{"id":"https://openalex.org/W4401821788","doi":"https://doi.org/10.3233/shti240425","title":"A Multi-Label Text Classifier at Publication Level Based on \u201cPubMedBERT + TextRNN\u201d for Cancer Literature","display_name":"A Multi-Label Text Classifier at Publication Level Based on \u201cPubMedBERT + TextRNN\u201d for Cancer Literature","publication_year":2024,"publication_date":"2024-08-22","ids":{"openalex":"https://openalex.org/W4401821788","doi":"https://doi.org/10.3233/shti240425","pmid":"https://pubmed.ncbi.nlm.nih.gov/39176755"},"language":"en","primary_location":{"id":"doi:10.3233/shti240425","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti240425","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240425","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240425","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100386119","display_name":"Ying Zhang","orcid":"https://orcid.org/0000-0002-3672-3345"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhang Ying","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, China"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100908221","display_name":"Xia Guang-hui","orcid":"https://orcid.org/0000-0003-4587-0344"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xia Guanghui","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, China"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Li Xiaoying","orcid":null},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Xiaoying","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, China"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5106680784","display_name":"Tang Shishi","orcid":null},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tang Shishi","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, China"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, China","institution_ids":["https://openalex.org/I200296433"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100386119"],"corresponding_institution_ids":["https://openalex.org/I200296433"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.33002037,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"316","issue":null,"first_page":"374","last_page":"375"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9739000201225281,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.7959466576576233},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.662578821182251},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5874980092048645},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4904029369354248},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.48490768671035767},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.37083667516708374},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.06730711460113525}],"concepts":[{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.7959466576576233},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.662578821182251},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5874980092048645},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4904029369354248},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.48490768671035767},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.37083667516708374},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.06730711460113525}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti240425","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti240425","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240425","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:39176755","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39176755","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti240425","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti240425","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI240425","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"score":0.5400000214576721,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4401821788.pdf"},"referenced_works_count":3,"referenced_works":["https://openalex.org/W2562251009","https://openalex.org/W3183659087","https://openalex.org/W4387357939"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W2033914206"],"abstract_inverted_index":{"There":[0,27],"is":[1,17,28,132],"a":[2,30,34,53,70,75,79,83],"rapid":[3],"growth":[4],"in":[5,10,18],"the":[6,11,42,66,90,107,113,129,141],"volume":[7],"of":[8,44,85,92,137],"data":[9],"cancer":[12,62,138],"field":[13],"and":[14,24,78,99,148],"fine-grained":[15],"classification":[16,136],"high":[19],"demand":[20],"especially":[21],"for":[22,47,58,134],"interdisciplinary":[23],"collaborative":[25],"research.":[26],"thus":[29],"need":[31],"to":[32,40,144],"establish":[33],"multi-label":[35,54],"classifier":[36,55,108,131],"with":[37,56,103,119],"higher":[38],"resolution":[39],"reduce":[41],"burden":[43],"screening":[45],"articles":[46],"clinical":[48],"relevance.":[49],"This":[50],"research":[51,63],"trains":[52],"scalability":[57],"classifying":[59],"literature":[60,139],"on":[61,112],"directly":[64],"at":[65,82,140],"publication":[67,142],"level.":[68],"Firstly,":[69],"corpus":[71],"was":[72,109],"divided":[73],"into":[74],"training":[76],"set":[77,81],"testing":[80],"ratio":[84],"7:3.":[86],"Secondly,":[87],"we":[88],"compared":[89],"performance":[91],"classifiers":[93],"developed":[94],"by":[95],"\"PubMedBERT":[96,116],"+":[97,101,117],"TextRNN\"":[98,102],"\"BioBERT":[100],"ICRP":[104],"CT.":[105],"Finally,":[106],"obtained":[110],"based":[111],"optimal":[114],"combination":[115],"TextRNN\",":[118],"P=":[120],"0.952014,":[121],"R=0.936696,":[122],"F1=0.931664.":[123],"The":[124],"quantitative":[125],"comparisons":[126],"demonstrate":[127],"that":[128],"resulting":[130],"fit":[133],"high-resolution":[135],"level":[143],"support":[145],"accurate":[146],"retrieving":[147],"academic":[149],"statistics.":[150]},"counts_by_year":[],"updated_date":"2026-03-25T23:56:10.502304","created_date":"2025-10-10T00:00:00"}
