{"id":"https://openalex.org/W4377092096","doi":"https://doi.org/10.3233/shti230256","title":"Towards ETL Processes to OMOP CDM Using Metadata and Modularization","display_name":"Towards ETL Processes to OMOP CDM Using Metadata and Modularization","publication_year":2023,"publication_date":"2023-05-18","ids":{"openalex":"https://openalex.org/W4377092096","doi":"https://doi.org/10.3233/shti230256","pmid":"https://pubmed.ncbi.nlm.nih.gov/37203486"},"language":"en","primary_location":{"id":"doi:10.3233/shti230256","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3233/shti230256","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230256","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230256","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065519363","display_name":"Yuan Peng","orcid":"https://orcid.org/0000-0002-6163-9532"},"institutions":[{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4210162051","display_name":"University Hospital Carl Gustav Carus","ror":"https://ror.org/04za5zm41","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210162051"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Yuan Peng","raw_affiliation_strings":["Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065973515","display_name":"Elisa Henke","orcid":"https://orcid.org/0000-0002-5002-2676"},"institutions":[{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4210162051","display_name":"University Hospital Carl Gustav Carus","ror":"https://ror.org/04za5zm41","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210162051"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Elisa Henke","raw_affiliation_strings":["Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072891251","display_name":"Martin Sedlmayr","orcid":"https://orcid.org/0000-0002-9888-8460"},"institutions":[{"id":"https://openalex.org/I4210162051","display_name":"University Hospital Carl Gustav Carus","ror":"https://ror.org/04za5zm41","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210162051"]},{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Sedlmayr","raw_affiliation_strings":["Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I78650965"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077252997","display_name":"Franziska Bathelt","orcid":"https://orcid.org/0000-0002-4139-5489"},"institutions":[{"id":"https://openalex.org/I4210162051","display_name":"University Hospital Carl Gustav Carus","ror":"https://ror.org/04za5zm41","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210162051"]},{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Franziska Bathelt","raw_affiliation_strings":["Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I78650965"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5065519363"],"corresponding_institution_ids":["https://openalex.org/I4210162051","https://openalex.org/I78650965"],"apc_list":null,"apc_paid":null,"fwci":4.4271,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.94314144,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"302","issue":null,"first_page":"751","last_page":"752"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9664999842643738,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9664999842643738,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.947700023651123,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7805945873260498},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7588739395141602},{"id":"https://openalex.org/keywords/modular-programming","display_name":"Modular programming","score":0.6468008160591125},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6357835531234741},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5711824893951416},{"id":"https://openalex.org/keywords/data-mapping","display_name":"Data mapping","score":0.5009105205535889},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.399047315120697},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3758254945278168},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.375329852104187},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.32362157106399536},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.19281113147735596},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14593440294265747}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7805945873260498},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7588739395141602},{"id":"https://openalex.org/C88482812","wikidata":"https://www.wikidata.org/wiki/Q6453666","display_name":"Modular programming","level":2,"score":0.6468008160591125},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6357835531234741},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5711824893951416},{"id":"https://openalex.org/C137314826","wikidata":"https://www.wikidata.org/wiki/Q2330408","display_name":"Data mapping","level":2,"score":0.5009105205535889},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.399047315120697},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3758254945278168},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.375329852104187},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.32362157106399536},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.19281113147735596},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14593440294265747},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti230256","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3233/shti230256","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230256","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:37203486","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37203486","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti230256","is_oa":true,"landing_page_url":"http://dx.doi.org/10.3233/shti230256","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230256","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.44999998807907104,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4377092096.pdf","grobid_xml":"https://content.openalex.org/works/W4377092096.grobid-xml"},"referenced_works_count":1,"referenced_works":["https://openalex.org/W4309035108"],"related_works":["https://openalex.org/W1992807924","https://openalex.org/W2062427795","https://openalex.org/W2360553097","https://openalex.org/W2354642172","https://openalex.org/W2361349944","https://openalex.org/W2324261804","https://openalex.org/W2313595856","https://openalex.org/W1515308544","https://openalex.org/W2775669459","https://openalex.org/W2151972543"],"abstract_inverted_index":{"OMOP":[0,46],"common":[1],"data":[2,11,44,53],"model":[3],"(CDM)":[4],"is":[5],"designed":[6],"for":[7,15,32],"analyzing":[8],"large":[9],"clinical":[10],"and":[12,34,58],"building":[13],"cohorts":[14],"medical":[16,26],"research,":[17],"which":[18,41],"requires":[19],"Extract-Transform-Load":[20],"processes":[21],"(ETL)":[22],"of":[23,49,61],"local":[24],"heterogeneous":[25],"data.":[27],"We":[28],"present":[29],"a":[30,36],"concept":[31],"developing":[33],"evaluating":[35],"modularized":[37],"metadata-driven":[38],"ETL":[39],"process,":[40],"can":[42],"transform":[43],"into":[45],"CDM":[47],"regardless":[48],"1)":[50],"the":[51],"source":[52],"format,":[54],"2)":[55],"its":[56],"versions":[57],"3)":[59],"context":[60],"use.":[62]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2}],"updated_date":"2025-12-21T01:58:51.020947","created_date":"2025-10-10T00:00:00"}
