nlm.nih.gov/39176536"},"language":"en","primary_location":{"id":"doi:10.3233/shti240749","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti240749","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240749","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240749","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031971799","display_name":"Johannes Oehm","orcid":"https://orcid.org/0000-0003-4240-1809"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Johannes Benedict Oehm","raw_affiliation_strings":["Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106681820","display_name":"Oliver Wenning","orcid":null},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oliver Wenning","raw_affiliation_strings":["Department of Computer Science, University of M\u00fcnster, M\u00fcnster, Germany","Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]},{"raw_affiliation_string":"Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057156197","display_name":"Michael Storck","orcid":"https://orcid.org/0000-0002-8160-0184"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Storck","raw_affiliation_strings":["Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022183918","display_name":"Xiaoyi Jiang","orcid":"https://orcid.org/0000-0001-7678-9528"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Xiaoyi Jiang","raw_affiliation_strings":["Department of Computer Science, University of M\u00fcnster, M\u00fcnster, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033176798","display_name":"Julian Varghese","orcid":"https://orcid.org/0000-0002-7206-3719"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Julian Varghese","raw_affiliation_strings":["Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5031971799"],"corresponding_institution_ids":["https://openalex.org/I22465464"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.29771407,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"316","issue":null,"first_page":"1694","last_page":"1698"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9478999972343445,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9478999972343445,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13523","display_name":"Mathematics, Computing, and Information Processing","score":0.929099977016449,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.8721570372581482},{"id":"https://openalex.org/keywords/medical-prescription","display_name":"Medical prescription","score":0.6819924116134644},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6676443219184875},{"id":"https://openalex.org/keywords/levenshtein-distance","display_name":"Levenshtein distance","score":0.6440694332122803},{"id":"https://openalex.org/keywords/text-messaging","display_name":"Text messaging","score":0.5680631995201111},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5112012028694153},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.48271796107292175},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4591142535209656},{"id":"https://openalex.org/keywords/german","display_name":"German","score":0.4414841830730438},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4243733286857605},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41986164450645447},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.419434517621994},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.32653021812438965},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3224605917930603},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.229129821062088},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.12765875458717346},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09896528720855713},{"id":"https://openalex.org/keywords/nursing","display_name":"Nursing","score":0.09802520275115967},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.08543956279754639}],"concepts":[{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.8721570372581482},{"id":"https://openalex.org/C2426938","wikidata":"https://www.wikidata.org/wiki/Q3355478","display_name":"Medical prescription","level":2,"score":0.6819924116134644},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6676443219184875},{"id":"https://openalex.org/C2777515626","wikidata":"https://www.wikidata.org/wiki/Q496939","display_name":"Levenshtein distance","level":2,"score":0.6440694332122803},{"id":"https://openalex.org/C3018949938","wikidata":"https://www.wikidata.org/wiki/Q17166101","display_name":"Text messaging","level":2,"score":0.5680631995201111},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5112012028694153},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.48271796107292175},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4591142535209656},{"id":"https://openalex.org/C154775046","wikidata":"https://www.wikidata.org/wiki/Q188","display_name":"German","level":2,"score":0.4414841830730438},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4243733286857605},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41986164450645447},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.419434517621994},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.32653021812438965},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3224605917930603},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.229129821062088},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.12765875458717346},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09896528720855713},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.09802520275115967},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.08543956279754639},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005858","descriptor_name":"Germany","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005858","descriptor_name":"Germany","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005858","descriptor_name":"Germany","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005858","descriptor_name":"Germany","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011307","descriptor_name":"Drug Prescriptions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011307","descriptor_name":"Drug Prescriptions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011307","descriptor_name":"Drug Prescriptions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011307","descriptor_name":"Drug Prescriptions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055695","descriptor_name":"Electronic Prescribing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055695","descriptor_name":"Electronic Prescribing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055695","descriptor_name":"Electronic Prescribing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055695","descriptor_name":"Electronic Prescribing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti240749","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti240749","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240749","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:39176536","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39176536","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti240749","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti240749","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240749","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.6299999952316284,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4401824781.pdf"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W1991876122","https://openalex.org/W2051434435","https://openalex.org/W2114361266","https://openalex.org/W4384918448"],"related_works":["https://openalex.org/W2356597680","https://openalex.org/W2093471820","https://openalex.org/W50079190","https://openalex.org/W2114846443","https://openalex.org/W3102147106","https://openalex.org/W2347460059","https://openalex.org/W3171947995","https://openalex.org/W1492005981","https://openalex.org/W1982302668","https://openalex.org/W3015234152"],"abstract_inverted_index":{"In":[0],"many":[1],"healthcare":[2],"facilities,":[3],"the":[4,47,79,82,86],"prescription":[5],"of":[6,50],"drugs":[7],"is":[8,21,35],"done":[9],"only":[10],"in":[11,54],"a":[12,71],"semi-structured":[13],"manner,":[14],"using":[15],"free-text":[16,52],"fields":[17,53],"where":[18],"various":[19,41,48],"information":[20],"often":[22,36],"mixed.":[23],"Therefore,":[24],"automatic":[25],"processing,":[26],"especially":[27],"for":[28],"secondary":[29],"use":[30],"such":[31],"as":[32],"research":[33],"purposes,":[34],"challenging.":[37],"This":[38],"paper":[39],"compares":[40],"approaches":[42],"that":[43,70],"identify":[44],"and":[45,61,81],"classify":[46],"parts":[49],"these":[51],"German":[55],"language,":[56],"namely":[57],"simple":[58],"Levenshtein-based,":[59],"rule-based":[60,80],"CRF":[62],"(conditional":[63],"random":[64],"field)-based":[65],"approaches.":[66],"Our":[67],"results":[68],"show":[69],"F1-score":[72],">90%":[73],"can":[74],"be":[75],"achieved":[76],"with":[77,85],"both":[78],"CRF-based":[83,87],"approach,":[84],"approach":[88],"even":[89],"reaching":[90],"nearly":[91],"95%.":[92]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
