{"id":"https://openalex.org/W4391229612","doi":"https://doi.org/10.3233/shti231035","title":"Final Report on the German Clinical Reference Corpus 3000PA","display_name":"Final Report on the German Clinical Reference Corpus 3000PA","publication_year":2024,"publication_date":"2024-01-25","ids":{"openalex":"https://openalex.org/W4391229612","doi":"https://doi.org/10.3233/shti231035","pmid":"https://pubmed.ncbi.nlm.nih.gov/38269879"},"language":"en","primary_location":{"id":"doi:10.3233/shti231035","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3233/shti231035","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI231035","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI231035","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044841280","display_name":"Udo Hahn","orcid":"https://orcid.org/0000-0002-5052-0245"},"institutions":[{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Udo Hahn","raw_affiliation_strings":["Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany","institution_ids":["https://openalex.org/I76198965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029707385","display_name":"Luise Modersohn","orcid":"https://orcid.org/0000-0002-8258-4366"},"institutions":[{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Luise Modersohn","raw_affiliation_strings":["Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany","Medizinische Informatik, TU M\u00fcnchen, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany","institution_ids":["https://openalex.org/I76198965"]},{"raw_affiliation_string":"Medizinische Informatik, TU M\u00fcnchen, M\u00fcnchen, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103019022","display_name":"Jakob Faller","orcid":"https://orcid.org/0009-0002-8875-5426"},"institutions":[{"id":"https://openalex.org/I4210134900","display_name":"Jena University Hospital","ror":"https://ror.org/035rzkx15","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210134900"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jakob Faller","raw_affiliation_strings":["Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany","Universit\u00e4tsklinikum Jena, Jena, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany","institution_ids":["https://openalex.org/I76198965"]},{"raw_affiliation_string":"Universit\u00e4tsklinikum Jena, Jena, Germany","institution_ids":["https://openalex.org/I4210134900"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042587817","display_name":"Christina Lohr","orcid":"https://orcid.org/0000-0001-9889-162X"},"institutions":[{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]},{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christina Lohr","raw_affiliation_strings":["Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Universit\u00e4t Leipzig, Leipzig, Germany","Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Universit\u00e4t Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]},{"raw_affiliation_string":"Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Jena, Germany","institution_ids":["https://openalex.org/I76198965"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044841280"],"corresponding_institution_ids":["https://openalex.org/I76198965"],"apc_list":null,"apc_paid":null,"fwci":8.7974,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.96152067,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"310","issue":null,"first_page":"599","last_page":"603"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12664","display_name":"Clinical practice guidelines implementation","score":0.97079998254776,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12664","display_name":"Clinical practice guidelines implementation","score":0.97079998254776,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9433000087738037,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7596262693405151},{"id":"https://openalex.org/keywords/german","display_name":"German","score":0.7557826042175293},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7026671171188354},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5754239559173584},{"id":"https://openalex.org/keywords/negation","display_name":"Negation","score":0.491506427526474},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.48526737093925476},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.4691775143146515},{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.4467061460018158},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.4289036989212036},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40032321214675903},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36947280168533325},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3485609292984009},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.2080416977405548},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.14001107215881348},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13263976573944092},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1223197877407074}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7596262693405151},{"id":"https://openalex.org/C154775046","wikidata":"https://www.wikidata.org/wiki/Q188","display_name":"German","level":2,"score":0.7557826042175293},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7026671171188354},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5754239559173584},{"id":"https://openalex.org/C2185349","wikidata":"https://www.wikidata.org/wiki/Q190558","display_name":"Negation","level":2,"score":0.491506427526474},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.48526737093925476},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.4691775143146515},{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.4467061460018158},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.4289036989212036},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40032321214675903},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36947280168533325},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3485609292984009},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.2080416977405548},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.14001107215881348},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13263976573944092},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1223197877407074},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti231035","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3233/shti231035","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI231035","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:38269879","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38269879","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti231035","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3233/shti231035","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI231035","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6299999952316284,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G59827103","display_name":null,"funder_award_id":"01ZZ1803G","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G6205985247","display_name":null,"funder_award_id":"01ZZ1803A","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4391229612.pdf","grobid_xml":"https://content.openalex.org/works/W4391229612.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W2402128314","https://openalex.org/W2806707051","https://openalex.org/W2942398427","https://openalex.org/W3165312278","https://openalex.org/W4292133676","https://openalex.org/W4407817855"],"related_works":["https://openalex.org/W2397677514","https://openalex.org/W1495820741","https://openalex.org/W2914293784","https://openalex.org/W3129117446","https://openalex.org/W2990177913","https://openalex.org/W1451471413","https://openalex.org/W2138729887","https://openalex.org/W2401910071","https://openalex.org/W4323056170","https://openalex.org/W2126732312"],"abstract_inverted_index":{"We":[0],"here":[1],"report":[2],"on":[3],"one":[4],"of":[5,8,23,49,62],"the":[6,14,21],"outcomes":[7],"a":[9,24,43,60],"large-scale":[10],"German":[11],"research":[12],"program,":[13],"Medical":[15],"Informatics":[16],"Initiative":[17],"(MII),":[18],"aiming":[19],"at":[20],"development":[22],"solid":[25],"data":[26],"and":[27,57,71,80,86,100,105],"software":[28],"infrastructure":[29],"for":[30],"German-language":[31],"clinical":[32,45,54],"natural":[33],"language":[34],"processing.":[35],"Within":[36],"this":[37],"framework,":[38],"we":[39],"have":[40],"developed":[41],"3000PA,":[42,103],"national":[44],"reference":[46],"corpus":[47,90],"composed":[48],"patient":[50],"records":[51],"from":[52],"three":[53,95],"university":[55],"sites":[56],"annotated":[58],"with":[59],"multitude":[61],"semantic":[63,70],"annotation":[64],"layers":[65],"(including":[66],"medical":[67],"named":[68],"entities,":[69,75],"temporal":[72],"relations":[73],"between":[74],"as":[76,78],"well":[77],"certainty":[79],"negation":[81],"information":[82],"related":[83],"to":[84],"entities":[85],"relations).":[87],"This":[88],"non-sharable":[89],"has":[91],"been":[92],"complemented":[93],"by":[94],"sharable":[96],"ones":[97],"(JSYNCC,":[98],"GGPONC,":[99],"GRASCCO).":[101],"Overall,":[102],"JSYNCC":[104],"GRASCCO":[106],"feature":[107],"about":[108],"2.1":[109],"million":[110],"metadata":[111],"points.":[112]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
